Dmea013479.1
Basic Information
- Insect
- Drosophila melanica
- Gene Symbol
- dsx
- Assembly
- GCA_004143765.1
- Location
- SCDT01003844.1:21816-22820[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.9e-25 3.6e-21 74.9 11.1 2 47 41 86 40 86 0.97 2 3 5 2e+04 -19.2 18.3 10 20 135 145 120 152 0.66 3 3 3.8 1.5e+04 -3.9 0.9 30 34 271 275 271 276 0.64
Sequence Information
- Coding Sequence
- ATGGTTTCTGAGGAGAACTGGAACAGCGATACCATGTCCGACTCGGACATGCTCGACTCGAAGAACGACGTCTGCGGCGGCGCGTCCAGCTCCAGCGGCAGCTCCATCTCGCCGCGCACGCCGCCCAACTGTGCGCGCTGCCGCAACCACGGCCTGAAGATCACGCTGAAGGGCCACAAGCGGTACTGCAAGTACCGCTACTGCACCTGCGAGAAGTGCCGCCTCACCGCCGACCGCCAGCGCGTGATGGCGATGCAGACGGCGCTGCGGCGCGCCCAGGCGCAGGACGAGCAGCGCTCGCTGCACATGCACGAGGTGCCGCCGCCGGCGGGCGCCACCACGGCGCTGCTCAGCCACCACGGCGGCCATCACCACCATGTGCATGgccacggccacgcccacagtcacggccacgcccacgcacaTCACGGCCACGGACACGGCCATCATGGCCACCTGCTGCACCACCAGCAGACAGCGTCGTCGGCACCGCCACCTCCCCCGCTCGATCACGGCGCTGCCACCAGCAGCtccggcggcggtggcgccaCCTCCACCAATGTGGCAACTGCCACAAGCAGCGCCGCcagtagcagcggcagcactGCAGGAGGCGGCGGAGGTGGCGGAGGAAGCGGCAGTGGCGGCATCAGCGTCATAACCAGCGCTCACCACATGTCCACGGTGCCAACGCCCGCACAGTCGCTCGAGGGCTCCTGCGACTCATCTTCGCCGTCGCCATCGTCCACGTCGGGCAACGCCCATCTGCCCATTTCCGTGTCCAGCACACGCAAGAATGTGCCGTTAGGTGAGTGCTCCAATTGCACATAG
- Protein Sequence
- MVSEENWNSDTMSDSDMLDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKYRYCTCEKCRLTADRQRVMAMQTALRRAQAQDEQRSLHMHEVPPPAGATTALLSHHGGHHHHVHGHGHAHSHGHAHAHHGHGHGHHGHLLHHQQTASSAPPPPPLDHGAATSSSGGGGATSTNVATATSSAASSSGSTAGGGGGGGGSGSGGISVITSAHHMSTVPTPAQSLEGSCDSSSPSPSSTSGNAHLPISVSSTRKNVPLGECSNCT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -