Dmea010299.1
Basic Information
- Insect
- Drosophila melanica
- Gene Symbol
- bab1
- Assembly
- GCA_004143765.1
- Location
- SCDT01001137.1:18211-20659[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-18 1.3e-14 53.8 0.0 1 43 55 98 55 100 0.95 2 2 1.6 6.6e+03 -2.9 0.8 9 17 228 239 219 247 0.50
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCACGCTTGGATGGGCGCAACTGGTTCGACACTTGCAGCAGACAGCTACCAATATCAGCTGCAGTCGATGTGGCAAAAGTGCTGGAACACCAATCAAAATCTGATGCATCATATGCGATTTCGGGAGCGCGGCCCGCTCAAATCGTGGCGTCCCGAGACGATGGCCGAGGCCATTTTCAGCGTGCTCAAGGAGGGCCTCTCGCTGTCGCAGGCGGCGCGCAAGTACGACATACCCTATCCGACGTTTGTGCTGTACGCGAACCGGGTGCACAACATGCTCGGACCGTCGATCGACGGCGGGCCCGATCTGCGGCCGAAGGGACGCGGACGACCGCAGCGCATTCTGCTGGGCATTTGGCCGGACGAGCACATCAAGGGCGTCATTAAGACGGTCGTGTTTCGCGACACCAAGGACTTGAAGGACGACAGCTTGGGCGCCCACATGCCGCCGTACGGACGGCATTCGGACATGGCGCTGAGCTATCCGGGCGCTAGCGGAGGCATGCCGGGCAGCGGCGCCGCCGGCCTCAGCGCCTTGGCCTGCCCCAACGGGATGGGCAGCGGCGGCGTGGGAGTCGGCGTTGGAGGTGGCGGTGGAGGTGGCGTTGGCGCTGCCGGCGGCACCGGCGGTGCCGAGCAGCAGATGTCGCAGGAGCAGATGTCGGCGGTGGCCGCCGTTGCGCACAACATACGCCAGCAGATGCAGATGGCCGCCGCAGCGCAGCATCAGCACGGGGAGGCGGGGCCGCCGGGTGGGCTCGGAACGCCGCGTCTGCATTCGCCGCTGGCCGAGCTGGGACTGGACATGGGCTACAAGCGTGACTATTCGCCGACGCGCCTCTTCGCCGAGGATCTGGCGGAGCTGGTGGGCGTTGGCATTGCCGCCTCCACCTCCACCTCGCCGGCGACCAGCGCCAacaccgcaacaacaacagctccagCGACAACCACGACAGACATctgcaccagcaccagcagcagcagcggcggcggcggcatcaaAGTGGAGCCCATCACCACCAGCGGCGAGTAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDLKDDSLGAHMPPYGRHSDMALSYPGASGGMPGSGAAGLSALACPNGMGSGGVGVGVGGGGGGGVGAAGGTGGAEQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPPGGLGTPRLHSPLAELGLDMGYKRDYSPTRLFAEDLAELVGVGIAASTSTSPATSANTATTTAPATTTTDICTSTSSSSGGGGIKVEPITTSGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00547283;
- 90% Identity
- -
- 80% Identity
- -