Dmel020700.2
Basic Information
- Insect
- Drosophila melanogaster
- Gene Symbol
- PAXBP1
- Assembly
- GCA_000001215.4
- Location
- JANZWZ010000837.1:115816-119077[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-12 3.9e-08 33.5 2.9 28 163 400 495 372 511 0.81 2 2 0.0004 2.9 7.7 0.1 239 272 527 560 502 562 0.77
Sequence Information
- Coding Sequence
- ATGATCCAAACCGAAATACGCACAGACGACTTTGTGCTAGTGGTAAAGAAATCTGAGACTCCCGAGGCAATTCTGAACGGTAGAGCTGCCCTTTGCGCTGGACGGGAGGATATGAGCGATGAAGAAGACCAGCAACTGAGGATGATGCTCGAAAGTGGGCTAGAGAACAGGGTGCAGGCGACTATATACCTATTGAGGAGCCCAAGGAGCCGGCTGCTAAGCAACCGTCTGCCCTGCGAAGATGTTGAGGGTGATCAGTCGGATGATGAAGAACGCATGGACATGAACGATATTACGGGACGCAAAGAGCGTGAAGAGCGGCGCGAGCAATTTTATGCTGTCGAAAATGATTCCACCGACGGAGATTCAGATCGCGAGATGAACGAGTGGGAAAACCAGCAGATCCGCAAGGGTGTTACGGCAGCCCAGTTGGTCCATTCTCAGCATGAAACAGTGCTCTCCCGTTTTATGATCAAGCCTGCCCCGTCGGGCATCGGAACCGGCATGGACGACGGAGATTCAACAGCGGCACAGTCCACGTCCACTCTGCTGGAGCAGGCCTATGCTAAAAATGCCCTTGAGCGCACCAACTTAGCCGCAGCAGTTCGATCATCCGTCAAAACCAAGAAGGAAAAGGCCAAGGCTACAGCATTGCGAACTCCTCAGGAAATCCTAGCTGCCATTCAATCGCGTCTTAGCGAGCTTAAAGAGCGGTCGGCTGATCACAGCGCCAGTATGGCCAGGATTAGTACAGAACTAAAGCGCATTAAAGCTCCAGCAGTTGGAGTGCCAGCAGAATGCACCGACAGCGGCAGCAAAAAGCGTGCACTGCAACAGTATGGCAAAAATCAACGTTATTTGGTAAACAGACGGAGGCAGGATGTACGTGATCAGGCCAAAGAAATCGCCGAATCAGCAAAACCTATAACAGCTGCCTCCCGCCGAACACCTGATTATGAAGAACAAGTTCGCCGCGCAGCGGAACGGGAGGGTCGGAGGACACGTCGCCGATGCGAGCGCGAGCGCAATGATCTGCTCTCGTCCCACCTGGATGGCATGTCAAGCGACGATGAAATTGCCGATCAACAGCAGGAACTGAGTGTGACTACGATGGCGCAGATAGAATCACAGTCGGTGGACGCCCTTGAAGACGTTACCGACGACTTTAGCAAGATCGAGCTAATACTAATGAAGTTTTTTGCCTGGCTCTTGGCTCCGCTGGTGCGACACGAACTTGTTCTTTGGTCGCCACTGCTGGACGTGTATGCGGATATAGAAAATATGCGTTGGTATCAGGCCTGCATGCTTTATGCCTCCCAGGCAGATGAAACCGTGGAGCAGCTGAAAATCGATCCGGATATCAATCTGGTGCCGGCGCTCATCGAAAAGATTGTGCTGCCCAAGGTGACTGCTCTGGTCACAGAATGCTGGGATCCATTATCTACCACACAGACCCTGAGATTGGCTGTTCATCAATCGATTAGGTCGCGATTAGCCCTAGAAAATGATGTATTTATACCCATTTTTCCAAAGCAAGTGCAAGAGGCGAAGACTCTCATTCTTTCAGAGACAGTTTTGCAGTGGTCTAAAGCTGTTTCGAAATTTCTAAGCTGGCAGGGCATCCTGGCTGATAAGCTACTGCGTGAGCTGGCGATTGGAGCCCTTCTGAATCGTTACCTGTTATTAGCTATGCGAGTCTGCACGCCAAACGATGCCATAAACAAAGCTTACATCATTGGATATATTAAACAAACATTAGAGAACTGTGATGCAAGCAATCCAATCTTTATGCAATCCAGCGATAAAGCCAAGCAAATACTTCAAAGACTACATAGTTTATAA
- Protein Sequence
- MIQTEIRTDDFVLVVKKSETPEAILNGRAALCAGREDMSDEEDQQLRMMLESGLENRVQATIYLLRSPRSRLLSNRLPCEDVEGDQSDDEERMDMNDITGRKEREERREQFYAVENDSTDGDSDREMNEWENQQIRKGVTAAQLVHSQHETVLSRFMIKPAPSGIGTGMDDGDSTAAQSTSTLLEQAYAKNALERTNLAAAVRSSVKTKKEKAKATALRTPQEILAAIQSRLSELKERSADHSASMARISTELKRIKAPAVGVPAECTDSGSKKRALQQYGKNQRYLVNRRRQDVRDQAKEIAESAKPITAASRRTPDYEEQVRRAAEREGRRTRRRCERERNDLLSSHLDGMSSDDEIADQQQELSVTTMAQIESQSVDALEDVTDDFSKIELILMKFFAWLLAPLVRHELVLWSPLLDVYADIENMRWYQACMLYASQADETVEQLKIDPDINLVPALIEKIVLPKVTALVTECWDPLSTTQTLRLAVHQSIRSRLALENDVFIPIFPKQVQEAKTLILSETVLQWSKAVSKFLSWQGILADKLLRELAIGALLNRYLLLAMRVCTPNDAINKAYIIGYIKQTLENCDASNPIFMQSSDKAKQILQRLHSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -