Dmer006217.1
Basic Information
- Insect
- Drosophila meridionalis
- Gene Symbol
- kn
- Assembly
- GCA_035045145.1
- Location
- JAWNPG010000025.1:980154-983128[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-117 1.8e-113 379.9 0.0 205 384 1 209 1 213 0.99 2 2 1.5e-06 0.0056 15.1 15.1 424 518 216 309 209 331 0.58
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGGTTGTAATCGCCACCCAAGTGGCCGTCGACAGAGAACTGCTGGCCATCTCGGACAATATGTTCGTGCACAATAACTCGAAGCACGGACGCCGCGCCAAGCGACTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTATCCACCTTTGCCCGTGGCACAGCCCTGCATCAAGGCGATATCGCCCAGCGAGGGCTGGACCACAGGTGGCGCCACAGTCATCATTGTGGGCGACAATTTCTTTGACGGACTGCAAGTGGTCTTCGGCACAATGCTGGTCTGGAGCGAGCTGATCACGTCGCACGCGATAAGGGTGCAGACACCACCGCGACACATACCCGGCGTAGTCGAGGTGACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGATCACCCGGACGCTTCGTCTATGTCTCAGCTCTCAATGAACCCACAATCGACTACGGCTTCCAGCGACTGCAGAAGCTCATACCCCGGCATCCTGGGGACCCGGAGAAGCTGCAGAAGGAAATCATACTAAAACGCGCCGCAGATCTCGTCGAAGCACTCTACTCCATGCCCAGCAGATCGCCCGGTGGCTCCACCAGCTTCAACTCATACGCTGGCCAGCTGGCGGTAAGCGTGCAGGATGGCAGTGGGCAGTGGACCGAGGATGACTATCAGCGCGCCCAATCGAGCAGCGTCAGTCCTCGCGGCGGCTACTGCAGCAGCGCCTCAACACCACACAGCTCGGGCGGTTCATATGGCGCCACCGCAACCACCGCTGCCGTTGCAGCCACTGCGAACGGCTATGCGCCCGCACCGAATATGGGTACACTTTCCTCGTCGCCGGGCAGCGTCTTTAACTCAACATCAATGTCCGTGTCGACGCCTTGGCATTCGGCTCTTGTGCAACACCATCATGCCACCGCCGCTGTCGCCCACCCGCATCActatccgcatccgcatcagcCGTGGCACAATCCCGCCGTgacagcagcgactgcggccGTTTAA
- Protein Sequence
- MRRFQVVIATQVAVDRELLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVAQPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHATAAVAHPHHYPHPHQPWHNPAVTAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00532156;
- 90% Identity
- iTF_01549315;
- 80% Identity
- iTF_00544957; iTF_00544256;