Basic Information

Insect: Drosophila mimetica
Gene Symbol: -
Assembly: GCA_037075245.1
Location: JBAMCH010000004.1:24593413-24595803[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.065 5 7.9 5.9 3 23 256 276 254 276 0.96

2 12 0.029 2.2 9.1 0.3 1 23 282 307 282 307 0.93

3 12 0.0025 0.19 12.4 0.7 1 23 314 339 314 339 0.94

4 12 0.00018 0.014 15.9 2.4 1 23 348 370 348 370 0.97

5 12 8.7e-05 0.0067 17.0 0.1 1 23 377 399 377 399 0.97

6 12 0.007 0.54 11.0 0.5 1 23 405 427 405 427 0.97

7 12 0.027 2 9.2 1.3 1 23 433 456 433 456 0.97

8 12 0.011 0.88 10.3 4.5 1 23 462 484 462 484 0.96

9 12 0.00032 0.024 15.2 2.4 2 23 491 512 490 512 0.96

10 12 1.5e-05 0.0011 19.4 1.5 1 23 586 609 586 609 0.96

11 12 0.041 3.2 8.6 7.1 1 23 615 637 615 637 0.94

12 12 3.4e-06 0.00026 21.4 2.3 1 23 643 665 643 665 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.065	5	7.9	5.9	3	23	256	276	254	276	0.96
2	12	0.029	2.2	9.1	0.3	1	23	282	307	282	307	0.93
3	12	0.0025	0.19	12.4	0.7	1	23	314	339	314	339	0.94
4	12	0.00018	0.014	15.9	2.4	1	23	348	370	348	370	0.97
5	12	8.7e-05	0.0067	17.0	0.1	1	23	377	399	377	399	0.97
6	12	0.007	0.54	11.0	0.5	1	23	405	427	405	427	0.97
7	12	0.027	2	9.2	1.3	1	23	433	456	433	456	0.97
8	12	0.011	0.88	10.3	4.5	1	23	462	484	462	484	0.96
9	12	0.00032	0.024	15.2	2.4	2	23	491	512	490	512	0.96
10	12	1.5e-05	0.0011	19.4	1.5	1	23	586	609	586	609	0.96
11	12	0.041	3.2	8.6	7.1	1	23	615	637	615	637	0.94
12	12	3.4e-06	0.00026	21.4	2.3	1	23	643	665	643	665	0.99

Sequence Information

Coding Sequence: ATGAACGAGGGGAGCCAGTACTCCATCCACACGGTGTGTCGCACCTGCCTGTCCACGCTGGACGACGCGGCGGCCTACGATCTGTTCCGAGTGCCCGGCCTGGCCAAAAAGCTGTGCGTGTGCACCTCCCTGTCCGTGGAGCAGGCTGATGGCTTCCCCAAGAACCTGTGCACCCTGTGCTACTCGAAGCTGAACGACCTGCACGACTTCCAGAAGCAGTGCGTCGACTCGGTGCAGAAGTTCCAGGATCTGGTCGCGAGCAACGCCTTTGTCTGCCAAACCAGTTTCGATGTCCTGGACACCAGCGCCGCCGTGGCGGATCTCCccggggaggaggaggacaacGTGCACTTTGATCCGCTGCTCAACTCCAAGATCGAGATCATCGAGAACGAGGAGGATGTCTTCAAGATGCTCGAGTCCGTCGAAAAGGAGGTCGAGGAGGtggaaatggagatggagcAGCCGTTTGGCGAGGAATCGCAGGACGACTCCTTCGAGAGTGGCAACGACAACGACCTGGACGCGGACTTCCAGCTGAACAGCAGCGACGACGACATTCCGCTGGCCCAGCGCAGCCGGCGTGGCAGTGCGCGCGGTTCCAAGGCGGCCAAGGGCAAGTCGAAGGCGTCTGCCAAGCGGGAGGATGCGGAGGAGGAGTCCGAGGACTCCAGCTCCTCGGAGGACTCTGATGGCAATCCCAAGGACAAGCCCAAGCGCAAGAGGATTCCTGCTCAGGAGCGGGATCGCCACCGTCTGATAGATTGCCACATCTGCCACCAGAAGTTCAAGAAGGCGATCCGTTACGAGGAGCACATGAAGCACCACAACGATCTGCTGCCCTTCCAGTGCACCGTGGAGAGCTGCTTAAAAGGCTTCACCACCGCCAATGGGCTGCGAGTCCATGTGGAGCACGCCCACACGGAGACATCGGCCATGCATCCGTGCACCTATGAGGGCTGCAACAAGTCCTTCGCCCGGCCCGTACTGCTCAGCTTCCACATGAAGCGCGTCCACAAGGTGGACACACCGCAGCGGGATTTCCCCTGCACTGAGTGCGAAAAGGTTTTCCGCTGTCCCACCGCCCTCAAGAAGCACATGTACAAGCACACCGGCGAGGAGCTGCCCTTCGCCTGCGAGATCTGCGGCAAGCGATTCCCGATCAACAGTGTGCTGCGCGACCATCTGCTGCGGCATGCGGGCATCAAGAACCATGTGTGTCCGTACTGCGGCGTGGGCAAGACGACGCGCCAGGAGTGGAACAAGCACATCCTAACCCACACCAAGGAGAAGAAGTACGAGTGCCGGCAGTGCGACCACGCCTCCCACAATAAGCAGGCTCTGGCCAACCACGTGAAGGTGGTGCACGAAAAGCGTAAGGACTTCGCGTGCCAGTACTGCGGAAAGACCTTTGGCAAGTCGCACGCCTGCAAAATTCACGAGCGGAGTCACACCGGTGAGAAGTGCTGCGAGTGCAAGATCTGTGGCAAGGTGTTCCTCTTCGAGAAGGGCCTGACCAAGCATTTGAAGACGCACGAGAAGCGCGATCTGCCCAAGACGCAGGGGGCCAATCCCCTGATGGGCGACGGAGCCAGTGGCTCCGCCTCGACCATTGCGAAGCCCAGTCCGCATCTGCGAGGTCGCGTCGAGCGCGTGGACATTGCCCAGCTGGCGGGAACGGTGGCCAATCCGATTCCATCGGTGAATCTTCCCTCATGGTCGCCACAGGTGAACTTCACCAAGAAGGAGGGTCAACACATCTGCCCCGATTGCGGCAAGGGCTTCAACCACGTGAGCAACATGAAGCTGCACTACAAGGTGGTGCACCAGAAGGTGAAGGACTTCTGCTGCCGCTTCTGCCCCAAGCGATTCGCCAAGAAGCAGTATCTGCGGCACCACGAGTACATTCACACCGGCGAAAAGCCGTACGAGTGCAAGGTGTGCGGCAAGCACTTCCGCCAGGAGCAGGTGCTCAAGACGCACATGAAGGTGCACGACAAGCCGCCCCGTCCGCCGGGCAAACCCAAGGAGGCgacgggtccaaagtccgagACGAACACCACGGTGAAGCGCCAGCAGCCGAAGAACTTCGAGCAGTATCAGGATCCTGCAGCGGAACGGGCTGCGGCCACCGCCGAGCTGCTGGCCTACCAGATCGAGGAGAACGAGGCCAAGCGCAAGGCGGAGGCGGAACTGCGAAAGATCCAGGAGGCGGCCTTCGAGCAGCTCAACAAGCTGCAGAAGCAGACAAACACCTACGATGGCTTCTACGCCCAgaaggcggaggcggagggcACCTCGGTGGATGCCCTGAAGCTGGACCATGTTTGA
Protein Sequence: MNEGSQYSIHTVCRTCLSTLDDAAAYDLFRVPGLAKKLCVCTSLSVEQADGFPKNLCTLCYSKLNDLHDFQKQCVDSVQKFQDLVASNAFVCQTSFDVLDTSAAVADLPGEEEDNVHFDPLLNSKIEIIENEEDVFKMLESVEKEVEEVEMEMEQPFGEESQDDSFESGNDNDLDADFQLNSSDDDIPLAQRSRRGSARGSKAAKGKSKASAKREDAEEESEDSSSSEDSDGNPKDKPKRKRIPAQERDRHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTVESCLKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTPQRDFPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDHLLRHAGIKNHVCPYCGVGKTTRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVKVVHEKRKDFACQYCGKTFGKSHACKIHERSHTGEKCCECKICGKVFLFEKGLTKHLKTHEKRDLPKTQGANPLMGDGASGSASTIAKPSPHLRGRVERVDIAQLAGTVANPIPSVNLPSWSPQVNFTKKEGQHICPDCGKGFNHVSNMKLHYKVVHQKVKDFCCRFCPKRFAKKQYLRHHEYIHTGEKPYECKVCGKHFRQEQVLKTHMKVHDKPPRPPGKPKEATGPKSETNTTVKRQQPKNFEQYQDPAAERAAATAELLAYQIEENEAKRKAEAELRKIQEAAFEQLNKLQKQTNTYDGFYAQKAEAEGTSVDALKLDHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00487459;
90% Identity: iTF_00494575;
80% Identity: -