Dmel007202.1
Basic Information
- Insect
- Drosophila melanogaster
- Gene Symbol
- dmd-4
- Assembly
- GCA_000001215.4
- Location
- JANZWZ010000441.1:66778-69564[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-25 5.7e-22 77.6 9.3 1 47 39 85 39 85 0.98 2 2 0.41 2.3e+03 -1.1 0.2 23 31 293 301 285 304 0.77
Sequence Information
- Coding Sequence
- ATGGCCAGTTCAAGTGGTGACCCTGCCGATGAAGTGGCTAATAAGCGTCCTCGTCTTGTGGCTAATCCCAAGGCCACCAAAATAGTTGAACCCACACCGGCCAAGGTCACCAATCGGGTGCCCAAGTGCGCCCGCTGCCGGAACCATGGGATCATTTCAGAGCTGCGGGGTCACAAGAAGCTCTGCACCTACAAGAACTGCAAGTGCGCCAAGTGTGTCCTGATCTTTGAGAGGCAGCGGATCATGGCCGCTCAGGTTGCCCTGAAGCGCCAGCAGGCGGTGGAGGATGCGATTGCCATGCGGCTGGTGGCCAACAAGACGGGTCGTTCCATCGATGCACTGCCGCCAGGCAACATCTTCGGTCTGACCGTCACGCAGCCTAGTTCGCCGCGTACCAAGCGGGAGGATGACCAGGTGGAGAAGACCATTTCGGAGGTGGAGCAGCAGCATTTGAAGCAGAGGGAGGAGGAGTACAGCGAATCGCCGGCGGTGGCGCAGGATCTCAGTGCTCCTCGAAGAGATAACGTCTCCCAAACGGCCATTGACATGCTTGCCCAGCTCTTTCCGCAGCGCAAGCGATCTGTCCTGGAGTTGGTCCTCAAGCGCTGCGATCTCGATCTGATTCGGGCCATTGAGAATGTCTCGCCCACTGGCAAGTCCTCGCCAGTGGATGTCACCAGCAACCACCCGAGGAGCAGCGCCTTTAGGCCCGTGATAACAGATCAGTACCAGAGCAAATCGGTGGTGGAGCTAAAGCCGCCGGTCTTTGGAGGCAGTGCATCAGCGGCGGCGGCAGCGGCCATTTGTGCGTACCCCAAGTGGTTTGTGCCGCTATCCTTTCCGGTGACCATGGGTCACCTCTCTAATCTGGCGCCAAGATGCACCTTGCCCAATTGCGCCTGCTTGGACAACTACCAGTTCCACTAG
- Protein Sequence
- MASSSGDPADEVANKRPRLVANPKATKIVEPTPAKVTNRVPKCARCRNHGIISELRGHKKLCTYKNCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIAMRLVANKTGRSIDALPPGNIFGLTVTQPSSPRTKREDDQVEKTISEVEQQHLKQREEEYSESPAVAQDLSAPRRDNVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPTGKSSPVDVTSNHPRSSAFRPVITDQYQSKSVVELKPPVFGGSASAAAAAAICAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCACLDNYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00596674; iTF_00592407; iTF_00539674; iTF_00619165; iTF_00591714; iTF_00504703;
- 90% Identity
- -
- 80% Identity
- -