Basic Information

Gene Symbol
-
Assembly
GCA_035042385.1
Location
JAWNLK010000106.1:6115336-6117756[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 4.5 4.1e+03 -2.1 0.0 3 18 142 157 140 158 0.88
2 5 8e-11 7.3e-08 32.3 0.1 1 41 236 277 236 282 0.92
3 5 1.8e-05 0.016 15.2 0.0 2 43 292 337 291 340 0.85
4 5 2.5e-08 2.3e-05 24.3 0.0 2 46 347 392 346 392 0.93
5 5 9.8e-09 8.9e-06 25.6 0.0 3 41 400 439 398 444 0.96

Sequence Information

Coding Sequence
ATGTGCGATGTGAATAGTCTGGAGCAGAAatgccaacagcaattgcaagaAATAACAACACTGCTGTTTACCACAGCTGAAAGCGATGCAGACCCCTTGAAACTGAATCAGGAGCTGCAGCGGCGTCTCGAACAGATACTTCAACGTATTCTGGAGCTGCTGCGGATAGTCCGTGCTCGCTATGAACGGAACGAACAGATACTTATGAGCCGCCAGAAGACGCGGTCTTACAACGCACGAGTAACGGGCAGCGATGAAATCGTCGGAATGAGTGGAGCTGTGCTGCGCGGTGGAACGTTTCGATTTAAaggtaatttatattttcgcGATGTGGATGGACGAAGTTGTCCCAACAATGAGGACTATGAGCGGCGCTGCAGCCACGAAATGTTTCCCACCGATTTCGACATGCGCTCCAAGCACGTCTGGACGGTGATGGACAAGAAAAACATTGTAATGGGTGTTAAGCAGCAGCTTTTGGATCATGCCGCCTACACAGCGACTGAAGTCCAAACCGTTGGCAGGAAGTGGCGCAAACGTAAGGCCATCGATCTGCATGAGCAATCGCTGGCTAATTTGCTTAAAGTGGCCGACAGCAGCTTCAGCATTGACTGGAATCAGATCAGCACACTCGATCTGGAGCATCGTCATTCATCGTACAGCTGTGAGGCCATGTGGCTTGTGTACTTGCAGCCGCAAGTCAAGCGTGAAGAGTGGACTGCCAAGGAGGATCAGATATTGCTGACGGCCGCTAAGGACCACAAGATGCAAAATTGGGAGGCCATTGCGGCTAAAGTGGACCGGCGATCCGCCTATCAGTGCTTTGTGCGCATGCAGACAGCGCTTCGCTCTAAACTGGAGCCAACCAGCGCCATGAAATGGGGCCAGCAGGATAGCGAACGTTTGCGGGCAATTGTTTTAAAGAATACGGTTAACGGCGTTGTTAACTGGTCTCAAGTGGCCGAGCACTTTCCGAACAGATCGCGATCCACATTAATTGGTcgctatttgtattttctgcaTCCCAGCATCAGTCACGAACCCTTCACCCAAAAAGAGGATGTGATGCTGTTTGCTGCCGTTGAGGAATACGATGGCAAGTTTAATTGCATTCCACGAACGCTCTTCCCTAATCGATCGATGGTCCAGCTGCGTACACGCTATAAGAATGTGCTGGCACAGCGTCATAAGACTGATTCGTGGTCGGTGAGTGATGATATGAAACTGATTGCTTTCGTTGAAGCACATGGCACCGCGCAGTGGGTGAATTGTGCCAATCATTTGGGCAATCACTCGCGCACCAGCTGTCGCACACGCTCTATGGTCATCCAGCGTTTTATGGAGCAGCATCCAGATGCAAAGGTGGCGGATATTCCACGTCGCAAGGTGCATAAAAGTGCTTCCGTTACCGTCGACAATTGGGAACAATGTCTCCATCAATGGCAAGCCGATCCGGACTCAATGCTCAATAGCCCACCGGTCCAGAAGTCAAGAAGCAAGCAGCCATTAAGTGACAAGGTCTTCACCACCTATGAGTACTTCAAGTATGCCTATAATCTGAATCTACGATCGCCTGCGGCGCCAATACCACTGCCCGTCAACGAACGTAATTTGCACACAGTAGCTAATGCGTTGCGCTTCCAGCCACCCGCAAATAAGGTCAATATGATCCAAAGCGTTTGTCTGCCCAGTCAGCTGTGTCGCTTATTTAACCAAATGCTGTGTCAATTGCCTGCGCGCGAAGGAAGTGAATCGTCTACGCAGTTGTTACCGCCGAATTGGTCAACGATGATGGGCTTTCGGGCCCTATGCATATTGTCAGGGCAATGTAGCAATGATGCCGATTCTGTGACCACATTGAAACCAGCGATCAGCTACGCTGAATCTCAACCAGCGGTTCAGTTATTCAGGCAACGCTTACGGACTCTTTTCTATCGCACTACTCAGCTAAGCCGACTGGACACAACACTGTTCGAGGAGCTGCCGGCTGCGTTAATGAAACTGCCACGTCCAACTGTAAGTGTCGACTTGGCAGAGACCTTACCGCCAAGGGAACGGTCGCCAAAGCAGGAGACTcagccatacacacaccatAGTGGCCTGACTGCCCAAGAAATAGCGCGCAAGCAATTTGAAGATTTGGGTCGGATGAAATCTGAACCAACTGATCTTAAGGAGGAAAACCAAATACACTCGGATTAA
Protein Sequence
MCDVNSLEQKCQQQLQEITTLLFTTAESDADPLKLNQELQRRLEQILQRILELLRIVRARYERNEQILMSRQKTRSYNARVTGSDEIVGMSGAVLRGGTFRFKGNLYFRDVDGRSCPNNEDYERRCSHEMFPTDFDMRSKHVWTVMDKKNIVMGVKQQLLDHAAYTATEVQTVGRKWRKRKAIDLHEQSLANLLKVADSSFSIDWNQISTLDLEHRHSSYSCEAMWLVYLQPQVKREEWTAKEDQILLTAAKDHKMQNWEAIAAKVDRRSAYQCFVRMQTALRSKLEPTSAMKWGQQDSERLRAIVLKNTVNGVVNWSQVAEHFPNRSRSTLIGRYLYFLHPSISHEPFTQKEDVMLFAAVEEYDGKFNCIPRTLFPNRSMVQLRTRYKNVLAQRHKTDSWSVSDDMKLIAFVEAHGTAQWVNCANHLGNHSRTSCRTRSMVIQRFMEQHPDAKVADIPRRKVHKSASVTVDNWEQCLHQWQADPDSMLNSPPVQKSRSKQPLSDKVFTTYEYFKYAYNLNLRSPAAPIPLPVNERNLHTVANALRFQPPANKVNMIQSVCLPSQLCRLFNQMLCQLPAREGSESSTQLLPPNWSTMMGFRALCILSGQCSNDADSVTTLKPAISYAESQPAVQLFRQRLRTLFYRTTQLSRLDTTLFEELPAALMKLPRPTVSVDLAETLPPRERSPKQETQPYTHHSGLTAQEIARKQFEDLGRMKSEPTDLKEENQIHSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2