Dmon010585.1
Basic Information
- Insect
- Drosophila montana
- Gene Symbol
- -
- Assembly
- GCA_003086615.1
- Location
- LUVX01061387.1:20347-26504[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.036 3.1 8.5 0.3 1 23 1266 1289 1266 1289 0.94 2 13 6.3 5.4e+02 1.4 0.2 1 23 1454 1476 1454 1476 0.91 3 13 0.00014 0.012 16.1 2.7 2 23 1479 1500 1479 1500 0.97 4 13 5.4e-05 0.0046 17.4 0.2 3 23 1508 1528 1506 1528 0.98 5 13 4.5e-07 3.9e-05 23.9 4.1 2 23 1535 1556 1534 1556 0.97 6 13 4.3 3.7e+02 2.0 0.4 5 23 1569 1587 1567 1587 0.96 7 13 1.1 91 3.9 5.4 3 23 1594 1615 1592 1615 0.93 8 13 0.11 9.7 6.9 0.2 2 23 1626 1646 1625 1646 0.96 9 13 4.3e-05 0.0037 17.7 0.4 1 19 1652 1670 1652 1674 0.95 10 13 1.2e-05 0.0011 19.4 0.5 1 23 1682 1704 1682 1704 0.98 11 13 8.1e-05 0.0069 16.8 7.6 1 23 1710 1732 1710 1733 0.96 12 13 0.00016 0.013 15.9 5.9 1 23 1738 1760 1738 1760 0.98 13 13 0.022 1.9 9.1 8.2 1 23 1766 1788 1766 1789 0.95
Sequence Information
- Coding Sequence
- ATGGTGGACTGTGTGCAGTGCCCCGTGTGCACATTGTATCTGCATGCGGGCATGAATCTCTCCGATCATTTGGAGACACATCCCAAGGAGCAGGTCATCAAGGCTCTGGTGCAAATGACCATAGCTGGCAACAATGGCATGGGCAGCGCgctggctgcagctgtgctCTCCGGCAGCGCCGCAGCAATAGATGGTGGCGCTGCATCCagctcatcctcatcatcatcatcatcatcatcatcaacgacGGCGGCTGATGTGAAACCAGTTGTGCTAGACGCAGCACCTGcaccaacaacatcaacagcatcaacagcatccAAATCAACAGCACCCAAAGCTGCATTGcctagcagcagcaacaacaatagcaacaaattgaGCAATCCACCGATTAAGGCAGTTAAAAGCGCGCCACCCACGACTGAGGCGCCAGCCAACACATCCAATACACCCACCACTAGCAGCATGAGCGCCATCTATTCCGACTATCGCtatgagcagcagccgcagcaccaGCAGGCGACGCTGCACGGCTTTTCACGTGGTACGACCACGCTGTTAATACCGCAAgcgccacaacagcagcatcagtaTCTGGCCAGCCAGCAGCACTTTGcccaccatcagcagcagcagcaacagacggCCATGAAGTACACCTATGCAGCAGCGCttccaccgccgccgccgccactgcAGCTCTTTGCACAGCAGGCGACGTCAACGCAGTCGCATCAGAAGCCACCACCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAgcacaaccaaaacaaacagcaacaaacacaacaacaaNNNNNNNNNNNNNNNNNNNNNNNNNNNcagcaacaacaacaacaacacatgaGCGTACAACACACCGTTAACCTTGCACCACCGAGTGGCAAACACGGCAAAGTCCATACGGATATCTTCTTGAATCCACCGCCTCCACCAGCGCCACAGCTCACGATTCCgtcaacgtcgtcgtcgtcattgtCAAGACTGCAACATGcacaacagcaccaacaatCTCTTGCAGCCGGCAGCTATGCAGCTGCCAACTGCGCTAGCTCCTCTGCGACTATGATGTCATCCAGCTCCGTCGGACGAGCCAGCAGCTGTCGCCAAACAAGCAACTCGCCTTTTGGTGCGCTCTTAAATGCCGCAGCGCAGGCCGCCTGCGCCTCGCCCGTTACCTCCAGTGCGTCTGTGCTGCGCTATGCCGAGTCACCAGTGGCCCACTATCTAGAGCGAGAGAATGGCGATTTTATAGTCCAGGAGACGCCCAAGCACATTGTGGAGTGCGTCGAGAAGGATGACGGCGAGTTCTCTGTGATTGAGCGCATCTATCAGTCGCCACCCAGCGTGCTGCACATacacgacgatgacgacgacgaagagGACGATGAAGATGACAAGGGCTGGAACAGCGATGATGAGGATCACATGAAGGTGGAAGATCATGTAGAGGATGGCGACGACGAGCACGAGGATAGCCGAAGCAGAGTTGCACCCAAAACCACAACGAAAAAGTCACGCAAGACAAAAGCAAATGGCAGAAAGCACAAACGCGCCAGCAAGCATCAGCCGGAAGATGAGGACGACTTTATGAGTcttggcagcagctgtgccGAAAGTGAACACcaggcagagcagcagcaggcgcaggtGCAGCTGTCGCTTGCGTCCTCTTCGCCAGTTCAACTTAGCACGGCGCCTTCGACGAGcagtggagcagctgctggtgctgctgccaccgcttccccctcccccacctcTTCTGGCAGTGCCAACTCGACGCCCAGCGGCTCCACAAAGTCCAAAAAGAATCGCGTGACGGTACTCAGCGATGTGCCGCTCAACATGAACGAGTATTTGGATCTGGTGGGCAACATTGTGGCTTCGGGTCGCATTGGTGCAGCTCGTCCGTTTGCTGCAGTGGCGCCCATACCGTTGGTCAAGGTGGAAAAGGAGGAGCCAATGGACGACTACGACACCGTACACGCTGAAATGGAGCAGGCAGTGGAGCAAAAGCCCAGCGTTGAACAtgccagtggcagcagcagcaacagcagcagcagtggccaCGGCACCACAAGCGTCATACGCATGGCAGCCAGCAcaagcaccagcagcggcacaaACGTTGCTAACGAGGATCTCACACAGCCGCCGCCAATGAAAGTGGAAGTGGAGCCAACGATGCTACTGCCGCAACGCTTCTCAGCTCCGGCGCAGCAGCGTGGACCCAAGAAATTAGTCATCAAGCCAAAGGCCACAGCGACGGCAACGACAAAAAAGACTGAGAACAACGCTGCCGAAACAGCCAGCATATCAAAGGCGTCCACAGAGCTGGTGCAGGTGAAGAGCGAGAATGTGGAGGCAGCCGTAACAACAAGCGGCAGCATACTAGAAAAGCATCTGACTACCAGCTATGcggcacagcagcaggcgcgCAAACACTCTGCAGTCAACGATGATGATGCGCGCGTGCTGCTCGAGTTTGCCAACTCGAAGCAACTGCCGCTAGCGGGGAACAGCAACCAGACTACGTTTGTGGTAAATGCGGCCAGCTTTGCCTCGGCGGGCTCCGTATTTGCCAGCGGCAGCGCGAAGAAGTCAAGCAAGCCGGGCGACGAGTACATTCTGCCTGATGATAACAATCTGGATGTGGATGAGATTGTGATATCCTCCTCGTCATCCTATGCCTCTAattcgcagcagcaacaattacacCAGTTGCAGcggcaccgTCCGCCTTTacagatttcaattttctgtatcaaaatgcaacagcaacaacagcggcagcagcaNNCAGCCTCCCACTTTGCAGAATTTGGCATACAtcaagagcaagagcagcaggagcagcaggagcagcaggaccAGCTATTGCAGCATCATCCACAGCATGGCTCTAGCGAGGCCACCAATGCCGCCACGCTGGCCTCCTCTTCTAGCAATTCATCGGTAATGGATCAGGATTGCTCCATGAATGCCACGTTTCGCTTGGGCAAGCAACAATCCACATTGGCTGGCTGGtatcagccgcagcagcagcagccacaggcAAGCACCTCGCACAGCTCCCATGTGGAACAGTCGAGCCATTTTATTGCCGCACTCGCAGCCGTTGACTGCTGCAACAGTGTGGCGGGCGTTGATAGCGATGTCAAGTATTTAGATCTGGATGCCTGCAAGCGGGAACAgttaagcaacagcagcagccatttgCCCTCTGTATCCGCATCGACAACATCCTCATCATTTGCGGCCGCCGCCACGGAGAGCAGTCTGGTTAGTGGCTTGGGCCTAAACATACGCACCGATGAGAAAATGCCCGCCAAGGGTGAAATCTCCGAGCAGGAAAGCAACTGCGATATTGAGAACTCCTGGAGTCAATCGATGTATGGTGACATATCACAGCGCTATTTTAGAAATCAGTTTACGGATGGGTATCATCAGCAGCTGGCCGATTGGCGTCACGATTCCTATCCGCCGCAGGACCTCagtggccaacagcagcagcagcagccccagcGTGAGCCAAAGCGCTTTGATTTCAACGCTGTCGCCTCGGAGTACGCGCAGTCGGGCGAGCTGGACGCCTCCCCGAACTCAAATAGACACAATCATTTGTTAGATGCACAGCCCACTACTTCCTCGTCGTCATCGGCTTTGCTGGCTGGTCCACCAATAGCCTCGACGTCACGTGCTGCTGCCGAAGCGGAGGCTGTCGCTGCAGCATTGGCGCAGCGAAAGCCACCGCGTCGCAAGATCTACAAGTGTCCGCACTGTGTGGTCATCTTTGAGAAGCTGAAGGAGCGCAATGCGCACATGATTGGCGAACACAACTATGTGCGCCAGAATCGACGACTCATCTGCACGCAGCCGCTGGTAAATGCCACAATGCTGGCACAGCCGCCGGctcaggagcagcaacagcagcgccagcagcaagtCCTGCTGCAGTCTGTGGGGCAAAGCAATGGCGATGTTGTACATGAGGATTCCAAGGATGGTATTGTAAAAATCAAGCAAGAACACTGCCAGGATAAGCAGGATTCATCGGAGCAGCTACTTGGCCAAATGGATATACCCGATGTCAAGGATGCTGGCCTGCTAGATGCCAGCGCTGATAATGGTCGCGATGCGGACATGAAGCCACCAGCCAATGTCTCAGAGCTGGACGAGAAGCCAGCCATAGCACCGTTAGCCATGACGACACCAGCTGCCAAGCTGGCTGCTCTATATCGCATGCTCATTGCCTACAATGAGTCCAAGCTGGGTCAGGAACGCAACAATCTCAGCGAGCTGGAGCAAAAGGCCATGGAGAAATCCATATTCCTCTGTTATGTGTGCCGCACCGATTTCCCCTCCGTAAAGCTGTACGATGCACATTTGACAGAGCATCCCGCTGAGTGTTTCACCTGTGGCAAGAAATTCTATCGTTGGAAGAACTTTTCGCTGCATTTGAAAAGGCATCTAGGCTGGAAGGAGTTCGGCTGTTATGTCTGCGACAAGAAGTTTGTGGTGCGCAGCGCGCTAGTGGAGCATATGCGCATGCATACGGGCCAGACGCCGCTCAAGTGCAAGATATGCGGCAAAAAGTTCAAACGTTATTCGAACTTGACACAGCATCGCAAGCGTCACACCAAAATGATGGTGCGCAAGAAGGAGTACGTGTGCCATTGTGGCGAGGTGCTGCCCTCCAAGGCGCGCTTCCTGTGGCACAAGGAGACCCACGACTTGAAGCCCAAGTGCTGTCCGTATTGCTGCGATCGTTTCGTGCATGCCAATTCGCTGCGGAGGCACATTCGACTGGCCCATTCGGATAAGTTTGACTATGCCGAGCCGATGGAGTGTCCCATGTGCAAGCAGATCTTTGCCAAGACCTCCATCAAAGCTCACATGGCTACACATTCGACAGATCCGCAATACGATTGCGCCATATGCAACAAGAGCTTCTCTACCAAATGGAATCTGAAGATACATTCGTGGGTGCATGCGAATCGCACGGCCAAACCGTTCAAGTGCGAATACTGCCCCAAGGCGTTCGTTCGCGAGCTGGACTTCAAGAACCATATGAATGCCCATAAACAGATCAAGCCATACACCTGCGAGTATTGCGGCTGCAAGTTTATAcgtaaatacaattatatgcGGCATCGACGGGAGCATCATGGCAACAAGAAGTTCACCTGCGACCAGTGCGATAAGTCTTTTCATCGTCATTATTATCTGATCGAGCATCGGCGCATCCACACCGGCGAGCGTCCCTTCCACTGCACCATCTGCGGCAAGAGTTCGACGACAAAGACCAACCACAATAAGCATCTGAAGATACATCATTCGCGGGATCCTTTTACCGTCGAggtttaa
- Protein Sequence
- MVDCVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIAGNNGMGSALAAAVLSGSAAAIDGGAASSSSSSSSSSSSSTTAADVKPVVLDAAPAPTTSTASTASKSTAPKAALPSSSNNNSNKLSNPPIKAVKSAPPTTEAPANTSNTPTTSSMSAIYSDYRYEQQPQHQQATLHGFSRGTTTLLIPQAPQQQHQYLASQQHFAHHQQQQQQTAMKYTYAAALPPPPPPLQLFAQQATSTQSHQKPPPAYGAAISQIRSQHNQNKQQQTQQQXXXXXXXXXQQQQQQHMSVQHTVNLAPPSGKHGKVHTDIFLNPPPPPAPQLTIPSTSSSSLSRLQHAQQHQQSLAAGSYAAANCASSSATMMSSSSVGRASSCRQTSNSPFGALLNAAAQAACASPVTSSASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDDDEEDDEDDKGWNSDDEDHMKVEDHVEDGDDEHEDSRSRVAPKTTTKKSRKTKANGRKHKRASKHQPEDEDDFMSLGSSCAESEHQAEQQQAQVQLSLASSSPVQLSTAPSTSSGAAAGAAATASPSPTSSGSANSTPSGSTKSKKNRVTVLSDVPLNMNEYLDLVGNIVASGRIGAARPFAAVAPIPLVKVEKEEPMDDYDTVHAEMEQAVEQKPSVEHASGSSSNSSSSGHGTTSVIRMAASTSTSSGTNVANEDLTQPPPMKVEVEPTMLLPQRFSAPAQQRGPKKLVIKPKATATATTKKTENNAAETASISKASTELVQVKSENVEAAVTTSGSILEKHLTTSYAAQQQARKHSAVNDDDARVLLEFANSKQLPLAGNSNQTTFVVNAASFASAGSVFASGSAKKSSKPGDEYILPDDNNLDVDEIVISSSSSYASNSQQQQLHQLQRHRPPLQISIFCIKMQQQQQRQQXXASHFAEFGIHQEQEQQEQQEQQDQLLQHHPQHGSSEATNAATLASSSSNSSVMDQDCSMNATFRLGKQQSTLAGWYQPQQQQPQASTSHSSHVEQSSHFIAALAAVDCCNSVAGVDSDVKYLDLDACKREQLSNSSSHLPSVSASTTSSSFAAAATESSLVSGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFTDGYHQQLADWRHDSYPPQDLSGQQQQQQPQREPKRFDFNAVASEYAQSGELDASPNSNRHNHLLDAQPTTSSSSSALLAGPPIASTSRAAAEAEAVAAALAQRKPPRRKIYKCPHCVVIFEKLKERNAHMIGEHNYVRQNRRLICTQPLVNATMLAQPPAQEQQQQRQQQVLLQSVGQSNGDVVHEDSKDGIVKIKQEHCQDKQDSSEQLLGQMDIPDVKDAGLLDASADNGRDADMKPPANVSELDEKPAIAPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00563356;
- 90% Identity
- iTF_00563356;
- 80% Identity
- -