Dmet001071.1
Basic Information
- Insect
- Drosophila mettleri
- Gene Symbol
- stc
- Assembly
- GCA_035047625.1
- Location
- JAWNPI010000018.1:12705242-12708665[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.2e+04 -3.6 0.5 15 18 353 356 352 357 0.79 2 15 2 1.7e+04 -4.1 1.6 15 19 380 384 379 384 0.81 3 15 0.066 5.7e+02 0.6 2.3 4 11 413 420 412 421 0.90 4 15 5.8e-07 0.0051 16.8 15.1 1 19 425 442 425 442 0.93 5 15 1.7 1.5e+04 -3.9 0.9 6 10 468 472 467 472 0.88 6 15 2.2e-08 0.00019 21.3 13.6 1 18 478 495 478 496 0.98 7 15 2 1.7e+04 -6.2 4.1 7 13 500 506 500 507 0.77 8 15 2e-09 1.7e-05 24.7 12.9 1 19 536 554 536 554 0.98 9 15 2.4e-05 0.2 11.6 17.0 4 19 602 617 595 617 0.88 10 15 0.057 5e+02 0.8 11.6 1 11 657 667 657 679 0.79 11 15 2.8e-10 2.4e-06 27.4 15.1 1 18 684 701 684 702 0.97 12 15 1.2 1e+04 -3.4 0.8 6 10 731 735 730 735 0.85 13 15 2 1.7e+04 -6.7 9.7 10 18 749 758 739 759 0.80 14 15 5.4e-08 0.00047 20.1 10.8 1 16 795 810 795 817 0.95 15 15 4.6e-08 0.0004 20.3 13.2 1 19 827 846 827 846 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAgtattggcagcagcagcagcagcagcagccgcaatcgcagtcgcagccgcagccacaggaACCGCTAACAAATGGAGTTAGAGAGGCAGCAGGCTCCAGCACAGCTAATGgcccaaataataataataattatgtaaatttcaatcaattcATCAGTCAACATAATTTGGCAAGCTCCTCCTACAacgttggcggcggcggcgccttTGGCTTAACGTCCAACAGCGGCGGCGTCTCCAATAATtTATATGCGCCAAGCTTCTATGGCAATCAAAATGGCGACTGTTAcactgcagctggagcagctgttACTTATCCGGTTGCCTATCAAAATCCCTATGCATCCCTGGGCCATAATCCGTTCGCTGCCTCTGGTGCtggctcttcttcttcttcggctGGTTATGATATCAGTGCTTCCAAGCTGCACGCAACGGCGCCCGAATTTGTGCCCAATTTTTCGAAGCTCAGCCtaacgtcagcagcagcagcaacagcagcaacagcagcgccagctaCAGAAAATGCCTCTGTTAaaaatcacaacaacaacaacaacaacactgcCACACAGCCaaatggagcagcagctgtggccGGGAActcagcgcagcagcagaggcaagcGAAGCCACATGGCAGCAGCACTGGTGGAGGTGGCGGCGCCGGCGGTAACAATACTCGCCAGCAGCGACGCAACGATTATCGTGAGGAGCGCAACGAGGAGCGCTATGAGCGCGGCAAGAAGCCGCAGAAACAGCAACGTTATGAGAATCATCGCAGCAACAAGCGACGCGATGACTGGAATCGAAATCGTGATCGCATCAATGGATATCCCCGTGCCGCCGAGGAACTGGACACAAGCAATAGCAACGACAGCGCGCAGACCTCACCggagaagcagcagcatcagcagatATCGCCGCGACGCGCACCTGACCTGGAGAAGCTGTCGCAGCGTGAGAAGCTAATGCGTGACATTGAGCAGCGCCGGCTCGAGTGTCTCGTCTGTGTGGAGCTGATCAAGGCGCATCATGGCACCTGGTCGTGCCAGAATTGCTATCATGTGCTGCACCTGAAGTGCACCATCACCTGGGCGAGCAGCTCGAAGTCGAACGAGGGCTGGCGCTGTCCGGCCTGCCAGAATGTGCTGCAGGAGCTGCCGCGCGAATATCTATGCTTTTGCGGCAAGCTGAAGAATCCGCCGTTGACGCGCAACGAGCTGGCCCACAGCTGCGGCGAGCCGTGCTGTCGCGTCGAGGGCTGCAGCCATGCGTGCACATTGCTCTGCCATCCGGGGCCGTGTCCGCCGTGTCAGGCGAACGTGAATCggagctgcggctgcggtCGCACCTCCAAAATGATGCAGTGCGCCATGAAACAGCCGGTGCAGTGCGAGGCCATTTGCGATAAGCTCTTGAATTGCGGCGAGCATCGCTGCCAGCAGCCGTGCCATGCGGGCAAGTGTGAGGCGTGCGCGGATCAGGTGCAGCAGCATTGCCATTGCGGCAAGCAGCAGCGCGATGTGCTGTGCACGCGCGAGACCCAGGACAAGCGCAGCTATTCGTGCAAGGAGTGCTGCGGCAAGCCACTGCCGTGCGGCAATCACAAGTGCAAGGATTCGTGTCATGCCGGCGCCTGTCGCCCCTGCAAGCTCAGTCCCACACAGATCACCAGCTGTCCATGCGGCAAGCTGCCGGTGCCGGCGGCACAGCGCACCAGCTGCCTGGATCCGGTGCCCACGTGCGAGGGCACCTGCAACAAGACGCTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAGTGCCACCTGGGCCAGTGTCCGCCCTGTCCGAAACAAACGGCTGTGAAGTGCCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGGCAGCTGTCGACGCGCGCGGACGATGCGCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGCGGCAAACACAAATGCAACGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGCTGCCCTGCAATCGCACCTTGAGCTGCGGCCGGCACAAGTGCGACCAGCCCTGCCATCGGGGCAACTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAACTGTACTGCGAGTGCGGCGCCGAGGTCATCTATCCGCCGGTGCCGTGCGGCACCAAGAAACCCGCCTGCAAGCGCCCCTGCTCGCGCACCCACGGCTGCGAGCATGCGCCGCAGCACAATTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACGAAATGGTGTCACGGCAATCATGAGCAGCGCAAGACCATACCCTGCTCCCAGGCCAGCTTCAGCTGCGGCTTAGCCTGCGGCAAGCCGCTGGCGTGCGGACGACACAAGTGCATACGGTCCTGCCACGAGGGCGAGTGCCAGCAGGCGGGCGAGCTGTGCCGCCAGAGTTGCGCCAAGCCGCGTCTGTCGTGCGGCCACAAGTGCGCCGCCGTCTGCCACGAGGGCGACTGCCCCGAAACGCCCTGCAAGGAGCTGGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAATCGCAGCTGCCAGGAGCTGGCGCGCGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATTCTGGCgcccaacaaaaacaacaagtccAACAAGACCCTGGACTGCAATGATGAGTGTCGTCTGCTGGAGCGCAATCGTCGTTTGGCCATTGGCCTGCAGTCGCGCAATCCGGATGCCCATCTAAAGTCGCTCACCAAGTACTCGGAATTCTTGCGTGGATTTGCCAAGCGCAATCCGGCGCTCACGAAGACCGTCTACGAAACACTCAGCGATCTGGTGAAGCTGGCCAAGGAGAGCAAACAGAAGTCGCGCAGTCACTCCTTTCCCACCATGAATCGTGAGAAGCGCCAACTGGTGCACGAGCTCTGCGAGGTGTTCGGCGTCGAGTCTGTCTCGTACGACAAGGAGCCGAATCGCAATGTCGTTGCCACCGCGCACAAGGAACGCTGCTGGCTGCCGGCTACGAGCATCATGGAGGTTCTGGCACGTGAATCGGGGCAGCGGCGTGTGCCTGTGCCCAGCAACAATGCCTGGAACCtcaaaaagtga
- Protein Sequence
- MAEYWQQQQQQQPQSQSQPQPQEPLTNGVREAAGSSTANGPNNNNNYVNFNQFISQHNLASSSYNVGGGGAFGLTSNSGGVSNNLYAPSFYGNQNGDCYTAAGAAVTYPVAYQNPYASLGHNPFAASGAGSSSSSAGYDISASKLHATAPEFVPNFSKLSLTSAAAATAATAAPATENASVKNHNNNNNNTATQPNGAAAVAGNSAQQQRQAKPHGSSTGGGGGAGGNNTRQQRRNDYREERNEERYERGKKPQKQQRYENHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQTSPEKQQHQQISPRRAPDLEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSNEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHSCGEPCCRVEGCSHACTLLCHPGPCPPCQANVNRSCGCGRTSKMMQCAMKQPVQCEAICDKLLNCGEHRCQQPCHAGKCEACADQVQQHCHCGKQQRDVLCTRETQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPAAQRTSCLDPVPTCEGTCNKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPACKRPCSRTHGCEHAPQHNCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRSCHEGECQQAGELCRQSCAKPRLSCGHKCAAVCHEGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNDECRLLERNRRLAIGLQSRNPDAHLKSLTKYSEFLRGFAKRNPALTKTVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWNLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- -
- 80% Identity
- -