Basic Information

Insect: Drosophila mojavensis
Gene Symbol: -
Assembly: GCA_018153725.1
Location: JAECYD010000036.1:17092803-17095432[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2 1.6e+02 3.1 0.6 3 21 470 488 468 492 0.91

2 10 0.34 26 5.5 0.2 2 23 514 536 513 536 0.91

3 10 0.029 2.3 8.9 0.8 1 23 553 576 553 576 0.95

4 10 0.52 41 4.9 0.1 1 21 581 601 581 605 0.90

5 10 0.0013 0.098 13.2 0.1 2 23 663 685 662 685 0.93

6 10 0.34 27 5.5 1.5 1 21 690 710 690 711 0.92

7 10 0.91 70 4.2 0.2 2 23 730 751 729 751 0.91

8 10 7.1e-05 0.0055 17.1 3.0 2 23 764 784 763 784 0.97

9 10 2.9e-05 0.0023 18.3 1.7 1 23 790 813 790 813 0.95

10 10 2.5 2e+02 2.8 0.2 1 10 842 851 842 854 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2	1.6e+02	3.1	0.6	3	21	470	488	468	492	0.91
2	10	0.34	26	5.5	0.2	2	23	514	536	513	536	0.91
3	10	0.029	2.3	8.9	0.8	1	23	553	576	553	576	0.95
4	10	0.52	41	4.9	0.1	1	21	581	601	581	605	0.90
5	10	0.0013	0.098	13.2	0.1	2	23	663	685	662	685	0.93
6	10	0.34	27	5.5	1.5	1	21	690	710	690	711	0.92
7	10	0.91	70	4.2	0.2	2	23	730	751	729	751	0.91
8	10	7.1e-05	0.0055	17.1	3.0	2	23	764	784	763	784	0.97
9	10	2.9e-05	0.0023	18.3	1.7	1	23	790	813	790	813	0.95
10	10	2.5	2e+02	2.8	0.2	1	10	842	851	842	854	0.84

Sequence Information

Coding Sequence: ATGAACTCGCAATCGGATGATGTGGATGATGTGCACCTGTGCATTAAGTGCCATGCGACGATTGTGGGTCTGCGCAAATACATTTATCATCGTAAGCAGCATTGTCTGCGCATGGTGGGAGGCAGTCGAAAGGAGAAGCAACTAGAGGCCACGGCAACGACATCTGCGACTTCTGCGCACGTGACGCGCACAGTTATAACGCGCTCCAGCTTGGAGCATAGCTATGATGGGTTCAATTTTGGCGAGGCGGAAGCACCGAGCAGCTACTTGCGCAAGACGACGGACAGCCATGGGGGCAAGACGTCGAAAGCCCTAACTGAGGCGTACGATCCGACGTACGAGCTGGGCGCCGATGTCTTCTTTTCCTCGCTGCAGCTGCAGAGCGTCTCCACGGGCGGCAAGACGGGCGCACGATCCGAACGTGGCACTAAGGAGGAACAGAGCTGGCATTCAGCGGACCGGTGCTCCGATCCTTTGTTGAAGGCGGTGCGGGAGCATGAAGAGCCGGTGTTCAAGACGCTTAACTTTGCCCATTCGCCGGAGGCGAGCGAGGAGGAAGACGAGGAGGAGGAGCCCGATGAGTCTGATGGCGATGATGATGAGGCAGAAAATGACCAGGACCCAGAGTTCGATCCCGAGCTCCATCCAGATGAAGATTACGATGGGCGACGCCACTCGCCGCCGACTGTGCCCGCCACGCACACTGGCGGCAAGTGGAGGCCGGATCAGCGGCCACAGCTGCATCACACGCACCTGGAACGCATCTCGCCCAGCTGGGATGAGCCGGCCGAGGACGCCCACGATCATCCGCCCGCCGAGCACACACACGGCAAATGGGTGCCCGGCAGCAAGCAGCTGGAGTACCGGGAAAACATTGATCTGACCAAGCTGGAGCAGCCGAGCGCCAGCTATTGGTGCAACATCTGCTGTCGCCGGCTCAAGACGCGACTCATCTACGATCAGCATCTGCGCAGCAACTACCATAAGCGGCGCGCGGACACCGAGTGCCAGCTGGAGCAGGCCAATCTCCAGTCCGCCCATCTGAAGGTCAACAAGAACTTTGCCCATCCGCCCGCGCCATCGGCGAAGGAGCAAATGCATCAGCGGCGTCGTCGTCGCGCCCGTCTGCTGCGCTGCGAGCTCTGCCGGCACAGCATGGCGCGCCATCTGATCGGCAAGCATCTGATCTCGCACTATCACTATCGGCGCATGCAGCTCAAATCGCAGGTGGGCAGCCAGAGCGCCTCGCTGCACGCCATTCTGGAGCACATGGGCAGCATTGTGCGGCAGGCGCCGTTCCAGTGTCTGCCCTGTCGCTTCTATGCCAATACGGAGCAGGCCTTTCAGGCCCACTGGCGTTCCTCCGCGCACATCGAGCTGACCGGGCGACTGGGGGGCACCTTCTGGTGCAGCTACTGCCAGTTCGAGTGCGGCAGCAACGAGGAGATGTGGCAGCATCTCCTGGGCAATGGGCACATGGAGGTGCTGCATGCGATTAATCGATCGGTGCCCGTTTGCATTGGCCAGCGTCGGCACCTCAACTGCTCCGTGTGCCAGGCCGGCTTCCTCTACAACGCCCAGCTGCGACGCCATTTCGCCTCGGAGCACGGGGGCGTGGCACCCACAGGCAGCGCCTCGGATGACTATCAGTGCCGCTTCCGCTGTGACATTTGCGGAGCGCCGCAAAAATCGCGCGTGGCTTTGCAGCGCCACGAGAAGCACAAGCATCGCCTCAGTAAATATTATTGCGCCGTGTGTGAGCTGGAGTTCGAGACGCCACTGGCTGCGCGTCGGCATCGCAGTCTACTGAGCCATAAGCAGAATGCGATGCTTCGCCAGGATGGTGGCCCATGCAGCAGCTCTGTGCAGCCAGAGGGGGAGACCGAAATAGAGCACATGCTGCGTGAGGTGCTGGACGATCCGCTATCCGAGCCCGAGCAGCCGACAACGAGCTCAGGCACCGGCCGGAGGCGGATCTGGATTAGCCAGTGCGCCAATTGCCAGCAGAGCTTTGAGTCTCCCCAGGCGCTGATTCGGCATCGCAGCGAGGCCCATCCCATGGAGAACCACTGCTGCCTCAGCTGCGGCAGCAGCTTCCAGACGGCCCAGGCCCTGGGGCGGCACACGCGAAGCTGCCAGCCCATTACCTCGATCTCCTCCACCATGGACGCGGTCGCCAATGAGTGGCCCTGCGATCAGTGCGGCTTCAGTGCCCAATACGAATCGGATCTGCTCTATCATCGCTTCTTTCACGTACGCGGCCCAACGATTGGCAAGGACGAGCTGCTGCAGTGTCCGCGCTGCCCCAAGCGCTTCCGCAAGCACTCGCTGCGCGCCCACCTGCGCAACCACACGAACGAGCGCATCTTCGAGTGTGACCAGTGCAAGGCCAAGTTCGCCAGGCGACACAATCTCAAGAGCCACATGGCCAACATTCATGGCCAACGGGAAAATCCAGAAAATGCCCCCAAGACAACGAAAACAACGACGACGACAACGACAACGATGCGAGCCAAGCCGAAATTTGAATGTGGCACGTGTGGCAAAATGTTGGCTAAAAAGTAA
Protein Sequence: MNSQSDDVDDVHLCIKCHATIVGLRKYIYHRKQHCLRMVGGSRKEKQLEATATTSATSAHVTRTVITRSSLEHSYDGFNFGEAEAPSSYLRKTTDSHGGKTSKALTEAYDPTYELGADVFFSSLQLQSVSTGGKTGARSERGTKEEQSWHSADRCSDPLLKAVREHEEPVFKTLNFAHSPEASEEEDEEEEPDESDGDDDEAENDQDPEFDPELHPDEDYDGRRHSPPTVPATHTGGKWRPDQRPQLHHTHLERISPSWDEPAEDAHDHPPAEHTHGKWVPGSKQLEYRENIDLTKLEQPSASYWCNICCRRLKTRLIYDQHLRSNYHKRRADTECQLEQANLQSAHLKVNKNFAHPPAPSAKEQMHQRRRRRARLLRCELCRHSMARHLIGKHLISHYHYRRMQLKSQVGSQSASLHAILEHMGSIVRQAPFQCLPCRFYANTEQAFQAHWRSSAHIELTGRLGGTFWCSYCQFECGSNEEMWQHLLGNGHMEVLHAINRSVPVCIGQRRHLNCSVCQAGFLYNAQLRRHFASEHGGVAPTGSASDDYQCRFRCDICGAPQKSRVALQRHEKHKHRLSKYYCAVCELEFETPLAARRHRSLLSHKQNAMLRQDGGPCSSSVQPEGETEIEHMLREVLDDPLSEPEQPTTSSGTGRRRIWISQCANCQQSFESPQALIRHRSEAHPMENHCCLSCGSSFQTAQALGRHTRSCQPITSISSTMDAVANEWPCDQCGFSAQYESDLLYHRFFHVRGPTIGKDELLQCPRCPKRFRKHSLRAHLRNHTNERIFECDQCKAKFARRHNLKSHMANIHGQRENPENAPKTTKTTTTTTTTMRAKPKFECGTCGKMLAKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00551940; iTF_00516588;
90% Identity: iTF_00551940;
80% Identity: -