Dmic010631.1
Basic Information
- Insect
- Drosophila micromelanica
- Gene Symbol
- bab1
- Assembly
- GCA_004143905.1
- Location
- SCDX01000359.1:2499-5002[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-18 1.1e-14 53.7 0.0 1 43 55 98 55 100 0.95 2 2 2.4 5.3e+03 -3.0 0.8 9 17 228 239 219 247 0.50
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCACGCTTGGATGGGCGCAACTGGTTCGTCACTTGCAGCAGACAGCTACCAATATCAGCTGCAATCGATGTGGCAAAAGTGCTGGAACACCAATCAGAATCTGATGCATCATATGCGATTTCGCGAGCGCGGCCCGCTTAAATCCTGGCGTCCCGAGACGATGGCCGAGGCCATATTCAGCGTGCTCAAAGAGGGCCTCTCGCTGTCGCAGGCGGCGCGCAAGTACGATATACCCTATCCGACGTTTGTGCTGTACGCGAACCGGGTGCACAACATGCTGGGGCCCTCGATCGATGGCGGGCCCGATCTGCGACCGAAGGGACGCGGACGGCCGCAGCGCATTCTGCTGGGCATTTGGCCGGACGAGCACATCAAGGGCGTCATCAAGACGGTCGTGTTTCGCGACACCAAGGACTTGAAGGATGACAGCCTGGGCGCTCACATGCCGCCGTACGGACGGCATTCGCCCGTGTTTCCCTTGCAGGACATGGCGCTGAGCTATCCGGGCGCTAGCGGAGGCATGCCGGGCAGCGGCGCCGCCGGCCTCAGCGCCTTGGCCTGCCCCAACGGCATGGGCAGCGGCAACGTGGGAGGTGCAGGTGGCGTTGGTGCTGGCAGCGGCGCTGGCGGCGCCGAGCAGCAGATGTCGCAGGAGCAGATGTCGGCGGTGGCCGCCGTTGCGCACAACATACGCCAGCAGATGCAGATGGCCGCCGCCGCGCAGCATCAGCACGGGGAGGCGGGGCCGCCGGGCGGACTGTTCAATTTGCCGCCGCATTTGGGCGGCGGCGGGCCGGGTGGACGGtccaagtccagcCCGCTGCGCAGCGGAACACCGCGTCTGCATTCGCCGCTGGCCGAGCTGGGCCTGGACATGGCCTACAAGCGGGATTATTCGCCGACGCGCCTCTTCGCCGAGGATCTGGCGGAgctggtgggcgtgggcaTTGCCGCCTCCAGCTCCACCTCGCCGGCGACCAGCgccaacacagcaacaacaacagctccggCGGCAGCCACAACTGACAtctgcaccagcagcagcggcgccggcggcggcggcatcaaAGTGGAGCCGATCACCACCAGCGGCGAGTAA
- Protein Sequence
- MMENSHAWMGATGSSLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDLKDDSLGAHMPPYGRHSPVFPLQDMALSYPGASGGMPGSGAAGLSALACPNGMGSGNVGGAGGVGAGSGAGGAEQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPPGGLFNLPPHLGGGGPGGRSKSSPLRSGTPRLHSPLAELGLDMAYKRDYSPTRLFAEDLAELVGVGIAASSSTSPATSANTATTTAPAAATTDICTSSSGAGGGGIKVEPITTSGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00541686;
- 90% Identity
- -
- 80% Identity
- -