Dmul000109.1
Basic Information
- Insect
- Drosophila mulleri
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_035047565.1
- Location
- JAWNPK010000006.1:137992-148869[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-78 2.7e-74 250.3 15.7 93 299 67 263 61 264 0.99 2 2 0.059 1.1e+03 -1.3 0.7 261 288 283 312 265 314 0.42
Sequence Information
- Coding Sequence
- atgggcaAGAGCGATAGCAACGCCGAGCTACATCCGGGGCATTTGCGCGATCTACAGGctgagcgcaatcagagtcagctgcgctttCAGGACTATCTGGTACCACTGGAGTACTTGAAGTGGAATAGCTCAGCTAAAGGGCGGTGGACGCACATGCTCATCCCGGAGCTTGAACCATGGGTTAACCGCATACACGGCGAGGAAGTAGAAGAACGTTTTCGAAAAGCTATGATAACGAATGCCCAACTTGACAACGATCGTTCATCACAGACCTATGAGGTTAAACTACTTAAAGATAAAAGTGAAGCAATGCAAGAATCTCTTGCGCAATTGCAACgtgaatttaaaaataaacttcgCGATTGCAGTGTCCTTAAACGCAGCTTAGATCGCACAACTCTCGAATTAAACCTAGTGCAAGGACAGCTAAGTGAGCGTGATGCCCTAATAGAAGAACATggtcttgttattgttgctattgaaaATAGTGATGGCAGCGATGCGAAGCGTGCTCTAGTCACTGTTGAAAACGCCAATGTATTGGCAACTGTGCAGGGCTCTATTGacGTACGAATTAAAAAGATTACTGATGAAAAGCAGCGCCTTCTTAATGAAATGCAGAAGCTCCGTGAGCAGCTGGACGCTCTTAAAAATGAAGGAAGACCAGTTCGGGGCAGTCTACTAAGTGACTCTTTGGGGTATGATGATGACTATGATGCGCAGAgagaatcaaataaaatcatatccgactataaatataaactacaGAAAGCTGAACAAGAAATTGCCAGTCTGCAGGCAAACCTAGCGCGCTCAGAGTCTCAAGTTATACGTTACAAAAGTACAGCTGAAGCTGCCGAAAAATCTGAGGCTGAACTTAAAGTAGAAAGACGTAAACTGCAACGTGAGGTACGAAAAAATACGTCAATTATTAAGTATGAATGA
- Protein Sequence
- MGKSDSNAELHPGHLRDLQAERNQSQLRFQDYLVPLEYLKWNSSAKGRWTHMLIPELEPWVNRIHGEEVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKSEAMQESLAQLQREFKNKLRDCSVLKRSLDRTTLELNLVQGQLSERDALIEEHGLVIVAIENSDGSDAKRALVTVENANVLATVQGSIDVRIKKITDEKQRLLNEMQKLREQLDALKNEGRPVRGSLLSDSLGYDDDYDAQRESNKIISDYKYKLQKAEQEIASLQANLARSESQVIRYKSTAEAAEKSEAELKVERRKLQREVRKNTSIIKYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -