Basic Information

Gene Symbol
kn_2
Assembly
GCA_035045365.1
Location
JAWNPC010000110.1:655944-659445[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-117 3.1e-114 382.6 0.0 205 384 1 209 1 213 0.99
2 2 2.9e-09 8.6e-06 24.5 12.3 424 563 216 358 209 373 0.71

Sequence Information

Coding Sequence
ATGAGAAGATTTCAGGTTGTAATCGCCACCCAAGTGGCCGTTGATAGAGAACTGCTGGCCATCTCGGACAATATGTTCGTGCACAATAACTCGAAGCACGGACGCCGCGCCAAGCGACTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTATCCACCTTTGCCCGTGGCCACGCCCTGCATCAAGGCGATATCACCCAGCGAGGGCTGGACCACAGGTGGCGCCACAGTCATCATTGTGGGCGACAATTTCTTTGACGGACTGCAAGTGGTCTTCGGCACAATGCTGGTCTGGAGCGAGCTGATCACGTCACATGCGATAAGGGTGCAGACACCACCGCGACACATACCCGGCGTGGTCGAGGTGACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAAGGCTCACCCGGACGCTTCGTCTATGTCTCAGCTCTCAATGAACCTACAATCGACTACGGCTTCCAGCGACTACAGAAGCTCATACCCAGGCATCCCGGCGATCCGGAGAAGCTGCAGAAGGAAATCATACTTAAACGCGCCGCCGATCTCGTCGAGGCACTCTACTCCATGCCCAGCAGATCGCCCGGTGGCTCCACCAGCTTTAACTCATACGCTGGCCAGCTGGCGGTGAGCGTGCAGGATGGCAGCGGCCAGTGGACCGAGGATGACTATCAGCGCGCCCAATCGAGCAGCGTCAGTCCACGCGGCGGCTACTGCAGCAGCGCCTCAACACCACACAGCTCGGGTGGTTCGTATGGCGCCACAGCAACCACCGCTTCCGTTGCAGCCAGTGCGAATGGCTATGCGCCCGCTCCGAACATGGGTACACTCTCCTCATCGCCAGGCAGTGTCTTCAACTCAACTTCAACCCTAACCACCCACAAAGTGAATCAAAATTTGCTCAGCAAGTGCATTTTCGACATTAATCCACCAACAGTGTCGACACCTTGGCATTCGGCTCTTGTGCAACACCATCATGCCACCGCCGCTGTCGCCCACCCGCATCActatccgcatccgcatcagcCGTGGCACAATCCCGCCGTGtcagcagcgactgcgacggccGTTTAA
Protein Sequence
MRRFQVVIATQVAVDRELLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTASVAASANGYAPAPNMGTLSSSPGSVFNSTSTLTTHKVNQNLLSKCIFDINPPTVSTPWHSALVQHHHATAAVAHPHHYPHPHQPWHNPAVSAATATAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01549315;
80% Identity
-