Basic Information

Insect: Drosophila mojavensis
Gene Symbol: -
Assembly: GCA_018153725.1
Location: JAECYD010000073.1:8137106-8139613[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.029 2.3 8.9 4.0 1 23 269 291 269 291 0.97

2 11 1.2e-05 0.00095 19.5 0.5 1 23 297 319 297 319 0.99

3 11 0.00019 0.015 15.7 2.5 1 23 325 348 325 348 0.97

4 11 0.33 25 5.6 3.8 1 20 354 373 354 376 0.95

5 11 0.008 0.62 10.7 1.7 1 23 382 404 382 404 0.97

6 11 3.7e-05 0.0029 18.0 1.2 1 23 410 432 410 432 0.98

7 11 0.00012 0.0096 16.3 1.2 1 23 440 463 440 463 0.96

8 11 0.0023 0.18 12.4 2.3 1 23 469 491 469 491 0.98

9 11 0.00073 0.057 13.9 0.8 1 23 497 519 497 519 0.98

10 11 3.7e-05 0.0029 18.0 1.4 1 23 525 548 525 548 0.96

11 11 4.8e-05 0.0037 17.6 3.6 1 23 562 584 562 584 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.029	2.3	8.9	4.0	1	23	269	291	269	291	0.97
2	11	1.2e-05	0.00095	19.5	0.5	1	23	297	319	297	319	0.99
3	11	0.00019	0.015	15.7	2.5	1	23	325	348	325	348	0.97
4	11	0.33	25	5.6	3.8	1	20	354	373	354	376	0.95
5	11	0.008	0.62	10.7	1.7	1	23	382	404	382	404	0.97
6	11	3.7e-05	0.0029	18.0	1.2	1	23	410	432	410	432	0.98
7	11	0.00012	0.0096	16.3	1.2	1	23	440	463	440	463	0.96
8	11	0.0023	0.18	12.4	2.3	1	23	469	491	469	491	0.98
9	11	0.00073	0.057	13.9	0.8	1	23	497	519	497	519	0.98
10	11	3.7e-05	0.0029	18.0	1.4	1	23	525	548	525	548	0.96
11	11	4.8e-05	0.0037	17.6	3.6	1	23	562	584	562	584	0.97

Sequence Information

Coding Sequence: ATGTCAAAACGCACGCGCGGCTCCAATTCGGAGGATTTGCAAACATATCTGAGGAATTTTCACAAAGAAATAGAAGATGGCAATGTTGATGACAAAGAAGTGAAAGCAGATGATGCTGAATTGGAACAACAGGACGAGAACCAGGACGATGATGACGACGATAAATATTTTATAGACGACGAAGGCAACTGTTATATCAAAACCACACCAAGGAAACAAGAACAGCTCAAAAAGAAATTGAAACAACAAGCAGCATCGAAAACGTCAGACAAAGAAGAAATTTCAGTCCGTAGCACAACGCGTGCCGCCAGCAGCAAAACGTCCAAAGAAATTAGTCTGCGACCTGCGAAACCTGCGAAGCCTGTTGCATCTGCTCAGAGGAGTCCCAAAGCAATAAATATACGACCCGCACCGCCAAAAAGAACACCAGTTAAGATGACAACTTCTACACCAGTTAACACACTTAGAGGATATTTACGTTCTTCAACTAGATCTGCAAAGTCCGAGCCGGAGTCGCCGCCGAAGACTAAAATAGTAATAGAGAAGGTAATGGAATTCGAAGAACTCGTAGATGATCCGAGTGTCGGTGATGTCACCATAAACCAATCAGAGCTAACTGCCACTGCGAATGCTACTAGCCTAACCGAAGATCTGAACACGACCAAAGACGATTCGGACAAAGAGGTTTACGAGTTTGACGACAATGCTGCTAATATAACCGCCAGTTCGGATGTGGATTTCGTGCCCAGCGGAAATCAGTACAAACTAAAGCCGGCGGCTACTAATTCTGCTGGATCGCAGAAGTTCGCCTGCTCCCACTGTAACTATACGACCAATAAGAAATTCTTAATCTCACGACACGTTCGATCACATAACTCGGAAATGTCATTCAAGTGTTCTATTTGTGAGCGCGGCTTCAAGTCTAACATGGGTCTGGTCAATCACTTAAACACACACATGGGGAACAAGCCTCACAAGTGCAAGCTGTGTGAGAGCGCATTCACTACGAACGGAGAGCTTATAAGGCATACCCGCTACAAGCACACCAAGGAAAAGCCGCACAAATGCACGGAGTGCAGCTATGCCAGCGTTGAGCTGACAAAGCTGCGTCGTCACATGACGTGCCATACGGGAGAGCGTCCGTATCAGTGTCCGCACTGTACATATGCCTCACAGGATATGTTTAAGCTAAAGCGGCATCTGGTCATTCATACTGGCGAGAAGAAATACCAGTGCGATATCTGCAAGTCCCGCTTTACCCAATCAAACTCGCTCAAGGCACACAAACTTATTCATAGCGTGGTGGATAAACCAGTATTTCAGTGCACTCTATGTCCCACCACATGCGGACGCAAGGCTGATCTGCGTACTCATATGGCCAATATGCACACCTCGGATAAGCCACATACGTGCAAGCGCTGCGGCCAGGAGCTGCCCGATCGCTATCAGTATAAGCTACACATCAAGTCACACGAGGGCGAGAAATGCTATCGTTGCACCCTTTGCAGTTATGCTTCAGTGTCTCAAAGACATTTGGACGCGCATATGCTTATACACACCGACTCGAAGCCGTTTAAATGCAACTTGTGCTCCCAGGCGTTCCGTCAGCGCCAACTGCTACGTCGTCATGTCAACCTGATGCACAATGAGGACTACAAGCCACCAGAGCCACGTGAAAAGGTTCACTCTTGTCCCAGTTGTATGCGTGTCTTTACGCATAAGGGTAACCTGATGCGTCACATGGAAACACACGATGATTCGATGAATGCGCAGGAGCAGAAGCTCAAATTAAGACTTGGGCGTAACGTGCGCCTTCAGCCTGACGGAAGCATTGTGACTTTAGTCGATGGCTCCGACGTTCAGGACTTTGATAAAGGCGACACCATTTCCATTGACATCGAGGAACAGTTCGAGATCACTGAATTGGAGGAGATTGATGAGGAAGAGCCAGTGCCAAGCGAACCCATTGAGGAAACGTTTAATGCACCCACTTTGAGGACAAGAAGGGACAACAAAACTGTTGCTGTAAGAGATCAAGAGCAGAGCTCATCCAGTAAGCCGATCATTATCAATCGGCAATTAAAGGGTCCGCGTGCGCGCCGCGAACTAACCACCCAAGCCGGCACGTTCCGTATCAAGAAAGAGCCGGATGCAAACGAATTTACAGTAGAACTTGAAGGTGAAGATGAGCAGTTTATGGTCGTCCAGCTGGTTAACGATGATAGTGAGGTAGTGGTGAAGCGTGAACCCAAGATCAATGCCAATAATTGTTTTGGCTTCGAGGATGACGCCAATGTTGAATACGAAGAATATGTGGAGCCTGTAGCTGAAGTGGATGCAACATCGCAGCAGTTCCTTCAGCTAATGGACATGATTGAGCAGGATACATAG
Protein Sequence: MSKRTRGSNSEDLQTYLRNFHKEIEDGNVDDKEVKADDAELEQQDENQDDDDDDKYFIDDEGNCYIKTTPRKQEQLKKKLKQQAASKTSDKEEISVRSTTRAASSKTSKEISLRPAKPAKPVASAQRSPKAINIRPAPPKRTPVKMTTSTPVNTLRGYLRSSTRSAKSEPESPPKTKIVIEKVMEFEELVDDPSVGDVTINQSELTATANATSLTEDLNTTKDDSDKEVYEFDDNAANITASSDVDFVPSGNQYKLKPAATNSAGSQKFACSHCNYTTNKKFLISRHVRSHNSEMSFKCSICERGFKSNMGLVNHLNTHMGNKPHKCKLCESAFTTNGELIRHTRYKHTKEKPHKCTECSYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKLKRHLVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCTLCPTTCGRKADLRTHMANMHTSDKPHTCKRCGQELPDRYQYKLHIKSHEGEKCYRCTLCSYASVSQRHLDAHMLIHTDSKPFKCNLCSQAFRQRQLLRRHVNLMHNEDYKPPEPREKVHSCPSCMRVFTHKGNLMRHMETHDDSMNAQEQKLKLRLGRNVRLQPDGSIVTLVDGSDVQDFDKGDTISIDIEEQFEITELEEIDEEEPVPSEPIEETFNAPTLRTRRDNKTVAVRDQEQSSSSKPIIINRQLKGPRARRELTTQAGTFRIKKEPDANEFTVELEGEDEQFMVVQLVNDDSEVVVKREPKINANNCFGFEDDANVEYEEYVEPVAEVDATSQQFLQLMDMIEQDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00476798;
90% Identity: iTF_00540548;
80% Identity: -