Dmet010302.1
Basic Information
- Insect
- Drosophila mettleri
- Gene Symbol
- -
- Assembly
- GCA_035047625.1
- Location
- JAWNPI010000098.1:1346598-1351828[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0065 0.44 11.1 0.6 1 23 145 167 145 167 0.98 2 14 4.8 3.3e+02 2.0 7.0 1 23 173 196 173 196 0.97 3 14 0.00013 0.0089 16.4 1.3 1 23 392 414 392 414 0.98 4 14 1.6 1.1e+02 3.6 0.8 1 23 420 443 420 443 0.94 5 14 0.27 18 6.0 0.4 1 23 470 493 470 493 0.94 6 14 0.0044 0.3 11.6 3.9 3 23 759 779 758 779 0.92 7 14 0.046 3.1 8.4 1.4 1 23 785 808 785 808 0.98 8 14 0.0099 0.67 10.5 1.8 1 23 888 911 888 911 0.97 9 14 0.0018 0.12 12.8 0.5 1 23 1117 1140 1117 1140 0.91 10 14 0.00029 0.019 15.3 4.2 1 23 1153 1175 1153 1175 0.98 11 14 0.00011 0.0072 16.7 0.1 3 23 1182 1203 1181 1203 0.97 12 14 0.0012 0.082 13.4 4.2 2 23 1212 1236 1211 1236 0.89 13 14 0.044 3 8.4 0.6 1 23 1241 1263 1241 1263 0.97 14 14 0.004 0.27 11.7 2.0 1 23 1269 1292 1269 1292 0.97
Sequence Information
- Coding Sequence
- ATGGCGCACAAGCGATTAAAAACAGAGGACATGGAAGCGAACTACAAATTTTCGTGCCGTTGTTGCCTCAAGTCTGAGGCAGAATTCTACAAACTGGACTCGTTGATCGACTGCGGCAGTGACGAAAGTGACGCGTCTTCCACAAAAATACCCCTGCTACGCTTACTATTATTCTGTATGCGTATTGAAAATCAGCCCGAGCTGCCGCAATACATTTGTGTGGAGTGTAGTAAAAGTTTGCAAATCGCCTACTATTTCATACAGAACGGCCTGCGAGCACATGAAATACTCTGTCGTAAACTGTGCCCTAGCAAGTTGAACAGCCGTTCGCGCTCTAATGGCCAACAAACACAGTGGCTCGAGTTGAACGAGAGTGAGGACGCGCCGCAGTCCAGGCACTGGGAGATAAAGCCACAAAAGCCCGAAGTGCGACACGAATGTAAGGTGTGTGGCGTCATTATATACAATCGCATGGAGATGAAGCAGCATATACGAATGCACGCAGATTCACCGAGTCATAAATGCAAACTGTGCAGATTTGTCACGTTCAAGCATCGCCAACTGCTGGAGCATTATCGAAAAGTACACAGTCTGACGGCTGTCCAAATCGAAAATCAGCTTAGGATCCGAAGATCCATGCAGACAACAGCAAACGCAATAACAGCGCCGACAAGAATACCAATAGACTCAACAGCTGGCGGTGAGCAAGTGAAGGTTTGCACTCTGGAGGATATGGAACTTCTAATACCCACTGTGCTGACACCAGAAGACTTTTCGCGCCCTCAACTTGATGCGGATCAACTGCGGGACATAGAGCAACAATTGGCAAATTCATTGCCAATTACACAGTccaccagccagccagcgaaGCCAGCAGTAGGGACGGGGAATACTGCGAATGTAAGCATTGGTGCAGAATTTTTGGTCATGCCCGATGGCTCATTACAGCAAGTGAATGATGGCGGTGTGGTATTCGAATACATTGACGATAGCAAAAGCGCCAATGCGACAAGTAATATGACATTGCAGAGTCTATTGGATGACTCCAAAGACGATGTTACATATAATGCAATGGATATCGACTTAAGTCGTATGGTTGTGGACAATACGTTGCCACAGATAACAGTTAAGACAAAACCGCGCCCAGCCCCAGCGTCCACTGGCGCCTTGAAACATAAATGCAAACTGTGTCCAAAAGCATTTCCCACGGTGGCACGTCTGAAATCTCATCAATTAACTCATAGTCATTTGCCTAAATTCTATTGCGATCAGTGCTCCTATTATTCGCTTCGTAGCGCCGATCTCATTCAGCATTATACGACAGAGCACAAGTCCTGCGTTAACGAAAGTCGTTCGAATCAATTGGATAGATCACAGTTGACTATACCGGTGGACAGAAGTCGCATTTATTCCTGCGACTTGTGTTTGTTTGAAGCATCAACCAGTGGCCAATTGCGGGTGCACTACAGCAATAAGCATCTGATTGTACCCAGTGAGGTGCAGCTGCGGCCTAGTTGGACGCATGAGCCAAGGCAAAGGAGCGGAAATACAATGCTAAACGCTTCCAGTCAGCCCGATATTCCACTAGGCATCAAATATCCCCCCGTGAagtcaacaataacaactgcagcaacctcaacaacaactgcattGGATCAGACGGTTTTGGCACCAACCACAACGGTGGTATCACCTATGAATGACCTTAATGTTGTGGTCGATACCACATCATTGTTCtatgcagcaactgcagagCAATTACCAAATACTAGTGTTGCAACATCAGTACCAACGGCAGTAACAGACTCAAACACATATGCAATATTTCCCGAGCAATCTTTTGCCAGCAGTCTAACAACACCAACAGTAACCCCGACCTCAATTTCAGTAGATACAAATAATGGGgcaaccgcagcagcggcTATAACAAATCAAAACACAAGCATATTCGGTGATATGCAGGATTTTATAGATAATACCGATGTGGCTGCCATTTGCACCATACCCGCAGATGACATGCCTGTTGTTGATGGAGACGATATTGTtattgacaataataatatcagcTTAGATTTTGATGCTGAAAATCTATTTGACGAATTCGAAGATGTTGAGGTTGGCGATGAAGACGAGGATGACGAAGAAGATGCTGAAAATGaggatgaaaatgaaaataacgaTGCGGCTACCGACCAAAATCTGTTGCTCACCAGTGACGATGACGATGTCGATGACTTTGATGATGAGCAATCAAAGCATCTGCAGAAACCGTATTGCATCCATTGTAATAAAAAGTTCACCAGCCAATATAAATTCGAGAATCACATGTTTGTGCACCGCGGTTTGGCGCCGTATCGCTGTGAGCTGTGCACTAACCTGTACAATATGAAGCGTCTGCTCATCCGGCATTACAAGACGGTGCATAAGCGCATGCCCACACGGGACATGGTGCAGGCCAAGGGCGACAAAGTGTCAGTGGCTCGCACAACCATTGAAAAGATAAATGTTCATGCTGATAAAACACCCACGCTGATGTGTGCGAAATGTCCATTTGAATGCGATATGGAGGCGGAAATGTGCAAGCATTTAAATGCTCATCATGGCATCAATGATGGtgGTTCTACGCTTGCCAACGAGGTGTTTATCATACGCAAACTGCCCTACGACTGTCCTCGCTGTATTCGGTCTTTTGCAGCTAAACACACTCTTACGCGACATTTGCAACGTAGTCATTTAGTGGATACAATTATTGAGATGCAGGCGCCTCAATTGACAACTAGTTCAGCGGCCACCACGACCACATCGACGGCAACAACCACATTGCCCCTGAATGCCAGTGAGGGCAATaatacaacaaacacaaacatatccGGAGCAACTACTCAATTGGATTCAAACACGGTGCAGCATTTCGCTGGCTCTATAGATGATAATGGCGATATTGAAGGCGAGGGCGAAGGCAATGGAAAATGCGACAGGGACACAGGATGTACAGCGGAAAATGTAAACATGGATAAACAAACAGAGGCACAACAGACAAACGATATAGCAACTACTGAAACTGCAACAGAAGCTGACAGGCcgtcaataaaaacaacaacagctgaagAAGGGTCAACAAGCATAACAACCGCTGGTTCAACACTATTTCCAACGCCCACGCCATTTGACTTTGATCTAGACTTTATGGGGGATGGTGAGCATGCCACGGCCCTTAAAAACAACGACAGTTTCAACATCGTACCAAACCCCAGTCATTTATTAAATGGAACCGATAAGCTATTGACTGCAGCGTTGGAGCCATCGCCTGTTAAAGATCTTCGGGGTCGTCTGCCCCGTACACCAATTTTTGTGTGTAAGCAATGTAATAAAACGTTCAATGAGCTTGGCAAACTGGTGCAGCACGAATTGGAGCAACATTCCAGTGGTATTGTATCGCCTCGCACCAGTTACCAGCATCAGTGCAAAATCTGCAATACAACATATCGTACCGTGACACTACTTAACTATCATATGAAACGGCATACGCCAGTAATAGTTGCCTGCAAACAGTGCCCCAAAGAATTTGCAAACATCTCCGATTTGGAACAGCATTTATTGACAGAACATAAAGTCGGTGTACAGGCGCCACTCAAATGCGGCGTTAATGGCTGCACAAAGACATTTAACTACAAACATCATCTGAAGCGTCATCAAACAGCCTCACACACGCCCGTGCAGTATATCTGTCCGGAATGTGGGCGCGATATGCTTACTAGTTTGCATCTCAGGAATCATATGTCCAGCCACAAGAGCACACATTCTTATAAGTGTCCTAAATGTGTGCGTACATATATGAGACGTAAACCcTTTCGTAGACATGCGCAACGGGAGCACAAGTGGGAGCTGACCGAGCAGGAGATAGATCAAATTTATTGTGTTAATGAGACATCGCCATCAAGTAAATTGCGCGGACGTAGCTCGTTGAAGGTTGATATCGAGCAGTCTGATTAG
- Protein Sequence
- MAHKRLKTEDMEANYKFSCRCCLKSEAEFYKLDSLIDCGSDESDASSTKIPLLRLLLFCMRIENQPELPQYICVECSKSLQIAYYFIQNGLRAHEILCRKLCPSKLNSRSRSNGQQTQWLELNESEDAPQSRHWEIKPQKPEVRHECKVCGVIIYNRMEMKQHIRMHADSPSHKCKLCRFVTFKHRQLLEHYRKVHSLTAVQIENQLRIRRSMQTTANAITAPTRIPIDSTAGGEQVKVCTLEDMELLIPTVLTPEDFSRPQLDADQLRDIEQQLANSLPITQSTSQPAKPAVGTGNTANVSIGAEFLVMPDGSLQQVNDGGVVFEYIDDSKSANATSNMTLQSLLDDSKDDVTYNAMDIDLSRMVVDNTLPQITVKTKPRPAPASTGALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCSYYSLRSADLIQHYTTEHKSCVNESRSNQLDRSQLTIPVDRSRIYSCDLCLFEASTSGQLRVHYSNKHLIVPSEVQLRPSWTHEPRQRSGNTMLNASSQPDIPLGIKYPPVKSTITTAATSTTTALDQTVLAPTTTVVSPMNDLNVVVDTTSLFYAATAEQLPNTSVATSVPTAVTDSNTYAIFPEQSFASSLTTPTVTPTSISVDTNNGATAAAAITNQNTSIFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFDEFEDVEVGDEDEDDEEDAENEDENENNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIHCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVARTTIEKINVHADKTPTLMCAKCPFECDMEAEMCKHLNAHHGINDGGSTLANEVFIIRKLPYDCPRCIRSFAAKHTLTRHLQRSHLVDTIIEMQAPQLTTSSAATTTTSTATTTLPLNASEGNNTTNTNISGATTQLDSNTVQHFAGSIDDNGDIEGEGEGNGKCDRDTGCTAENVNMDKQTEAQQTNDIATTETATEADRPSIKTTTAEEGSTSITTAGSTLFPTPTPFDFDLDFMGDGEHATALKNNDSFNIVPNPSHLLNGTDKLLTAALEPSPVKDLRGRLPRTPIFVCKQCNKTFNELGKLVQHELEQHSSGIVSPRTSYQHQCKICNTTYRTVTLLNYHMKRHTPVIVACKQCPKEFANISDLEQHLLTEHKVGVQAPLKCGVNGCTKTFNYKHHLKRHQTASHTPVQYICPECGRDMLTSLHLRNHMSSHKSTHSYKCPKCVRTYMRRKPFRRHAQREHKWELTEQEIDQIYCVNETSPSSKLRGRSSLKVDIEQSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512961;
- 90% Identity
- -
- 80% Identity
- -