Dmul010372.1
Basic Information
- Insect
- Drosophila multiciliata
- Gene Symbol
- -
- Assembly
- GCA_037043605.1
- Location
- JBAMBF010000536.1:16703817-16707224[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3e-05 0.002 18.4 5.4 1 23 167 190 167 190 0.97 2 15 0.00033 0.022 15.1 2.2 1 23 242 265 242 265 0.97 3 15 0.00047 0.032 14.6 2.5 1 23 326 349 326 349 0.95 4 15 0.015 1 9.9 0.2 2 23 401 422 400 422 0.96 5 15 0.019 1.3 9.6 0.6 1 23 565 587 565 587 0.94 6 15 0.00027 0.018 15.4 2.1 1 23 594 616 594 617 0.95 7 15 0.00043 0.029 14.7 1.4 2 23 625 646 624 646 0.96 8 15 0.014 0.95 10.0 0.1 2 21 673 692 672 696 0.88 9 15 0.11 7.4 7.2 0.9 1 23 734 757 734 757 0.95 10 15 0.38 25 5.5 2.6 1 22 764 785 764 785 0.96 11 15 0.0038 0.25 11.8 0.5 2 23 795 817 794 817 0.95 12 15 1.5e-05 0.001 19.3 0.5 1 23 837 860 837 860 0.97 13 15 0.093 6.3 7.4 0.2 1 23 870 892 870 892 0.94 14 15 2.4e-05 0.0016 18.7 3.3 1 23 898 920 898 920 0.99 15 15 5e-05 0.0033 17.7 0.9 1 23 926 948 926 948 0.98
Sequence Information
- Coding Sequence
- ATGACAAGAACGTGTAGAATCTGCGGTGGCGCAGATGGACGCTTCTCGATCGAGACGCCAGTTGATAAATACGCGCAGAAAACATTTAATCACTTGCTGCTGGAGCTAACAAAACTAGAGGTCTCTGTGGATCAAGCAGATAAGCTGCCGCGATGGATTTGTCGCAACTGTGCGCACAGATTAGAGAACGCATATGACTTAGTGATGCAGGCGAAGGAAACGCACGAGCTTTGGCTGCTCAAGCTGACAACAGAGTCTCTATCGGAGGACACTGAAACTGGTACGTTGGAGTGCCTGCGAGAGACACCCATTCAATTGCTAGAGATTGAGGGCGTCACAATTAAAATGGAGGAGACATCCGAACCAGTCGTGCCCCAAACAGATTCAGTCAGCTCGATTGATCcgttaattaaaaagaacCTAGAGGATGATGCTAGCGACGATGATGATATGCCGCTCAAGAAGCGGCGGATTGCATATACAAAACTGCCGACGATGCATAGGTGCAATAAGTGCGATAAGGTGTTTAAATATGTAACGAATCTCTTTAGGCACAAGCGACGAGATCACAGTCCAAAACGCAGCCAAGCCAACAATCAAGCAGCAGTGGAGAGTGAAAAGACTGATGGCATGAAACCATTCGTAAAAGATGTAACCAAGAATTCTAGTAAAACAACACGCAGCAGCGAGGCAGACTTGGAAAGCGGATCTGAGGATGACTACTACAAGTGCGATCAATGCGACAAATCCTACAAATACATAATGCTGCTGATCAAGCACAAGCAAAAGACGCACGCTTCTAGCCAGCGTCCAGCAGAGCCCAGACCCATTAGAAAAAGCGGTTTTACAAGGATACAAGGATCTCCGTCTCAGCGTCCTAAACCGACAAGCACAGATTCCCTGGTACACAGCATCATTAAAGAAATCAACTTACCGGATGAAGAAGATGCAGACAGTTCCAGTGCCGACAATTACTACAAGTGCGATCAGTGCGACAAATCGTACAAATACATTGTGAGTCTCATCAAGCACACGCACAACGAGCACAGGGAGTACGGGGATTCCGATGAGGACGCGGATGAGGCAACATCTTCCAGATATGCAGCTGATGTCACTGCCATGTCGAAGCCCCCGCGCATTGATCGTCGCGTCAAGGGCTTTGATTTGAATCGCTGCCGGCCGAACGGTTCCAAGGAGATTCAGTGCATGATCTGTCTGCGCATATTCATCAAGTTGCGCGAACTACGCGATCACTTAAAGGCCCATCCCACAGACTTTACATTTGATGCTCATGGCGAGCCGATTGAGCGCATTGCCGAGGGCTTCTATAAAACAGCCGTAGAGTCCACCGTAGTGGGCTTGAAGCGACGCATATTTCATGATCTCAAGGTGGGCTTGCTCGGACGCTACTATTCCATAACAAACGAGGCACGCTATGAGATGAATCTGGACAGCTCGGACACGGACAGTGACGGCGAAGCGGATGTTGTGCAGCGGCATTCGTATGCCTGCGAACTGTGCGACTCCGCCGATGCGGTCTGGCCACGCAAATATCAATTGCACGAGCACCATCGGCAGCAGCATACCTGGCTGGAGGCGCCGCACGTCTGCCAGCGATGTGACTCCCGTTTTCTGAGCGCCCAACTGCTGGACCACCATACGCACAAATTGTGCCATAACACCCTGAAGCGTTTCATGTGCGACAAGTGTCCACAGCGCTTCTTCTGGCGACGCAATCTACGTGCGCATCTTGTCGAGCACAAAAACAAGCAGGAGACGTATCCGTGTGATCAGTGCTCGCGCAGTTTTCAGGACAAGAGCGCCGTGACGAAGCACAAGTTGATGCACCACGATGTCCACAACGAGCTGCTGCCCTGCCGTTGGTGCACGCGCACATTCTATCGTCCGGCGCTGTTGCACAAGCATGTGCAGCGTCATGGCTTTAGTGGGGAGGATCTGCCTCTGGCAGAGACACTGCTGGCGGATGCCGCCAAGCCATCCGGTACAAAGACGATTGTCTGCAAGTTGTGCGACATGCAGTTTATTAGCATTGCCGATCTCCGGCGACACAACTCGATGCAGGCGCACGGTGAGCAGATATCAAACTATATGATAAGCACCGAGGAGGGATTCGAGCTGCAGCTAGATGAAACGGACGAGAGTGATGAGGAACCTACGAGTACTGCTGCCAGCCGATCTTATCGGTGCGATCTGTGTGAGATGAGCTTCCTGCGAAGACGCGACATGAGCGAACATCAGTATTCGTTGCACACCTTCGACAAACTGCCACATTCCTGTGAGCATTGCATTTACAAGACAGTCGATAAGACCATGCTGGAGCACCATCTACGCACACAGTGTCTTAACgaagaaaagaaattaaagtgTTCGCGTTGCGGCTACAAATTCATGTGGCGTGAAAATTTGGAGCAACACATGAGCATTTTGCATCCCAAGTCATCATCTAGTCAGACGGCCGTTGCGGCAAAGCGAAGCCGACGTTTCCGATACCAGTGTCCACACTGCTGGCGCTCGTTTGTGGTACAGCCCAGCTTGGACAAACACATTCGGGACATGCATGTGGCGAAAAAAAATCCTGGCAAGAAGTATCTCTGCTCGCTGTGCGGCCTGGAGTCGCTTACCCCGAATAAGCTCAGCATACACATGCGGCGTCACAACGGCGAGAAGCCATTTAAATGTGATCTCTGCGATATGTCCTTCACCGTGCACTACGAACTGAAAGTCCATCGCCGCAAGCATACCGGTGAGCGACCCTATCAGTGCACATTCTGTGCCAAGGATTTTGCCCGGCCGGATAAGCTAAGACGACATGTTTACATGCATAGCGTTAAGCGTTAA
- Protein Sequence
- MTRTCRICGGADGRFSIETPVDKYAQKTFNHLLLELTKLEVSVDQADKLPRWICRNCAHRLENAYDLVMQAKETHELWLLKLTTESLSEDTETGTLECLRETPIQLLEIEGVTIKMEETSEPVVPQTDSVSSIDPLIKKNLEDDASDDDDMPLKKRRIAYTKLPTMHRCNKCDKVFKYVTNLFRHKRRDHSPKRSQANNQAAVESEKTDGMKPFVKDVTKNSSKTTRSSEADLESGSEDDYYKCDQCDKSYKYIMLLIKHKQKTHASSQRPAEPRPIRKSGFTRIQGSPSQRPKPTSTDSLVHSIIKEINLPDEEDADSSSADNYYKCDQCDKSYKYIVSLIKHTHNEHREYGDSDEDADEATSSRYAADVTAMSKPPRIDRRVKGFDLNRCRPNGSKEIQCMICLRIFIKLRELRDHLKAHPTDFTFDAHGEPIERIAEGFYKTAVESTVVGLKRRIFHDLKVGLLGRYYSITNEARYEMNLDSSDTDSDGEADVVQRHSYACELCDSADAVWPRKYQLHEHHRQQHTWLEAPHVCQRCDSRFLSAQLLDHHTHKLCHNTLKRFMCDKCPQRFFWRRNLRAHLVEHKNKQETYPCDQCSRSFQDKSAVTKHKLMHHDVHNELLPCRWCTRTFYRPALLHKHVQRHGFSGEDLPLAETLLADAAKPSGTKTIVCKLCDMQFISIADLRRHNSMQAHGEQISNYMISTEEGFELQLDETDESDEEPTSTAASRSYRCDLCEMSFLRRRDMSEHQYSLHTFDKLPHSCEHCIYKTVDKTMLEHHLRTQCLNEEKKLKCSRCGYKFMWRENLEQHMSILHPKSSSSQTAVAAKRSRRFRYQCPHCWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKLSIHMRRHNGEKPFKCDLCDMSFTVHYELKVHRRKHTGERPYQCTFCAKDFARPDKLRRHVYMHSVKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00567692;
- 90% Identity
- iTF_00570569;
- 80% Identity
- -