Basic Information

Gene Symbol
MYB54
Assembly
GCA_037043585.1
Location
JBAMBE010001187.1:6387225-6389505[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4.3e-09 4.6e-06 26.6 0.1 1 38 232 270 232 277 0.96
2 4 0.00018 0.19 11.8 0.0 4 44 288 332 286 334 0.68
3 4 3.7e-09 4e-06 26.8 0.0 2 46 341 386 340 386 0.93
4 4 5.1e-08 5.5e-05 23.1 0.0 2 41 393 433 392 434 0.96

Sequence Information

Coding Sequence
ATGTGCGATGTTAATAGTCTGAAGCAGGAATaccaacaacagttgcaagaAATAACAACACTGCTGTTAACCACAGCTAAAAGCGATGCAGACCCCTTGCAAATGAATCAGGACCTGCAGCGTCGTCTCGAACAGATGCGTCAAAGCATTCTGGAGCTGCTACGGATAGTCCGAGCTCGTTATAAACGGAACGAGCAGATACTTGTAAGCCGCCAGAAGACGCGGACTTGCAATGCAGGAGCAGCGGGCACCGATGAAATCGTTGCAATAAGTGGAGCTGTGCTGCGCGGTGGAACGTTTCGATTTAAgggtaatttatattttcgtgATGTGGATGGCCGAAGTTGTCCCAACAATGAGGACTACGAGCGGCGCTGCAGCAATGAAATGTTCCCCACCGATTTTGATATGCGCTCCAAGCACGTCTGGACGGTTATGGACAAGAAAAACATCGTAATGGGTATTAAGCAACAGctGTTGGATCATGCCGCCTACACATCGACCGTGGACTGTACGGGTCGCAAGCGTAAGGCCATCGATCTGCATGAGCAATCGCTGGCTAATTTGCTGAAAGTGGCCGACAGCAGCTTCAGCATCGATTGGAATCAGATTAGCACACTCGATGTAGAGCATCGTCATTCATCGTACAGCTGTGAGGCCATGTGGCTTGTGTATTTGCAGCCGCAACTCAAGCGCGAGGAGTGGGCTGCCAATGAGGATCAGATTTTGTTGGCGGCAGCCAAAGATCATAAGATGCAAAATTGGGAAGCCATTGCGGCTAAGGTGGACCGGCGATCCGACTATCAGTGCTTTGTGCGCATGAAGACAGCGCTGCGCTCCCACCTGGAGCCAATCATGAAATGGGGCCGTCAGGATAGCGAACGTTTGCGCGCAATTGTTTTAAACAATACGGTTAACGGCGTTATTAACTGGTCTCAAGTGGCCGAGCACTTTCCGAACAGATCGCGATCCACATTAATTGGTCGCTATTTGTACGTTCTGCATCCCAGCATCAGTCATGAACCCTTCACCGAAAAAGAGGATTTGATGCTGTTTGCTGCCGTTGAGGAATACGAtggcaaatttaattgcattccgCGAACGCTTTTCCCCAATCGCTCGATGGCCCAGCTGCGTACACGCTATAATAATGTGTTGGCGCAGCGACATAAGACTGATCCCTGGTCAGTGAATGATGATATGAAACTGATTGCGTTCGTTAAAGCACATGGCACTTCGCAGTGGGTGAATTGTGCCAATTTTTTGGGCAATCACTCGCGCACCAGCTGTCGGACACGCTCTTTGGTCATCCAGCGTTTTATGGAGCAGCATCCAAACGCAACGGTGGCGAATATTCCACGTCGCAAGGTATACAAAAATGCTTCAGTGACCGCCGACAATTGGGAGCAACGTCTCTATGAATGGAAAGCCGATCCGGACTCACTGCTCAATAGCCAACCTGTCCAGAAGTCAAGAGCCAAGCAGTCATCACGTGGCAAGATCCCCAACATCTATGATTACTTCAAGTATGCCTATAATCTTAATCTACGATCGCCAGCGCCGCCAATACCGCTGCCCCTGGACAAACATAATCTGCACAGAGTAGCTAATGCGCTGCGCTTCCAGCCACCCGCAAGTAAGGTCATTATAATCCAAACCGCTTGCCTGCCCAGTCAGCTGTGTCgcttatttaacaaaatgctGTGTCAACTGCCCGCTCGCCAAGGAAGTGAATCATCTACGCAGTTGCTGCCGCCGAATTGGTCAACGATGATGGGCTTTCGGgccatttgcatattgtcGGGGCAATATAGCAATGAGGCCGATTCTGCGACCGTATTGAAACCAGAAATCAAATACGACGAATCTCAGCCGGCGGTTCAGCTGTTCCGGCAACGCTTACGAACCCTTTTCTATCGCACTACGCTGCTGAGCCGACTTGAGACGACGCTGTTCGAGGAGCTGCCGGCTGCATTGATGAAACTACCACGTCCAACTGCAAGTGTCGACACAGACAATAATGGCCCGACTCGCGAAAAAATAGAGCGCAAGCAAATTGAAGTTTTGAATCGGATGAAATCTGAGCAAACTGACCTTAAGGAGGAAATGCAAATACATTCAGATTAA
Protein Sequence
MCDVNSLKQEYQQQLQEITTLLLTTAKSDADPLQMNQDLQRRLEQMRQSILELLRIVRARYKRNEQILVSRQKTRTCNAGAAGTDEIVAISGAVLRGGTFRFKGNLYFRDVDGRSCPNNEDYERRCSNEMFPTDFDMRSKHVWTVMDKKNIVMGIKQQLLDHAAYTSTVDCTGRKRKAIDLHEQSLANLLKVADSSFSIDWNQISTLDVEHRHSSYSCEAMWLVYLQPQLKREEWAANEDQILLAAAKDHKMQNWEAIAAKVDRRSDYQCFVRMKTALRSHLEPIMKWGRQDSERLRAIVLNNTVNGVINWSQVAEHFPNRSRSTLIGRYLYVLHPSISHEPFTEKEDLMLFAAVEEYDGKFNCIPRTLFPNRSMAQLRTRYNNVLAQRHKTDPWSVNDDMKLIAFVKAHGTSQWVNCANFLGNHSRTSCRTRSLVIQRFMEQHPNATVANIPRRKVYKNASVTADNWEQRLYEWKADPDSLLNSQPVQKSRAKQSSRGKIPNIYDYFKYAYNLNLRSPAPPIPLPLDKHNLHRVANALRFQPPASKVIIIQTACLPSQLCRLFNKMLCQLPARQGSESSTQLLPPNWSTMMGFRAICILSGQYSNEADSATVLKPEIKYDESQPAVQLFRQRLRTLFYRTTLLSRLETTLFEELPAALMKLPRPTASVDTDNNGPTREKIERKQIEVLNRMKSEQTDLKEEMQIHSD