Dmon011665.1
Basic Information
- Insect
- Drosophila montana
- Gene Symbol
- -
- Assembly
- GCA_003086615.1
- Location
- LUVX01010078.1:85200-86874[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.2e-17 2.2e-13 49.7 0.0 2 45 370 413 369 413 0.95 2 3 0.038 1e+02 2.8 0.0 28 37 443 452 442 457 0.90 3 3 2.6e-18 6.9e-15 54.5 0.0 7 42 473 508 472 510 0.96
Sequence Information
- Coding Sequence
- ATGAATCACCTAAAATGGATGGGGCACTCATCCACAATAATGGATATACAGCGCGTTCTGCTGCATCAACAAAGCAACAATCAACAATGCGAGGTATTGCTCGTGGCCAAAGACGGCATCAGTGTGCGCGCCCATCTTTTCGTACTGAGTACGTGCAGCGATCTGATGCGCAACCTGCTTGTCGATTTACCCGCCGGCCAGGAGGCAACTGTCATTCTGCCAGACATTCGTGGTGAGCTGCTCGAGAGCATGTTGTCGTTTATTTACATGGGAGAGACCAGTTTACCCTCCGCCCTGCTCACCGAGTTTCTCGAGGCCATTAATCTATTGGGCATAAAATCTGCCATTAGTTTCGAAACCAATCCCACTGCCATGACCACCTCGAATGTTATAAGCGGCGCTATGGCGGTCGAGGCTGCCAAGTCAATAAGCGGGTTACACATTGCGAATACAGCTCTtatggaggaggaggaagaggaagatCCTAGTGCGGTGGTCGGCAAACTGGAGGTAGGCAATGCTGTACTCGCAAATCCCCAACAGCAGCACGAACAGGAAGGCCGAACCTTGGAATTTCTTGATGTCTACGGTGAACAGCCCAAAATAACGTATTCGATTGAACACATGGGTGGCACAAGCAGCGggaatcaatatatattaacagaGAACACGGGAACATTTACCATAACACAATCAGCATCGTCTGTGGCTAAATTAGGTGTGGCAGGTAGTTCAGCTGTGGTGGACTCTGTGGCGACTGGTGAGCTGGGCGATGATGATGCAGAGGCTGAAAATACGGACGAGCAGGACGAATCCGAGTCACAGTTAATCGAGGAGGAGTATGTTGGATCGGGTGATCCATTAATAGAGATGAGCGCAGATGCCGATGTTGATTTGCACGAAGATGGAATGCAGGAAGGAGAACCTGGAGACGAGGAGGAAGATGATGAATTGCTGGATGTTAAACCCCGAAAAGTTCACCTAgatatgaaaatgttaaaaacaaagGCACGCCAACGGCCAATGTCGGCGAAGGTTACAAAAAAGACAATGAcaaaacaatatcaacaacacGCCGCacttaaaaaagaaagcaaggaTGACATCAATGATGCCCTCgatctggcagctgctgccgtaCTCCACGAAGGGCTCAGCCTGCAAAAGGCTGCCGATCGTTACGACATATCGAAAACCGTGCTGTGGCGACGAGTACGCTCCAATCCGGCCTACATGAGAATAAAGCGCGAGAAGCCTTCGCTTTCGGAAGCATACGAACGCTTGAAAAATGGCGACTCGTTAAAAAGCATAAGCCAGGATCTGCATATACCCATGTCGACGCTGCACCGACACAAGGTGAGGCTTGCGGCACAAGGACGCCTGCCCGATTTTGTTGCTTGCCGGCGGCGAGATNNCAAGGCGGTGCATGCCTGCATAAACGGAGGCATGTCGCAAAATCATGCAGCAAATCTCTTCGAAATACCCAAAAGCACGCTCTGGCGGCACTTGCAGCGCCGCGTTACCGAGGCGGAGCGTAAAGTCAAGGAGGAGCAGGAAGAAGACGAAGATGAGGAtgttcttaattaa
- Protein Sequence
- MNHLKWMGHSSTIMDIQRVLLHQQSNNQQCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPAGQEATVILPDIRGELLESMLSFIYMGETSLPSALLTEFLEAINLLGIKSAISFETNPTAMTTSNVISGAMAVEAAKSISGLHIANTALMEEEEEEDPSAVVGKLEVGNAVLANPQQQHEQEGRTLEFLDVYGEQPKITYSIEHMGGTSSGNQYILTENTGTFTITQSASSVAKLGVAGSSAVVDSVATGELGDDDAEAENTDEQDESESQLIEEEYVGSGDPLIEMSADADVDLHEDGMQEGEPGDEEEDDELLDVKPRKVHLDMKMLKTKARQRPMSAKVTKKTMTKQYQQHAALKKESKDDINDALDLAAAAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLHIPMSTLHRHKVRLAAQGRLPDFVACRRRDXKAVHACINGGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEEDEDEDVLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00549654;
- 90% Identity
- iTF_00512829;
- 80% Identity
- iTF_00550991;