Dmul005748.1
Basic Information
- Insect
- Drosophila mulleri
- Gene Symbol
- -
- Assembly
- GCA_035047565.1
- Location
- JAWNPK010000048.1:3799500-3805740[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.047 3.7 8.3 0.2 1 23 1349 1372 1349 1372 0.94 2 13 7.7 5.9e+02 1.4 0.2 1 23 1537 1559 1537 1559 0.91 3 13 0.00017 0.013 16.0 2.7 2 23 1562 1583 1562 1583 0.97 4 13 3.7e-05 0.0029 18.1 0.2 3 23 1591 1611 1589 1611 0.98 5 13 5.5e-07 4.2e-05 23.9 4.1 2 23 1618 1639 1617 1639 0.97 6 13 5.2 4e+02 1.9 0.4 5 23 1652 1670 1650 1670 0.96 7 13 1.3 1e+02 3.8 5.4 3 23 1677 1698 1675 1698 0.93 8 13 0.14 11 6.9 0.2 2 23 1709 1729 1708 1729 0.96 9 13 5.3e-05 0.0041 17.6 0.4 1 19 1735 1753 1735 1757 0.95 10 13 1.5e-05 0.0012 19.3 0.5 1 23 1765 1787 1765 1787 0.98 11 13 9.9e-05 0.0076 16.8 7.6 1 23 1793 1815 1793 1816 0.96 12 13 0.00019 0.015 15.9 5.9 1 23 1821 1843 1821 1843 0.98 13 13 0.027 2.1 9.1 8.2 1 23 1849 1871 1849 1872 0.95
Sequence Information
- Coding Sequence
- ATGGTGGACAGTGTGCAGTGCCCCGTGTGCACCTTGTACCTGCACGCGGGCATGAATCTCTCCGATCATTTGGAGACACATCCCAAGGAACAGGTCATCAAGGCGCTGGTCCAAATGACCATTGTGAACAACAATGGCATGGGCAGCGCCCTGGCAGCAGCTTTGCTCTCAGGCGATGGCGCCACCAGCTCCACCTCATTGTCAGCCACGAATGCGGTTGATGTCAAACCAGTTGTACCAGCATCttcaccaccaccaccgcctccaccagcaccagcaccaccagcgacagctgcagctgtagctggagcaactaaatcaacaacagccaaagctgcgttgcccagcagcagcaacagcatcagcaatagcagctgtggcaacaacaacaacaacaaattgagcaATCCACCGATAAAGGCAGTAAAAAACGCGCCACCCTCGACTGAGGCGCCAGCCAACACATCAAACACACCCACCACAAGCAGCGTGACCGCCATCTATTCCGACTATCGCTATGAACAGCAATCCCAGCAGACGCCAGCGGCACCAACTGCGGTGCACGGCTTTGCGCGTGGTGCCACCACGCTGGTCATACCACAGGCGccacaccagcaacaacagccgcagcagcaacagcagcatcagtatCTGGCCTCACAGCAGCAGGCTGCCCACTTTGCCCAccttcagcaacagcagcagcaacagcagccggccCTGAAGTATACCTACGCAGCAgcgctgccaccgccgccacctcTGCAGCTTTTTGCGCAGCAGACGACGGCAACACAATCACATCAGAAGCCACCGCCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAGCACaaccaaaacaaacagcaacaacaacagcagcagcagcagcaacagcaacaacagcagcagcaacaacagcagcagccacaacagcaacacataaCCTTGCAACATAACATTAACCTAGCACCACCGAGTGGCAAGCATAGTAAACTCCACACGGATATCTTCCTGAatccaccgccaccgccaccgccacagccacagccacagcttaCTATTCCGTCAGCATTGTCGACTGCCTCATTAAGACTGCAATATCCGCCACAGCATCAACAGTCTcttgcagcagccagcagcagtagcagcagcaacagcggcggcggcagcagcagtagcaattATGCCGTCGCTAACTGCGCCGCTGCCAGCTCCTCGTCTGCCTTGATGTCCTCCAATACGGTTGGGCGCGCTAGCAGCAGTCGTCAGACAACCAATTCCCCATTTGGTGCGCTGCTAAATGCTGCTGCGCAAGCTGCCTGCGCCTCTCCCGCCTCGTCCAGTGCGTCCGTGCTGCGTTACGCCGAGTCGCCAGTGGCTCACTACTTGGAGCGGGAGAACGGCGACTTCATTGTCCAAGAAACTCCCAAGCACATTGTCGAGTGCGTGGAGAAGGAGGATGGCGAATTCTCGGTGATTGAGCGCATCTATCAGTCGCCGCCCAGCGTACTGCACATACACGACGATGACGAAGACGACGAAGAGGAAGACGACGAGGAGGACGACAAGGGCTGGACTAACAGCGACGCTGAGGATCACCTGAAGATGGAGGATCATGTGGAAGATGGCGACGATGAGCACGAGGATAGCCGCAGCAGAGCCTCACACAAGGCCACAACGAAAAAGTCACGCAAAGCAAAGGCGAATGGACGGAAGCACAAAAGGGCCAACAAGCATCAGTCGGACGATGAGGATGACTTCATGAGCataggcagcagctgcgccgaGAGCGAGCATCAGttggagcaacaacagcagcaggcgcagcaatCGCATGTCCCACAGGCTGCGTCGCCCGCTCCACTATCCACGGCGCCTTCGACGAGCAGtggagcagccgctgccgcgtCCTGCAGCACCAACTCGAACAAGTCGAAAAAGAATCGTGTGACCGTGCTCAGCGATGTGCCGCTCAACATGAACGAGTATCTGGATCTTGTGGGCAACATTGTGGCTTCCAGTCGAATTAGTGCCACGCGTCCATTTGCCGCTGTGGCGCCTATACCCTTGGTCAAGGTGGAGAAGGAGGAGCCCATGGATGAATACGATACCGTCAGGGATGAGATGCAGGCATGCATGGAGCAGAAGCATAGCCTGGAGCATGccactgccagcagcagcagcagcaacagtggccATGGCACCACCAGCGTCATCCGAAtggccagcaccagcagcgccGCTACCAACGCGAATGTGGCCAACGACGATCTCACGCAGCCGCCGCCCATGAAGGTGGAGGTGGAGCCGacggtgctgctgccgcaacGTTTTTCGGCGCCAGCGCAGCATCGCGGGCCCAAGAAGTTAGTCATCAAGCCAAAGGCCACAGGgacggcgtcggcgtcggcaacGACCAAAAAGACTGATAacagcgctgccagcagcagcagcggcaacggcgccagcagcagcaacagcgtcgAACCACTCAGCATATCATCGAAAGCATCTGCAGAGCCGTTGCAGATCAAGAGCGAGGCTGGGGAACATCTctccggcagcggcagcatatTGGAGAAGCATTTGACCAACAGCTACGCCGCCCAGCAGGCGCGGAAGCACTCAGCAGTCAACGACGACGATGCACGCGTGCTGCTCGAGTTTGCCAACtcgaagcagcagccgccggccggcaacagcaaccagaCCACGTTTGTGGTGAACGCGGCCAGCTTCGCCTCGGCGGGCTCCGTCTTTgctagcggcagcagcagtgtgCCGAAGCCAGCTAAGCCGGGCGACGAGTACATTCTGCCAGATAACAATCTAGAGGTGGATGAAATCGTGATATCCTCCTCGTCTTCCTATGCCTCCGACTCGCAgcacgagcagctgcagcagcagcaggcacatcagtcgcagcagcagccggcagcgCAGCAAGCTGTACAGCAATCGCAGCAGCCGTCCTCCTTTACAGATTTCAATTTCCTGTACCATCAGCATGGCGCCCCaactgtagcagcagcagcagcaacaacgacggcggcagcagcaaccactgCCTCAACCTTTGCACCATTtggcatgcaacagcagcagcagcagcagcagcagcaggtgctgcAGCATCCGCAACACGGCTCGAGCGAGGCCACCAATGCCGCCACGCTAGCCTCCTCCTCCAGTAACTCATCAGTCCTGGAACAGGATTGCTCCATGAATGCCACGTTTCGCGTGGGCAAACAGCAATCCACAATGGCCTCATGGTATCagccacagtcgcagtcgcagtcgcagccacagccacagccacagcccaGCACTTCGCACAGCTCCAATGTGGTGGAGCAGTCTAGCAATTTCATTGCCGCACTTGCGGCTGTGGAGTGCTGCAGCGTGGCAGCCGTGGACAGCGATGCGAGCGAGGCCAAGTACTTGGATCTGGACGCCTGCAAGCGGGAACAGTtaagcaatagcagcagccaCTTGCCCTCGGCCTCTGCGTCCACCACATCCTCATCCTTTGCGGCGGCCGCCACCGAGAGCAGCTTGGTGGGTGGCCTGGGCCTGAACATACGCACCGATGAGAAAATGCCCGCAAAGGGTGAAATCTCCGAGCAGGAGAGCAACTGTGACATTGAGAACTCATGGAGTCAATCGATGTACGGCGACTTGTCACAGCGATACTTTAGGAATCAGTTTGCGGATGGCTACAATCAGCAGCTGGCCGATTGGCGCCAAGATTACTATCCGGCGCAGGATCTcagtggccagcagcagccggagcgtGAGCAAAAGCGTTTTGATTTCAACGCTGTTGCTGCGGAGTATGCGCATACGGCGGGTCAACTGGATGCCTCCCCTGGCTCGACTAGAAACAATCATTTGCTGGATGCACAGCCCACCActtcctcgtcgtcgtcggcatTGCTGGCTGGTCCACCAATTGCCTCGACGTCGCGTGCTGCTGCCGAAGCGGAGGCTGTGGCCGCAGCCCTGGCGCAGCGGAAGCCGCCACGTCGCAAAATCTACAAGTGCCCGCACTGTGTGGCCATCTTCGAGAAGCTGAAGGAGCGCAACGCGCACATGATTGGCGAGCACAACTATGTGCGCCAGAATCGACGGCTCATCTGCCTCTCTTTGGTCAATAGCACCTTGGCGGGCccgcaggagcagcaggcgcagggacaacagcagcagcaacagcaccaattGCTGCAGTCCGCGGGGCACAGCAATGCCGACATTATGCATGAGGATTCCAAGGATGGCATTGTAAAGATTAAGCAGGAGCACTGCCACGATAAGCAGGATGCCTCCGAGCAACTGCTGGGCCATTCCGAGCTGCCCGACGTTAAGGACTCCGGCCTGCTCAATGGCAGCGATGAGAACGGTCGCGATGCAGACATGAAACCGCCGGCGGGCGTCACAGTCCTGGACGAGAAGCCGACCATACCGCCGCTGGCCATGACTACGCCAGCGGCCAAGCTGGCTGCTCTGTATCGCATGCTCATTGCGTACAACGAGTCCAAGCTGGGCCAGGAGCGCAACAATCTCAGCGAACTGGAGCAAAAGGCCATGGAGAAATCCATATTCCTATGCTACGTGTGTCGCACCGACTTCCCCTCTGTCAAGCTGTACGATGCTCATCTGACTGAGCATCCGGCCGAGTGTTTCACCTGTGGCAAGAAATTCTATCGCTGGAAGAACTTCTCGCTGCATCTGAAGCGTCACCTGGGCTGGAAGGAGTTTGGCTGCTACATCTGCGATAAGAAGTTCGTGGTGCGCAGCGCTCTAGTGGAGCACATGCGCATGCACACGGGCCAGACCCCGCTCAAGTGTAAGATATGCGgCAAAAAGTTCAAGCGGTATTCGAACCTAACACAGCATCGCAAGCGTCACACCAAGATCCTGGTACGCAAGAAGGAGTATGTGTGCCACTGTGGCGAGGTGTTGCCGTCTAAGGCGCGCTTCCTGTGGCACAAGGAGACGCACGACTTGAAGCCCAAGTGCTGTCCCTATTGCTGCGATCGTTTTGTGCACGCCAATTCGCTGCGCCGGCACATTCGACTGGCCCATTCGGATAAGTTTGATTACGCTGAGCCGATGGAGTGTCCCATGTGCAAGCAGATCTTTGCCAAGACCTCGATCAAGGCGCACATGGCGACGCACTCGACAGATCCGCAATACGATTGCGCCATTTGCAACAAGAGCTTCTCCACCAAATGGAATCTCAAGATACATTCATGGGTGCATGCGAATCGCACAGCCAAGCCGTTCAAGTGTGAGTACTGCCCCAAGGCATTCGTGCGCGAGCTGGACTTCAAGAATCACATGAACGCGCACAAGCAGATCAAGCCGTACACGTGCGAGTACTGCGGCTGCAAGTTCATACGCAAGTACAACTATATGCGGCATCGGCGGGAGCATCATGGCAACAAGAAGTTCACCTGTGACCAGTGCGACAAGTCTTTCCATCGGCATTATTATCTGATTGAGCATCGACGCATCCACACGGGCGAGCGTCCATTCCACTGCACCATCTGTGGCAAGAGCTCGACGACGAAGACCAATCACAATAAGCATCTGAAGATACATCATTCACGGGATCCATTCACCGTGGaagtttaa
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVNNNGMGSALAAALLSGDGATSSTSLSATNAVDVKPVVPASSPPPPPPPAPAPPATAAAVAGATKSTTAKAALPSSSNSISNSSCGNNNNNKLSNPPIKAVKNAPPSTEAPANTSNTPTTSSVTAIYSDYRYEQQSQQTPAAPTAVHGFARGATTLVIPQAPHQQQQPQQQQQHQYLASQQQAAHFAHLQQQQQQQQPALKYTYAAALPPPPPLQLFAQQTTATQSHQKPPPAYGAAISQIRSQHNQNKQQQQQQQQQQQQQQQQQQQQQPQQQHITLQHNINLAPPSGKHSKLHTDIFLNPPPPPPPQPQPQLTIPSALSTASLRLQYPPQHQQSLAAASSSSSSNSGGGSSSSNYAVANCAAASSSSALMSSNTVGRASSSRQTTNSPFGALLNAAAQAACASPASSSASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDDEEEDDEEDDKGWTNSDAEDHLKMEDHVEDGDDEHEDSRSRASHKATTKKSRKAKANGRKHKRANKHQSDDEDDFMSIGSSCAESEHQLEQQQQQAQQSHVPQAASPAPLSTAPSTSSGAAAAASCSTNSNKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRISATRPFAAVAPIPLVKVEKEEPMDEYDTVRDEMQACMEQKHSLEHATASSSSSNSGHGTTSVIRMASTSSAATNANVANDDLTQPPPMKVEVEPTVLLPQRFSAPAQHRGPKKLVIKPKATGTASASATTKKTDNSAASSSSGNGASSSNSVEPLSISSKASAEPLQIKSEAGEHLSGSGSILEKHLTNSYAAQQARKHSAVNDDDARVLLEFANSKQQPPAGNSNQTTFVVNAASFASAGSVFASGSSSVPKPAKPGDEYILPDNNLEVDEIVISSSSSYASDSQHEQLQQQQAHQSQQQPAAQQAVQQSQQPSSFTDFNFLYHQHGAPTVAAAAATTTAAAATTASTFAPFGMQQQQQQQQQQVLQHPQHGSSEATNAATLASSSSNSSVLEQDCSMNATFRVGKQQSTMASWYQPQSQSQSQPQPQPQPSTSHSSNVVEQSSNFIAALAAVECCSVAAVDSDASEAKYLDLDACKREQLSNSSSHLPSASASTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDLSQRYFRNQFADGYNQQLADWRQDYYPAQDLSGQQQPEREQKRFDFNAVAAEYAHTAGQLDASPGSTRNNHLLDAQPTTSSSSSALLAGPPIASTSRAAAEAEAVAAALAQRKPPRRKIYKCPHCVAIFEKLKERNAHMIGEHNYVRQNRRLICLSLVNSTLAGPQEQQAQGQQQQQQHQLLQSAGHSNADIMHEDSKDGIVKIKQEHCHDKQDASEQLLGHSELPDVKDSGLLNGSDENGRDADMKPPAGVTVLDEKPTIPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYICDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKILVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00516419;
- 90% Identity
- iTF_00544682;
- 80% Identity
- -