Dmer009800.1
Basic Information
- Insect
- Drosophila merina
- Gene Symbol
- sip1
- Assembly
- GCA_035047645.1
- Location
- JAWNPH010000055.1:11230028-11232679[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-94 7.8e-90 301.4 12.6 2 275 418 686 417 686 0.98 2 2 0.11 1.1e+03 -0.8 0.0 158 190 699 730 691 741 0.55
Sequence Information
- Coding Sequence
- ATGTCTGACAATGAGTATGAACGCTTCGAAATCACGGACTACGACCTGGACAATGAGTTCAACATGAACAGGCCCCGCGGGCGTCACAGCAAGCACCAGCAGATCTACGGCATTTGGGCTGATGACAGCGAGGAGGAGAGCGGCGGAGAGGGAAGACTGCGCAGGGGACGGTCCACCCGGCAGCCCAAGGACTACACCCTGCCCGTGAACTTCGTAGCCGGCGGCATACAGCAGGCGGgcaagaaaaagaagaaaagcaTCAAAGGTGATGACCAAAAGGGAGCCATAAAGGACGGTGACGAAGCGGAGGAACAGGAAGGAAGCGATGACTCCGCCGGAAGCACTCGACCCGCCTTCGGACGACGGAGCGATGCCGACAGCTCAGACAGCTCTGCAGAAGAGGCGCGGCCCTCCCTGGGCAAGGCACCGGAGAAGTCCACCTTCCAACATCGCTCCCACATTGCCAGCGATCGAAACGTTGGCGCCTGGGAGCAGCACACGCGAGGAATAGGCGCCAAGCTCCTTCTCCAGATGGGCTATGAGCCCGGCAAGGGTCTGGGCAAGGACTTGCAGGGTATTTCCCAACCTGTTCAGGCCCATGTGCGCAAAGGTAGAGGCGCCATCGGGGCATATGGTCCCGAAACAGCAGCCAGCATTGGTGGAAAGAATGCCAGAGCCATCAAGGTGGACGAGGATGTGCGGGAGGCCAAGGAGTTCAAGGAACAGCTCAACAAATGGCGCAAGGGAGGCGCTGCCGCAGATTCCCAGGAGCGCCAGGGCAAACGTTACTATTACAAATCGGTGGAAGAGGTTATAGCCAAGGGAAACAAGTCCAGTCACTTGCTCTCCGAGAAGCTGAGCAAGAAACTGGGCAACGTCCCGGTAATTGACATGACGGGACCAGAAAAACGGGTGCTCAGTGGGTACCATGCGCTGGGCCAAGCGAAAATCACTCCAGAGGAGACACTCTTCGACGCCGAGGCATCAGACAAGGGAGCCGGACCGGCCCCTGCTTCAGTGTTCTCCATGCCCGAACTGACGCACAATCTGCAGCTGTTGGTCAGCCAGTCGGAGCAGGAAATCATTGCCATTGACAAACAGGAACGAGAGTGCTCCAATCAGCAAGTGGCCCTGGAAAGCGAGCACCGCAGACTCGAGGAAATAGTCCAGCTGGAGCGTAACCATATCCGAACACTCGAAGAGGTACTGGAGCGCGTGGAACGGCTCAACGATGACCCGGAAATCGGTTTGGCGCAAGCGGAGCGACTGTTCCGGGAACTGCTCGAACAATATGCAGCCGAATTCCAAGAATTTGGCCTGGCGGACTTGGCGGCAGGAGTCATTGCACCGCTCCTGAAGAGAGACTTAGCCCAGTGGCAGCCACTGGAGCAGCCAACAGAGCCCATCCACCTGGTAAAGAAGTGGCGGGCAATGCTACAGAACGGCAATTCTGCGGAAAATCAGTTGAGGAACGTCTTTGATCCCTACTCTTCGCTGATCTGGGCAGGAGTTATGCCTTCGTTTCGTGCCTGCGCAGCGGCCTGGCAACCCAAAGAGCACTCGCCCATGGCAGCTCTTCTCGATGCTTGGGCTCCTTTGCTGCCTGCTTGGGTGCTTGACTCTATGCTGGAACAGCTGGTGCTGCCGCGATTGGTTGTCGGGGTCCAGGGATGGGATCCCCTTACCGACACCGTGCCAATCGACAGCTGGGTTCTGCCTTGGTCCTATATTCTGGGCGATAAGCTGGAAGAGGCAGTCTATCCGCAGATCCGCAGCAAGCTCGGCGAGGCTTTGCGCGCTTGGTCGCCACAGGATCGTTCGGCAAGAGCCATGCTGACGCCCTGGCAAAATGCTTTTCCTCCGGAAGAGATGCAGGAGTTCCTTCAGCGGCACATTGTGCCCAAACTACAGGTTGTTCTAGGTGAATTCTCAATTAATCCAGTGCACCAGGATCTGGAGCTGTGGAATCAAGTGTGGGAGTGGCACGAGCTCATCGATCCCATGTACATGGCTCTGCTACTAGACAAGCACTTCTTCCCGCGCTGGATGCAGGTTTTGGTGCTGTGGCTGAACCAGTCGCCCGACTATGCGGAAATATCGCGCTGGTACACAGGCTGGAAGAGCATGTTCTCCGAAGCGGTGCTGCGGGAACCAAGTGTAAAGGAGCACCTCCGGCGAGCACTGGACATGATGCACCGTGCCAGCGACGCTCTATTGCAGCCCACGGCTACACCTCCGCCTCCAGTTCCACCAGCTGCCGTCCCTGTAGGCCTGTTGCCTCCTGTTATGATGCTGGATATGATTCACCAACCCGCCCAGCTGGAGTTCAAGGAGCTCGTGTCGCAGCGATGCGCCGAGCTGGGCATTATCTTTGCCCCATTGCCCGGGAGAAGAGAGTTGGGAAAGCAGATCTACCGAGTCGGCAAGCTCTTTTGCTACATCGACAGAAATGTTTGTATGCTCAGCGATGCCAGCTTCACCAACTGGCAGCCTGTGGGTCTCAACCAACTGCTGGAACGATCACAAACTGGCattgtttaa
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNMNRPRGRHSKHQQIYGIWADDSEEESGGEGRLRRGRSTRQPKDYTLPVNFVAGGIQQAGKKKKKSIKGDDQKGAIKDGDEAEEQEGSDDSAGSTRPAFGRRSDADSSDSSAEEARPSLGKAPEKSTFQHRSHIASDRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKNARAIKVDEDVREAKEFKEQLNKWRKGGAAADSQERQGKRYYYKSVEEVIAKGNKSSHLLSEKLSKKLGNVPVIDMTGPEKRVLSGYHALGQAKITPEETLFDAEASDKGAGPAPASVFSMPELTHNLQLLVSQSEQEIIAIDKQERECSNQQVALESEHRRLEEIVQLERNHIRTLEEVLERVERLNDDPEIGLAQAERLFRELLEQYAAEFQEFGLADLAAGVIAPLLKRDLAQWQPLEQPTEPIHLVKKWRAMLQNGNSAENQLRNVFDPYSSLIWAGVMPSFRACAAAWQPKEHSPMAALLDAWAPLLPAWVLDSMLEQLVLPRLVVGVQGWDPLTDTVPIDSWVLPWSYILGDKLEEAVYPQIRSKLGEALRAWSPQDRSARAMLTPWQNAFPPEEMQEFLQRHIVPKLQVVLGEFSINPVHQDLELWNQVWEWHELIDPMYMALLLDKHFFPRWMQVLVLWLNQSPDYAEISRWYTGWKSMFSEAVLREPSVKEHLRRALDMMHRASDALLQPTATPPPPVPPAAVPVGLLPPVMMLDMIHQPAQLEFKELVSQRCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDASFTNWQPVGLNQLLERSQTGIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00609159;
- 90% Identity
- iTF_00550242; iTF_00477327; iTF_00475920; iTF_00481531; iTF_00615551; iTF_00503980; iTF_00614895;
- 80% Identity
- -