Dmer006330.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- stc
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000066.1:1652348-1655745[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.4e+04 -3.6 0.5 15 18 356 359 355 360 0.79 2 15 2 2e+04 -4.1 1.6 15 19 383 387 382 387 0.81 3 15 0.056 5.7e+02 0.8 2.0 4 11 416 423 415 424 0.90 4 15 5.8e-07 0.0059 16.8 15.1 1 19 428 445 428 445 0.93 5 15 1.7 1.7e+04 -3.9 0.9 6 10 471 475 470 475 0.88 6 15 2.2e-08 0.00022 21.3 13.6 1 18 481 498 481 499 0.98 7 15 2 2e+04 -6.2 4.1 7 13 503 509 503 510 0.77 8 15 2e-09 2e-05 24.7 12.9 1 19 539 557 539 557 0.98 9 15 5.8e-05 0.58 10.4 18.4 4 19 605 620 598 620 0.88 10 15 0.065 6.6e+02 0.6 11.7 1 11 660 670 660 682 0.79 11 15 2.8e-10 2.8e-06 27.4 15.1 1 18 687 704 687 705 0.97 12 15 2 2e+04 -4.4 1.2 6 10 734 738 734 738 0.88 13 15 2 2e+04 -7.1 9.2 10 18 752 761 742 762 0.77 14 15 9.7e-08 0.00098 19.3 14.7 1 16 798 813 798 823 0.93 15 15 2.6e-07 0.0026 17.9 13.3 1 19 830 849 830 849 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAGTAttggcagccgcagcagcagcagtcgcagcagcagcaacagcagcacccgcagcagcagcaacaacagcaacagctaacaAATGGAGCCGGAGATTCAGCATGCTCGAACACTGCGAATGGCCacgctaataataataattatgtaaattttaatcaatttatcaGTCAACACAATTTGGCCAGCTCCGCTTACAACgttggcgtcggcgtcggcggcggtggcggcgccTTTGGCCTgacgcccagcagcagcagcgccagcagcggcTCCAATTTATATGCGCCACACTTTTATGGCAATCAAAATGGCGACTGTTACAATGCGGCTGGCGGAGCTGTTGCCTACTCCGTTGCCTATCCAAGTCCTTACACATCCTTTGGCCCCAATCCGTTTGCTGCCGCCTCGGCTGGCTACGACTTCAGCGCTTCCAAGCTGCAGGCAACAGCGCCCGAGTTCGTGCCCAACTTCGCTAAGCTGAGTTTAACAGAGAATGCCGCTGTTAAGAATcacaataacaacagtaacagtaacagcaacagcaacaacaacactgcCACACAGCCAAatggagcagcggcagcggcgtcgACTGGCAGCGCAGCACCGCAGCCGCAGCGCGCGGAGCAGCGACAATCGAAGTCtcagggcagcagcagcagcaacaacagtcgcCAACAGCGACGCAACGACTACCGCGAGGAGCGCAACGAAGAGCGCTATGAACGCGGTAAGAAAccgcagaagcagcagcgtTACGATAATCATCGCAGCAACAAGCGACGCGATGATTGGAATCGCAATCGGGATCGCATCAATGGCTATCCGCGCGCCGCCGAGGAGCTggacaccagcaacagcaacgacagcgCGCAGACCTCGcccgagaagcagcagcaccagtaccagcatcagcagcagcagatctcGCCCAGACGCGCACCTGACCTGGAGAAGCTGTCACAGCGGGAGAAGCTGATGCGAGACATTGAGCAGAGGCGACTCGAGTGCTTGGTCTGCGTGGAGCTGATCAAGGCGCACCATGGCACCTGGTCGTGCCAGAACTGCTACCACGTGCTGCACCTGAAGTGCACCATCACATGGGCGAGCAGCTCGAAGTCGAGCGAGGGCTGGCGCTGTCCCGCCTGCCAGAACGTGCTGCAGGAGCTGCCGCGGGAGTACCTCTGCTTCTGCGGCAAGTTGAAGAATCCGCCCCTGACGCGCAACGAGCTGGCCCACAGCTGCGGCGAGCTCTGCTGCCGCGTCGAGGGCTGCAGCCATGCGTGCACCCTGCTCTGCCACCCAGGACCGTGCCCGCCCTGCCAGGCGAACGTGAAtcgcagctgcggctgcggacGCACCTCCAAGCTGATGCAGTGCGCCATGAAGCAGCCACTCCAGTGCGAGGCCATCTGCGACAAGCTCTTGAATTGCGGCGAGCATCGTTGCCAGCAGCCCTGCCACGCGGGCAAGTGTGAGGCGTGCGCGGAGCAGGTACAGCAGCACTGCCACTGCGGCAAGCAGCAGCGCGAGGTGTTGTGCACAAGGGAGAGCCAGGACAAGCGCAGCTACTCCTGCAAGGAGTGCTGCGGCAAGCCGCTGCCCTGCGGCAACCACAAGTGCAAGGATTCGTGTCATGCCGGCGCCTGCCGCCCCTGCAAGCTGAGTCCCACCCAGATCACCAGCTGCCCCTGCGGCAAGCTGCCCGTGCCGGCGACACAGCGGAGCAGCTGCCTCGATCCGGTGCCCACGTGCGAGGGCATCTGCAGCAAGACGCTGCGCTGCGGCAAGCCGGCGCATCCGCATCAGTGCCCAAGCAAGTGCCACCTGGGCCAGTGCCCGCCCTGCCCGAAGCAAACGGCTGTGAAGTGCCGCTGCGGCCACATGGACCAGATGATCAAGTGCCGGCAGCTGTCGACGCGGGCGGACGACGCGCGCTGCAAGCGCCGCTGTACCAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATCGATCACGCATGCCCGTTGCCTTGCAACCGGACGTTGAGTTGCGGGCGGCATAAGTGCGACCAGCCCTGCCATAGGGGCAACTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTATACTGTGAGTGTGGTGCGGAAGTCATCTATCCACCCGTGCCCTGTGGCACCAAGAAGCCCGTCTGCAAGCGTCCCTGCTCCCGCACCCACGGCTGCGAGCACGCGCCCCAGCACAACTGCCATGCGGCGGCCACGTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAGCCACGAGCAGCGCAAGACGATACCCTGCTCCCAGGCCAGCTTCAGCTGCGGCTTGGCCTGCGGCAAGCCGCTCTCCTGCGGCCGGCACAAGTGCATCCGGCCCTGTCACGAGGGCGACTGCCAGCAGCCAGGCGAGCTGTGCCGCCAGAGCTGCACCAAGCCGCGCCCGCTATGCGGCCACAAGTGCGCCGCCGCCTGCCACGAGGGCGACTGCCCGGAGACGCCCTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAACCGCAGCTGCCAGGAGTTGGCGCGCGAGCACAGTCGCATTGCCACCGCCCAGCTGGCGTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGTTGAGCGAGATCCTGGCGcccaataaaaacaacaagtcCAACAAAACCCTGGACTGCAATGAGGAGTGTCGTCTGCTGGAGCGCAATCGCCGCTTGGCCATTGGCCTGCAGTCGCGCAATCCGGAGGCACAGCTCAAGTCGCTGACCAAGTACTCGGAGTTCCTGCGTGGCTTTGCCAAGCGCAATCCGGCGCTCACCAAGAGCGTCTACGAAACGCTTAGCGATCTGGTCAAGCTTGCCAAGGAGAGCAAGCAGAAGTCCAGGAGTCACTCGTTTCCCACCATGAATCGCGAGAAGCGTCAGCTGGTGCACGAGCTGTGCGAGGTTTTTGGCGTGGAGTCCGTGTCCTACGACAAGGAGCCCAATCGCAATGTCGTTGCGACGGCGCACAAGGAGCGCTGCTGGCTGCCGGCCACGAGCATCATGGAGGTGCTGGCGCGTGAATCCGGCCAACGGCGCGTTCCGGTGCCCAGCAACAATGCGTGGAGCCTCAAGAAGTAG
- Protein Sequence
- MAEYWQPQQQQSQQQQQQHPQQQQQQQQLTNGAGDSACSNTANGHANNNNYVNFNQFISQHNLASSAYNVGVGVGGGGGAFGLTPSSSSASSGSNLYAPHFYGNQNGDCYNAAGGAVAYSVAYPSPYTSFGPNPFAAASAGYDFSASKLQATAPEFVPNFAKLSLTENAAVKNHNNNSNSNSNSNNNTATQPNGAAAAASTGSAAPQPQRAEQRQSKSQGSSSSNNSRQQRRNDYREERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQTSPEKQQHQYQHQQQQISPRRAPDLEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSSEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVNRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQHCHCGKQQREVLCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPATQRSSCLDPVPTCEGICSKTLRCGKPAHPHQCPSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHAPQHNCHAAATCPPCMMFTTKWCHGSHEQRKTIPCSQASFSCGLACGKPLSCGRHKCIRPCHEGDCQQPGELCRQSCTKPRPLCGHKCAAACHEGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPEAQLKSLTKYSEFLRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- iTF_00549946;
- 80% Identity
- -