Dmer003179.1
Basic Information
- Insect
- Drosophila meridionalis
- Gene Symbol
- dsx
- Assembly
- GCA_035045145.1
- Location
- JAWNPG010000020.1:1388853-1389905[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-24 6e-21 74.2 10.4 2 47 41 86 40 86 0.97 2 3 5 1.9e+04 -18.3 16.5 10 20 129 139 122 142 0.57 3 3 2.7 1e+04 -3.4 1.0 12 22 181 191 178 194 0.77
Sequence Information
- Coding Sequence
- ATGGTTTCTGAGGAGAACTGGAACAGCGACACCATGTCCGACTCGGACATGATCGACTCGAAGAACGATGTGTGCGGCGGCGCCTCCAGCTCCAGCGGCAGCTCCATATCCCCACGCACGCCGCCCAACTGTGCGCGCTGTCGCAACCACGGCTTGAAGATCACCCTGAAGGGTCACAAGCGGTACTGCAAGTACCGCTACTGCACCTGCGAGAAGTGCCGCCTCACGGCGGACAGGCAGCGCGTGATGGCGCTGCAGACGGCGCTGCGTCGCGCCCAGGCGCAGGACGAGCAGCGCTCGCTTCACATGCACGAGGTGCCGCCGCCAGCGGGCGCGACAACGGCGCTGCTCAGCCACCATGGACACCATCATCACGTGCATGCCGCCcacggccacgcccatgcGCATCACGGCCATGGCCACCACGGCCACGTGCTGCACCACcagcaggcggcagcagcagcggccgcagcagcagcggctgcagcaggaACCGCACCGCCGCCTCAGCCCCAGTCGCACCTGAGCAATGCCCACAACGGCACTGCGAGCACTCTGcatggccacgcccatgcccacTCGCATGTGCATCACGGCCACATGGCGGCCGCCTCATCggtggtgcagcagcagcaacagcagcagcaccaccaccaccaacagcaccaccagcaacagcaacatcagcagcagcagccgccccATCAGGCAGCTCTTCGATCTCCCTCGCACAGCGATCACGGCGGCAGCGTCGGCCCAGCCACGAGCAGCTCCggcggcggaggcggcggTGGCCCCAGCTCCAGCAATGTGGCCGCTGCCTCGAGCAGCGGCTCCGGCAGCGCAGCTGGCGCTGGCAACAGCGCCGGCATCAGCGTCATCACCAGCGCCGATCATCACATGTCCACGGTGCCAACGCCCGCTCAATCGCTGGAGGGCTCCTGCGACTCctcatcgccatcgccatcgtccACATCGGGCAATGCCGTGCTGCCCATCTCCGTGTCCAGCTCGCGCAAGAATGTGCCACTCGGTAAGTGCCCCGGCAACTGA
- Protein Sequence
- MVSEENWNSDTMSDSDMIDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKYRYCTCEKCRLTADRQRVMALQTALRRAQAQDEQRSLHMHEVPPPAGATTALLSHHGHHHHVHAAHGHAHAHHGHGHHGHVLHHQQAAAAAAAAAAAAAGTAPPPQPQSHLSNAHNGTASTLHGHAHAHSHVHHGHMAAASSVVQQQQQQQHHHHQQHHQQQQHQQQQPPHQAALRSPSHSDHGGSVGPATSSSGGGGGGGPSSSNVAAASSSGSGSAAGAGNSAGISVITSADHHMSTVPTPAQSLEGSCDSSSPSPSSTSGNAVLPISVSSSRKNVPLGKCPGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00572615;
- 90% Identity
- iTF_00573334;
- 80% Identity
- -