Dmel003678.1
Basic Information
- Insect
- Drosophila melanogaster
- Gene Symbol
- -
- Assembly
- GCA_000001215.4
- Location
- JANZWZ010000797.1:5166-22209[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1 4.6e+03 -2.3 3.1 113 129 173 189 154 207 0.47 2 4 0.44 2e+03 -1.1 3.3 88 141 299 352 288 373 0.82 3 4 1.5e-17 6.9e-14 52.5 0.1 22 122 447 545 443 553 0.88 4 4 0.39 1.7e+03 -0.9 4.8 102 133 863 895 843 918 0.61
Sequence Information
- Coding Sequence
- atggtgggccatcactatgcccatcacaataatagcaacaatggcggcaataacaacacaaatttccaagcctatcagcatcattacaaaagtaaTTTCGGCATGAGAATGACCATGTCCACCAATTCCACAATGAGTGCGCGTATACATCGAAAAGGATTTCGCATACCATCGAAAAGACAGCCGGGTAAGGGATTGCCCGGCAAGTTGCACACCATAACCAGGACGGGTCCTGGCAAAATGGTTCCTGGGAAGCGAATACCACAGCGACCCCATCCGCCGCCCTGCGACAACTCGAACGACAGTGGGCTGGGTTTTGATCAGCACACGGAGCTGAGATCCTcggcaggagctggaggcgttaccgatccggcggccaatggaggcagtggctccaactctggccagcgatccagtttgctggtcaatagcgctttaaccaacacagtggctgctgcagcagccgcggcagctgccgcggtggccagcaacacgttgcagcagcatcagcagcaccatcaacagcagcagcagcaacagcagcaacaacagcagcagcagcagcaacaacagcagcagcagcaacaacattcaccgcagcagcatttaatcagagcgatacctgtatcaagATCGCGGAACAACACGAAAGTGATGGCTCACTGTCTGGAGGATCTGGACCTAATATCGGCGTCCTCGGAGGACAGCTCGACCATCGCAACGCCGGCCGGTTTGGACGAGGACACGGGCTTTGTGAACGACACCAAaacgacgacaaccggtggcaatagtagttcggatccatttggaggcgtctttcaggcaaccgaggcagccgtggcagcagccgttaatgccttcaacttgcaacagcagcagcattcggtgcaacagcaacagcatcaactctttcagtacaacggattgctgttgcagccgcagcagcaattgcagcagcaacagtcgcatcaccaacaacaacaacaacagcaacagcatcaccgccatggcaagcatatcaaacgcaagaagctcgagtgcaaccaagtggaactggacaacgatgatgcctgcagcGAGGATGAGTTCATTCGCAAGATTGCCAGTTCGGTAACGATccttctgccgctcatcagcagcggcaacagcaacaacaacaacaacaacaacaacattgagacaaaATTCATATCGGCCAGGAATGTCACGCGTGTGGCGAACAAACGTCAACCCACTACACCGCTGAACAGCGTCGCCAGCTCAACGATGGCCAGGTGCAGCTGGAGATTTTGTCGCAGCCGGAGCAACAGCACCGGGCACGCTATCAAACGGAGGGTCAGCCGCGGTGCCGTCAAGGATCGCAGCGGCAATGGATTCCCGATCGTCCGACTGACCGGATACGATAAGGTTGCCGTCCTCCAGGTCTTCATCGGCACGGACATTGGACGCGTGGCACCGCACATGTTCTATCAGGCCTGCAAGGTTGCCGGCAAGAACTCGACGCAGTGCAACGAGAAGAAGCCCGAAACGGACATGACCATCACATGCGATTGCGTTGGAATCTTGAAGGAACGCAATGTGGATGTGGAGCACCGATTTCCCGAGCATCTGGCGCAAAGAACAAGAAGAAATCGACTCGCTGCGGATGGTGTTCCGCACCCAGGTGACCCCGTGACGATGGCACCACCGAGACCCTTCAGGTCTGCTCGAATCAATCATCTGCACTCAACCACCTGGCGTGCCGGAAATATACAGAAATCCTTAAACTCATGTCCCGAGACATACGACAGCGTCAACGGTGACGATCCGGCCACGGAAATTGCAGTGCGCCAGCAGCTCATCGGCAGTACAGCCGCTCTTTGGGAACAGAGTGTTCTGCCGGATAGAATATCTGATATGCACGGTGCCACCGTATCTGCACCAGAACATCCTGAAACCGGTCCAGGTTCAAGTGTCGATCGTCTCCAGCGGCAAGAAGAGCGAACCGCATACGTTCACCTACACGGCCAAGGGACAGTACACGACGCTGGCGGCGGCCAGCACGTTGAAAGTAACACAATCCACGCCCAAGATGTGAGCGGTTTCATGGACACCACATCAGCGTCCAATGCGAGTGGCTCCAGTGGTTGGAGTGCGGCAGGCGGTTCCGGCAACAATACATCTACAGGCGATAATGTGGAGGCCAAACACGAGATCGATTCGGGCATGATGCCTCCGCCCATTACCACCCAAATACCGATGGGCGTTCGACGCTCCTCGCTGCCCAGTGTCACACCCATGATCACGGACCAACAGCTGGTCCATCTCAACGCAGTGGCGGCCAGTGCCGAGGCCCTGAAGACGGAACTCGACGACAGCAACTCGCATAGCCCACTGACCGGTGAATCCACACCGGATAGCCCCAACGCAGCCTTGCACCTGGACACCATTATGTACGATCAGTCGAACAGTCTGCCCGGTTTCCCGACCGTTgtggcgccggctacagctgccgccgtggccgctgcagttgatattgatccgacggcggtggccgtggcggtggaactggccgtaaaaaatgagattgtcaagcatgtcgtacagcagcaccagcagatgcaggagcaaatgcacgagcagcagcagcagcaacagcagcagcaacaacaacaacaacagcagcaacaacaacagccccaacagcagcagcggcaacaggtgcacaagtttattgacgagctgaccaaatccacatcggtggtttccagcaATGGTACCACCGAACCAGCTCTGTTCACCACCTCGGCGGTGATCGATCATGCCCTGACCGATATTCTGCAGGCCAAAGTTGGCATTGCGCCGCCCAATGTGGTGCTGGAAAGGAGCTTTGTCCCTAAGCTCCACAAATTCCAGCAGCTCCATGAGCGGCAGATATCATACTCAATTCAGAACCGGCAGCAGCTCTGGCCGGAGCTGCTGCCCTTGGGTGGCCCGGCGCCTGTCGATGTCACCGGTGGTCTGTCCACCGATATCATTATGAATCCCGCCGTTTCACCATCGACTATTTTGTGCTCCGCAAATGGAGCGGCCACTGCCGTAGTGCCGAATATACTCGCACCTCACCAAGTGACCATGGCCAACTCCATTTTGAACGATATTGCCATGCAGCCGGAACCAACACAGCAGGATGCAGCAGTAGCAGCCTTGGCGTTGAGCAACATCATGATGAGTCCACCCACCGCGGCATCGGGTGTGGGAGTTGGTGACACACTGCCACCAACACCAGCTACTATGCAGCCAGAGGTCGCAGCCACTGCCACATCCACTGCGGTCAGCAACATGATTATTAAGGCGGCGGCGGACTTTATAACCACCCAGGAGCAGGAGCAACACCACTACCATCACCACGGCAGCTGTCGGGTGAGCGGTAATCCTGCCGAGACGGCATCGGATCCATTGGTTGACCTGCTATTGAACCACTCAAACACACCAGAAACAGCGGCTGCTGCCGCTGCCGCAGTAGCTGTAGAAGCAGCCAACTTCCAGTCGATGAATCACAGTCACCACAGCCATCATGGTCATCATGGTCACAGTCACGGCCACGGCCATAGTCGCGTCACAGGACACGTATCCGGGCATGTGACCAGCCACCATCGTGGTCACCACTTGCCGGTGGTGCCGCCGACACCACAAGAATCTCTGATCGTTGCGCTGGCCAGCGAGAATGCTCTGCAAAGTCGGTGGCCACCGCCGCGTAGTGACCACCAATGGAGCACGGTTGGAGCGGTAGCTGCGGCGGCCGCCGTGGCGGTGCAGCCGCCCATTCCCCAGGAGCTGACCACGATGTCGGATCAGGATCTGATCAGCTACATCAACCCGAGCACCTTTGATCAGCTTTAA
- Protein Sequence
- MVGHHYAHHNNSNNGGNNNTNFQAYQHHYKSNFGMRMTMSTNSTMSARIHRKGFRIPSKRQPGKGLPGKLHTITRTGPGKMVPGKRIPQRPHPPPCDNSNDSGLGFDQHTELRSSAGAGGVTDPAANGGSGSNSGQRSSLLVNSALTNTVAAAAAAAAAAVASNTLQQHQQHHQQQQQQQQQQQQQQQQQQQQQQQHSPQQHLIRAIPVSRSRNNTKVMAHCLEDLDLISASSEDSSTIATPAGLDEDTGFVNDTKTTTTGGNSSSDPFGGVFQATEAAVAAAVNAFNLQQQQHSVQQQQHQLFQYNGLLLQPQQQLQQQQSHHQQQQQQQQHHRHGKHIKRKKLECNQVELDNDDACSEDEFIRKIASSVTILLPLISSGNSNNNNNNNNIETKFISARNVTRVANKRQPTTPLNSVASSTMARCSWRFCRSRSNSTGHAIKRRVSRGAVKDRSGNGFPIVRLTGYDKVAVLQVFIGTDIGRVAPHMFYQACKVAGKNSTQCNEKKPETDMTITCDCVGILKERNVDVEHRFPEHLAQRTRRNRLAADGVPHPGDPVTMAPPRPFRSARINHLHSTTWRAGNIQKSLNSCPETYDSVNGDDPATEIAVRQQLIGSTAALWEQSVLPDRISDMHGATVSAPEHPETGPGSSVDRLQRQEERTAYVHLHGQGTVHDAGGGQHVESNTIHAQDVSGFMDTTSASNASGSSGWSAAGGSGNNTSTGDNVEAKHEIDSGMMPPPITTQIPMGVRRSSLPSVTPMITDQQLVHLNAVAASAEALKTELDDSNSHSPLTGESTPDSPNAALHLDTIMYDQSNSLPGFPTVVAPATAAAVAAAVDIDPTAVAVAVELAVKNEIVKHVVQQHQQMQEQMHEQQQQQQQQQQQQQQQQQQQPQQQQRQQVHKFIDELTKSTSVVSSNGTTEPALFTTSAVIDHALTDILQAKVGIAPPNVVLERSFVPKLHKFQQLHERQISYSIQNRQQLWPELLPLGGPAPVDVTGGLSTDIIMNPAVSPSTILCSANGAATAVVPNILAPHQVTMANSILNDIAMQPEPTQQDAAVAALALSNIMMSPPTAASGVGVGDTLPPTPATMQPEVAATATSTAVSNMIIKAAADFITTQEQEQHHYHHHGSCRVSGNPAETASDPLVDLLLNHSNTPETAAAAAAAVAVEAANFQSMNHSHHSHHGHHGHSHGHGHSRVTGHVSGHVTSHHRGHHLPVVPPTPQESLIVALASENALQSRWPPPRSDHQWSTVGAVAAAAAVAVQPPIPQELTTMSDQDLISYINPSTFDQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -