Dmet013465.1
Basic Information
- Insect
- Drosophila mettleri
- Gene Symbol
- ftz-f1
- Assembly
- GCA_035047625.1
- Location
- JAWNPI010000103.1:25131549-25142338[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.53 4.6e+03 -3.4 17.2 63 159 51 155 15 171 0.41 2 3 5.7e-20 4.9e-16 59.1 0.2 1 82 332 412 332 460 0.72 3 3 6.9e-72 6e-68 230.1 1.7 164 408 540 777 503 779 0.92
Sequence Information
- Coding Sequence
- atGTTATTAGAAATGGATCCCCAACAGGCGACTGTACAGTTTATTTCGTCGCTGAATCTTTCACCATTTAGCATGCAGCTTGATCAACAACCAGCGAGTCCTGCGCAGAgtaacaccaacaacaataacagcagcagtagtggaaacaacaccaacaataataataacaacaacaataataataataataataataataataataataataataataacaataatagcaacaacgaTAACGAAACAAACCCTTTAAGCAATTCCGATAACGATTACAACTCCTACACGCTGCAGTTGGGAAATCATCAACAGCACCAACCGCAGCAGCTCCATAATACGCATaatcagcaacatcaacaacattaccagcagcaacatcaaaatATTGCCAGTAACAATGCGAATAATGCAGCGAACCAATTCAATGGCTCATCTTATtcgtatatatacaatttcgaTTCACAGTATATATTTCCGACAGGCTATCAGGAAACCAACTCATCCCATTCTCAGCAAAGTGGCAATGGCGCCGGCGTAGCATCTGGTAACTCTAGCCAGGTGCTAAACGGTGGTAGCAACAGCTCGACCGGTAACGGTTATATGTTGCTGCCACCAGTTGGCTCTTCAGCTACTCATATGTCTGGTAATATGGGTCGCAACGGAGCGGCAGGTGGAGCTGGTAATGTCGCCTCCACTGGCAATGTTGGTGTTGGGCATCATGGCGGAACAAGCGCAACCTCTGGTGGGGGTGAAGCCATCGACTTCAAGCACTTGTTCGAAGAGCTGTGTCCTGTCTGTGGGGATAAGGTGAGCGGCTATCATTACGGTTTGCTGACCTGTGAATCCTGCAAGGGATTTTTCAAGCGAACGGTTCAAAATAAAAAGGTCTACACATGCGTCGCGGAACGTTCCTGCCACATCGATAAAACACAACGAAAACGTTGTCCATACTGCCGATTCCAAAAGTGTCTCGAAGTTGGCATGAAACTCGAGGCGGTTCGAGCAGATCGTATGCGGGGTGGCCGGAACAAATTTGGACCCATGTATAAACGCGATCGAGCGCGCAAGCTTCAGGTGATGCGACAAAGGCAACTTGCTCTACAGGCACTGCAGAGTTCTATTGGTTCAGATATAAAGCCAACACCACTCTCGCCTAGCTATCAACAAGCATAtccaaatatgaatattaagcAAGAAATTCAAATACCTCAGGTATCCTCACTCACGCAATCGCCGGATTCATCACCCAGccccattgccattgctttGGGTCAAGTAAATACTGGCGGTAGCGCTGTGATAGCCCAGCCCCTGAATGTTGGCAATTTGAGTGGTGGCAGTTCGCTAGGCAATGGTAACAACAACAccaccaataacaacaacacaggAAGCAGTGTTGTCGGCGGCAGCAGTGGAGGTGGCAATAACGCTGGCGGCAGTGGTGGCTCGAACAACACAAGCAACATCCCTGATGCTCTGCAACGTAACGGAAACAgtggcaataacaacagcaacaacagctgcctTGAAACTGGAAATGGATCTTTGCAGAGCACAGCTGAAGCAAAATTATgcttTGATTCTGGCGCACATCCATCAAGTACAGTAGATTCAATAATTGAGCCTTTGAGAGTTTCGCCGATGATACGCGAATTTGTGCAATCAATCGATGATCGGGAATGGCAGACTCAGCTTTTTGCGCTGCTTCAAAAGCAAACGTATAACCAAGTTGAAGTTGATCTCTTTGAGTTGATGTGCAAAGTTTTGGATCAAAATCTATTCTCACAAGTGGATTGGGCAAGAAACACTGTATTTTTTAAGGATTTAAAGGTGGACGATCAGATGAAGCTACTTCAGCATTCTTGGTCAGACATGCTTGTGCTGGATCATCTGCATCATCGCATACACAACGGCTTGCCGGATGAGACGCAGCTGAATAACGGTCAGGTCTTCAACTTAATGAGCCTTGGCCTTTTGGGGGTTCCACAATTGGGTGACTACTTTAATGAATTGCAAAATAAGCTGCAGGACCTAAAGTTTGATATGGGAGACTATGTGTGCATGAAATTCCTCATACTTTTAAATCCAGATGTACGTGGAATAGTGAATAAAAAGACAGTTGTGGAGGGACACGAAAATGTTCAGGCAGCTCTGCTGGATTACACACTTACATGTTACCCCTCAGTAAATGACAAGTTTAGGAGGCTTCTGAACATACTACCGGAAATTCACGCTATGGCCGCGCGCGGCGAAGAACATCTATACTCAAAACATTGTGCCGGCAGTGCACCTACGCAGACGCTGCTCATGGAGATGTTACATGCTAAACGAAAGGTGTGA
- Protein Sequence
- MLLEMDPQQATVQFISSLNLSPFSMQLDQQPASPAQSNTNNNNSSSSGNNTNNNNNNNNNNNNNNNNNNNNNNNNSNNDNETNPLSNSDNDYNSYTLQLGNHQQHQPQQLHNTHNQQHQQHYQQQHQNIASNNANNAANQFNGSSYSYIYNFDSQYIFPTGYQETNSSHSQQSGNGAGVASGNSSQVLNGGSNSSTGNGYMLLPPVGSSATHMSGNMGRNGAAGGAGNVASTGNVGVGHHGGTSATSGGGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALQSSIGSDIKPTPLSPSYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNTGGSAVIAQPLNVGNLSGGSSLGNGNNNTTNNNNTGSSVVGGSSGGGNNAGGSGGSNNTSNIPDALQRNGNSGNNNSNNSCLETGNGSLQSTAEAKLCFDSGAHPSSTVDSIIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLMSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIVNKKTVVEGHENVQAALLDYTLTCYPSVNDKFRRLLNILPEIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00546709; iTF_00522204; iTF_00548836; iTF_00525160; iTF_00476655; iTF_00476678; iTF_00493682; iTF_00493703; iTF_00509846; iTF_00509867; iTF_00568282; iTF_00568306;
- 90% Identity
- iTF_00546709;
- 80% Identity
- iTF_00546709;