Dmer002800.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- dmd-4
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000055.1:6668831-6673146[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-25 7.3e-22 77.2 8.9 1 47 34 80 34 80 0.98 2 2 0.31 1.2e+03 -0.4 0.2 23 32 298 307 290 310 0.81
Sequence Information
- Coding Sequence
- ATGTCCGACGATAATCCAGTTCATGCGAAACGGCCGCGACTCGCCGTCAACTCCAAGCTGACGAAACTCGCTGAGACGCCGCTGCCCAAAGCCTCGAACCGCGTGCCCAAGTGCGCCCGCTGCCGCAATCACGGCATCATCTCCGAGCTGCGCGGCCACAAGAAGCTCTGCACCTACAAGAGCTGCAAGTGTGCCAAGTGCGTCCTGATCTTTGAGCGACAGCGCATCATGGCCGCACAGGTTGCCCTCAAGCGCCAGCAGGCGGTGGAGGATGCGATTGCCCTGCGCCTGGTGGCAAATAAGACGGGACGCCAAATCGAGGCATTGCCGCCGGGCAGCATCTTCGGCTTGACCGTCACGCAGCCCAAGGaccagccacagcaacagcagcagcagcagctggagctggagcaggagcgggagcagcagcaggaacaggccaaagagcagcagcagcagcaggaatcCCAAACAGAATCCTTGGCTGTTGCCGAGGATCTGAGTGCGACGCGTCGCGATTTTGTCTCCCAAAGCGCGATCGATATGCTGGCCCAGCTCTTTCCGCAGCGCAAGCGATCCGTGCTGGAGCTGGTGCTCAAGCGCTGCGACTTGGACTTGATTCGCGCCATCGAGAACGTCTCCGAAGTGTCTGCCCAGCCGCCGCCGGCGGAGCAGGCGACCGTTGagctgctgccacagctgccgccgcagccgcTTCAATCCCTGCAGCTGGCGATGCCGCCACGGAGCAGCGCTTTTCGTCCAGTCATAGCCGAACAGTATACATCGAAGGCTTCGTCGACGGCAGCCGCCGCCATTTGCGCCTATCCCAAGTGGTTTGTGCCGCTCTCCTTTCCCGTTACCATGGGCCACTTGTCGAACTTGGCGCCGCGCTGTAATCTGCCCAACTGCAGCTGCCTGGACAGCTATCAATTCcactaa
- Protein Sequence
- MSDDNPVHAKRPRLAVNSKLTKLAETPLPKASNRVPKCARCRNHGIISELRGHKKLCTYKSCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVANKTGRQIEALPPGSIFGLTVTQPKDQPQQQQQQQLELEQEREQQQEQAKEQQQQQESQTESLAVAEDLSATRRDFVSQSAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSEVSAQPPPAEQATVELLPQLPPQPLQSLQLAMPPRSSAFRPVIAEQYTSKASSTAAAAICAYPKWFVPLSFPVTMGHLSNLAPRCNLPNCSCLDSYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00572614;
- 90% Identity
- iTF_00473080;
- 80% Identity
- -