Basic Information

Insect: Drosophila meridionalis
Gene Symbol: stc
Assembly: GCA_035045145.1
Location: JAWNPG010000031.1:1682392-1685807[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.4 1.4e+04 -3.7 0.5 15 18 362 365 361 366 0.79

2 15 2 1.9e+04 -4.1 1.6 15 19 389 393 388 393 0.81

3 15 0.056 5.4e+02 0.8 2.0 4 11 422 429 421 430 0.90

4 15 5.9e-07 0.0056 16.8 15.1 1 19 434 451 434 451 0.93

5 15 1.7 1.6e+04 -3.9 0.9 6 10 477 481 476 481 0.88

6 15 2.2e-08 0.00021 21.3 13.6 1 18 487 504 487 505 0.98

7 15 2 1.9e+04 -6.2 4.1 7 13 509 515 509 516 0.77

8 15 2e-09 1.9e-05 24.6 12.9 1 19 545 563 545 563 0.98

9 15 5.8e-05 0.55 10.4 18.4 4 19 611 626 604 626 0.88

10 15 0.062 5.9e+02 0.7 11.7 1 11 666 676 666 688 0.79

11 15 2.8e-10 2.7e-06 27.4 15.1 1 18 693 710 693 711 0.97

12 15 2 1.9e+04 -4.4 1.2 6 10 740 744 740 744 0.88

13 15 2 1.9e+04 -7.1 9.2 10 18 758 767 748 768 0.77

14 15 9.8e-08 0.00093 19.2 14.7 1 16 804 819 804 829 0.93

15 15 2.6e-07 0.0025 17.9 13.3 1 19 836 855 836 855 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.4	1.4e+04	-3.7	0.5	15	18	362	365	361	366	0.79
2	15	2	1.9e+04	-4.1	1.6	15	19	389	393	388	393	0.81
3	15	0.056	5.4e+02	0.8	2.0	4	11	422	429	421	430	0.90
4	15	5.9e-07	0.0056	16.8	15.1	1	19	434	451	434	451	0.93
5	15	1.7	1.6e+04	-3.9	0.9	6	10	477	481	476	481	0.88
6	15	2.2e-08	0.00021	21.3	13.6	1	18	487	504	487	505	0.98
7	15	2	1.9e+04	-6.2	4.1	7	13	509	515	509	516	0.77
8	15	2e-09	1.9e-05	24.6	12.9	1	19	545	563	545	563	0.98
9	15	5.8e-05	0.55	10.4	18.4	4	19	611	626	604	626	0.88
10	15	0.062	5.9e+02	0.7	11.7	1	11	666	676	666	688	0.79
11	15	2.8e-10	2.7e-06	27.4	15.1	1	18	693	710	693	711	0.97
12	15	2	1.9e+04	-4.4	1.2	6	10	740	744	740	744	0.88
13	15	2	1.9e+04	-7.1	9.2	10	18	758	767	748	768	0.77
14	15	9.8e-08	0.00093	19.2	14.7	1	16	804	819	804	829	0.93
15	15	2.6e-07	0.0025	17.9	13.3	1	19	836	855	836	855	0.96

Sequence Information

Coding Sequence: ATGGCCGAGTattggcagccgcagcagcagcagtcgcagcagcagcaacagcagcacccgcagcagcaccagcagcagcagcaacaacagcaacagctaacaAATGGAGCCGGAGATTCAGCATGCTCAAACACTGCGAATGGCCacgctaataataataattatgtaaattttaatcaatttatcaGTCAACACAATTTGGCCAGCTCCGCTTACAAcgttggcgtcggcgtcggcggcggtggcggcgccTTTGGCCtgacgcccagcagcagcagcgccagcagcggctCCAATTTATATGCGCCACACTTTTATGGCAATCAAAATGGCGACTGTTACAATGCGGCTGGCGGAGCTGTTGCCTACTCCGTTGCCTATCCAAGTCCTTACACATCCTTTGGCCCAAATCCGTTTGCTGCCGCCTCGGCTGGCTACGACTTCAGCGCTTCCAAGCTGCAGGCAACAGCGCCCGAGTTCGTGCCCAACTTCGCTAAGCTGAGTTTAACAGAGAATGCCGCTGTTAagaatcacaacaacaacagtaacagtaacagcaacagcaacaacaacactgcCACACAGCCAAatggagcagcggcagcggcagcggcgtcgACTGGCAGCGCAGCACCGCAGCCGCAGCGCGCGGAGCAGCGACAATCGAAGTCtcagggcagcagcagcagcaacaacagtcgcCAGCAGCGACGCAACGACTACCGCGAGGAGCGCAACGAAGAGCGCTATGAACGCGGTAAGAAAccgcagaagcagcagcgtTACGATAATCATCGCAGCAACAAGCGACGTGATGATTGGAATCGCAATCGGGATCGCATCAATGGCTATCCGCGCGCTGCCGAGGAGCTggacaccagcaacagcaacgacagcgCGCAGACCTCGCccgagaagcagcagcaccagtaccagcatcagcagcagcagatctcGCCCAGACGCGCACCTGACCTGGAGAAGCTGTCACAGCGGGAGAAGCTGATGCGAGACATTGAGCAGAGGCGACTCGAGTGCTTGGTCTGCGTGGAGCTGATCAAGGCGCACCATGGCACCTGGTCGTGCCAGAACTGCTACCACGTGCTGCACCTGAAGTGCACCATCACATGGGCGAGCAGCTCGAAGTCGAGCGAGGGCTGGCGCTGTCCCGCCTGCCAGAACGTGCTGCAGGAGCTGCCGCGGGAGTACCTCTGCTTCTGCGGCAAGTTGAAGAATCCGCCCCTGACGCGCAACGAGCTGGCCCACAGCTGCGGCGAGCTCTGCTGCCGCGTCGAGGGCTGCAGCCATGCGTGCACCCTGCTCTGCCACCCAGGACCGTGCCCGCCCTGCCAGGCGAACGTGAAtcgcagctgcggctgcggaCGCACCTCCAAGCTGATGCAGTGCGCCATGAAGCAGCCACTCCAGTGCGAGGCCATCTGCGACAAGCTCTTGAATTGCGGCGAGCATCGCTGCCAGCAGCCCTGCCACGCGGGCAAGTGTGAGGCGTGCGCGGAGCAGGTACAGCAGCACTGTCACTGCGGCAAGCAGCAGCGCGAGGTGTTGTGCACAAGGGAGAGCCAGGACAAGCGCAGCTACTCCTGCAAGGAGTGCTGCGGCAAGCCGCTGCCCTGCGGCAACCACAAGTGCAAGGATTCGTGTCATGCCGGCGCCTGCCGCCCCTGCAAGCTGAGTCCCACCCAGATCACCAGCTGCCCCTGCGGCAAGCTGCCCGTGCCGGCGACACAGCGGAGCAGCTGCCTCGATCCGGTGCCCACGTGCGAGGGCATCTGCAGCAAGACGCTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCCCAAGCAAGTGCCACCTGGGCCAGTGCCCGCCCTGCCCGAAGCAAACGGCTGTGAAGTGCCGCTGCGGCCACATGGACCAGATGATCAAGTGCCGGCAGCTGTCGACGCGGGCGGACGACGCGCGCTGCAAGCGCCGCTGTACTAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATCGATCACGCATGCCCGTTGCCCTGCAACCGGACGTTGAGTTGCGGGCGGCATAAGTGCGACCAGCCCTGCCATAGGGGCAACTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTATACTGTGAGTGTGGTGCGGAAGTCATCTATCCACCCGTGCCCTGTGGCACCAAGAAGCCCGTCTGCAAGCGTCCCTGCTCCCGCACCCACGGCTGCGAGCACGCGCCCCAGCACAACTGCCATGCGGCGGCCACGTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAGCCACGAGCAGCGCAAGACGATACCTTGCTCCCAGGCCAGCTTCAGCTGCGGCTTGGCCTGCGGCAAGCCGCTCTCCTGCGGCCGGCACAAGTGCATCCGGCCCTGTCACGAGGGCGACTGCCAGCAGCCAGGCGAGCTGTGCCGCCAGAGCTGCACCAAGCCGCGCCCGCTATGCGGCCACAAGTGCGCCGCCGCCTGCCACGAGGGCGACTGCCCGGAGACGCCCTGCAAGGAGCTCGTTGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAACCGCAGCTGCCAGGAGTTGGCGCGCGAGCACAGTCGCATTGCCACCGCCCAGCTGGCGTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGTTGAGCGAGATCCTGGCGcccaataaaaacaacaagtcCAACAAAACCCTGGACTGCAATGAGGAGTGTCGTCTGCTGGAGCGCAATCGCCGCTTGGCCATTGGCCTTCAGTCGCGCAATCCAGAGGCACAGCTCAAGTCGCTGACCAAGTACTCGGAGTTCCTGCGTGGGTTTGCCAAGCGCAATCCGGCGCTCACCAAGAGCGTCTACGAAACGCTCAGCGATCTGGTCAAGCTTGCCAAGGAGAGCAAGCAGAAGTCCAGGAGTCACTCGTTTCCCACCATGAATCGCGAAAAGCGTCAGCTGGTGCACGAGCTGTGCGAGGTTTTTGGCGTGGAGTCCGTGTCCTACGACAAGGAGCCCAATCGCAATGTCGTTGCGACGGCGCACAAGGAGCGCTGCTGGCTGCCGGCCACGAGCATCATGGAGGTGCTGGCGCGTGAATCCGGCCAACGGCGCGTTCCGGTGCCCAGCAACAATGCGTGGAGCCTCAAGAAGTAG
Protein Sequence: MAEYWQPQQQQSQQQQQQHPQQHQQQQQQQQQLTNGAGDSACSNTANGHANNNNYVNFNQFISQHNLASSAYNVGVGVGGGGGAFGLTPSSSSASSGSNLYAPHFYGNQNGDCYNAAGGAVAYSVAYPSPYTSFGPNPFAAASAGYDFSASKLQATAPEFVPNFAKLSLTENAAVKNHNNNSNSNSNSNNNTATQPNGAAAAAAASTGSAAPQPQRAEQRQSKSQGSSSSNNSRQQRRNDYREERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQTSPEKQQHQYQHQQQQISPRRAPDLEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSSEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVNRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQHCHCGKQQREVLCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPATQRSSCLDPVPTCEGICSKTLRCGKPAHPHQCPSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHAPQHNCHAAATCPPCMMFTTKWCHGSHEQRKTIPCSQASFSCGLACGKPLSCGRHKCIRPCHEGDCQQPGELCRQSCTKPRPLCGHKCAAACHEGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPEAQLKSLTKYSEFLRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00549946;
80% Identity: -