Dmel016372.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila melanogaster
Gene Symbol
sip1
Assembly
GCA_000001215.4
Location
JANZWZ010000338.1:69162-71795[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-94 8.3e-91 304.7 12.7 3 275 380 647 378 647 0.98
2 2 0.49 3.6e+03 -2.4 0.0 245 266 662 683 653 701 0.57

Sequence Information

Coding Sequence
ATGTCGGACAACGATTACGAGCGTTTCGAGATAACGGACTACGATCTGGACAATGAGTTCAACATCAATCGGCCCCGAGGCCGCCAGAGCAGGCACCAACAGATCTACGGTATTTGGGCGGATGACAGCGAGGAGGAGAGTGGTGGCGAGGGCGGAACTAAGAGAAGGGGCGCGCCGCCCGTAAACCCAAAGACTACACCATGCCCGATCGCAAAAGAGGGAGCAGAGGCTGACCAGGGCGAGGAGAGCGACGATTCCGCCGCCAGCGGACGGCCAGCCTTCGGCCAGAACGATCCGGGCAGCTCCAACAGCTCATCGGAAGAGGAGAGGCCAACGCTGAGCCGGAAACAGCCAAGCACCACATTTCAGCATCGCTCCCACATCGCCAGCGAGCGCAACGTGGGCGCCTGGGAGCAGCATACACGCGGCATTGGAGCTAAGCTACTCCTTCAAATGGGCTATGAGCCTGGCAAGGGTTTGGGCAAAGATCTGCAGGGCATTTCGCATCCTGTGCAAGCCCATGTCCGCAAGGGCAGAGGTGCTATCGGCGCCTATGGACCCGAAACTGCGGCAAGCATCGGAGGAAAGACGAACAAGAGCATCAAAGTGGATGAGGACGTGCGCGAGGCGAAAGAGTTCAAAGACCAGCTGAACAAGTGGCGAAAGGGCTCAGCCGGTGGCGCCGAACCAATGGAGCGGCAGGGTAAGCGCTACTACTACAAGTCCGTGGAGGAGGTGATTGCCAAGGGTCACACGTCCGGCCACCTACTGTCGGAGAAGCTAAGCAAGAAACTGGGCAATGTGCGGGTGATCGATATGACAGGCCCAGAGAAACGAGTGCTGAGTGGCTATCATGCCTTGGGACAGGCAAAAATTACGCCAGAGGAGACGCTCTACGACACGGAGGCGACGGAAAAGGGATCCGCTCCCGCCTGCCTCTTGGTTAGCCAGTGCGAGCAGCAGATCATCGCCATCGACAACCAGGAACGCGAGTGTTCCAGCCAGCAGGCAGCGCTGGAAAGCGAGCACCGGAAACTGGAGGAGATAGTCCAGCTAGAACGAAACCACATACGCACGCTGGAGGAATCGTTGGAGCGCGTGGAGCGGTTAATCGATAATCCAGACTTGAGTTTACCTCAGGCTGAACGACTCTTTCGGGAGCTGCTCGTGGACTACGCTGCCGAATTCCATGAGTTCGGACTTGCAGATCTGGCAGCCGGTGTAATAGCGCCGCTCCTGAAGCGAGAACTAGTTCAGTGGCAGCCACTGGAAAACCCAACGGAACCGCTGCCACTCATCAAGAAATGGCGCGGCATGCTCCAGCAAGGAGATGCAGCAGAGCAGCAGCCCCGCAACGTCTTCGATCCGTACTCCTCGCTCATCTGGGCCGGCGTGATGCCTTCGTTTCGGTCCAGCGCTGCCGCATGGCAGCCGAAGGAGCATCCGCCAATGGCTTCACTCCTAGATGCCTGGGCACCCCTGCTACCTAGCTGGGTCTTGGATTCGGTTCTCGAGCAACTGGTTCTGCCACGACTGGTGGCTGGTGTCCAGGAGTGGGATCCGCTCACCGACACCGTTCCGATCGACAGTTGGGTGCTGCCGTGGCATGCCATCTTGGGCAGCAAGCTGGAGGAGGCCGTCTATCCTCAGATCCGCAGCAAATTGGGTATAGCATTGCGCGCCTGGTCACCGCATGACCGATCAGCCAGAGCCATGCTTACGCCCTGGCAGAAGGCCTTCCCCGAGGAAGAGATGCAAGAGTTCCTGCAGCGGTACATAGTGCCCAAACTGCAGGCGACTCTAGGCGAGCTCATCATCAATCCACTGCACCAGGACCTGGAGCTGTGGCAGCAGGTATGGGAGTGGCACGAGCTCATCGATCCCATGTACATGGCCCAACTACTGGACAGACACTTCTTCCCGCGCTGGATGCAAGTGCTCGTCGTCTGGCTGAATCAGTCGCCGGACTACGCGGAGATCTCGCGATGGTACACCGGCTGGAAGAGCATGTTGAGCGAACCGCTTCTGCGCGAGCCCAGCGTTAAAGAGCATCTGCGGCGAGCACTGGAAATTATGCACAGAGCCAGCGATACCCTGCTGCAGCCCACGGTGACGCCCACGCCCCCGCCTCCAGTTCCTCCGGCTCCAGTCATAATGATGGACCTGATTCATCCGCCCGCTCAGCTGGAGTTCAAAGAGTTGGTATCGCAGCAATGCGCCGACTTGGGAATCATCTTCGCTCCTCTGCCAGGGCGACGGGAGATGGGCAAACAGATTTATCGTGTGGGAAAGCTGTTTTGCTACATCGATCGTCACGTCTGCATGGTCAGCGATGGCAGCTTCAGCAACTGGAAGCCGGTGTCGCTAAATCATCTGCTAGAACGCTCTCAAACGGGAATTCTTTAA
Protein Sequence
MSDNDYERFEITDYDLDNEFNINRPRGRQSRHQQIYGIWADDSEEESGGEGGTKRRGAPPVNPKTTPCPIAKEGAEADQGEESDDSAASGRPAFGQNDPGSSNSSSEEERPTLSRKQPSTTFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISHPVQAHVRKGRGAIGAYGPETAASIGGKTNKSIKVDEDVREAKEFKDQLNKWRKGSAGGAEPMERQGKRYYYKSVEEVIAKGHTSGHLLSEKLSKKLGNVRVIDMTGPEKRVLSGYHALGQAKITPEETLYDTEATEKGSAPACLLVSQCEQQIIAIDNQERECSSQQAALESEHRKLEEIVQLERNHIRTLEESLERVERLIDNPDLSLPQAERLFRELLVDYAAEFHEFGLADLAAGVIAPLLKRELVQWQPLENPTEPLPLIKKWRGMLQQGDAAEQQPRNVFDPYSSLIWAGVMPSFRSSAAAWQPKEHPPMASLLDAWAPLLPSWVLDSVLEQLVLPRLVAGVQEWDPLTDTVPIDSWVLPWHAILGSKLEEAVYPQIRSKLGIALRAWSPHDRSARAMLTPWQKAFPEEEMQEFLQRYIVPKLQATLGELIINPLHQDLELWQQVWEWHELIDPMYMAQLLDRHFFPRWMQVLVVWLNQSPDYAEISRWYTGWKSMLSEPLLREPSVKEHLRRALEIMHRASDTLLQPTVTPTPPPPVPPAPVIMMDLIHPPAQLEFKELVSQQCADLGIIFAPLPGRREMGKQIYRVGKLFCYIDRHVCMVSDGSFSNWKPVSLNHLLERSQTGIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00609159;
90% Identity
-
80% Identity
-