Basic Information

Insect: Drosophila mauritiana
Gene Symbol: ct_1
Assembly: GCA_004382145.1
Location: NC:7384763-7460143[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 6.1e-27 4.2e-23 80.8 0.0 3 72 880 950 878 955 0.95

2 3 6e-32 4.1e-28 96.8 0.0 3 77 1334 1409 1332 1411 0.96

3 3 3.7e-31 2.5e-27 94.3 0.0 3 76 1612 1686 1610 1689 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	6.1e-27	4.2e-23	80.8	3	72	880	950	878	955	0.95
2	3	6e-32	4.1e-28	96.8	3	77	1334	1409	1332	1411	0.96
3	3	3.7e-31	2.5e-27	94.3	3	76	1612	1686	1610	1689	0.96

Sequence Information

Coding Sequence: ATGCAGCCAACATTGCCACAAGCCGCTGGGACAGCCGATATGGATCTGACGGCTGTTCAATCAATCAACGATTGGTTTTTCAAAAAGGagcaaatttatttattggcacAGTTTTGGCAACAGcGCGCAACCCTTGCCGAAAAGGAAGTGAACACACTCAAAGAGCAGCTATCCACCGGCAATCCCGAAAGCAACCTCAACAGCGAAAACAGCGAtacagcggcagcggcagcaacagcagcagcagttgcagcagttgttgcaggagcaacagcaacaaacgACATCGAGgacgagcagcagcaacagttgcagcAGACGGCCAGCGGCGGCATTTTGGAAAGCGACAGCGACAAGCTGCTGAACAGCTCCATTGTTGCAGCGGCCATAacgctgcagcagcagaacgGCAGCAATCTGCTGGCCAACACAAACACGCCGTCGCCCTCGCCGCCGTTGCTCAGcgccgagcagcagcagcagttgcagagCAGTTTGCAACAGAGCGGCGGTGTTGGCGGCGCCTGCCTCAATCCCAAGCTTTTCTTCAATCACGCCCagcagatgatgatgatggaggCGGCAGccgcggcagcagcggcggcattgcaacagcagcagcaacagcaatcaCCCCTCCATTCGCCGGCGAATGAAGTTGCGATTCCCACAGAACAGCCAGCGGCAACGGTAGCAACAGGAGCCGCTGCtacagcagccgcagcagcaacaccgaTTGCAACTGGCAACGTCAAGAGcggcagcaccaccagcaacgTCAATcacaccaacagcaacaatagtcaccaggacgaggaggagctggacgaagaggaggaggaggaggaggatgaggacgaggatgaTGAGGAGGAGAATGCCTCGATGCAATCGAATGCTGATGACATGGAGCTGGATGCGCAGCAAGAAACCAGAACTGAGCCAAGTGCAACAacacaacagcagcatcagcaggaTGCAGAGGATCTTGAGGAGAACAAGGATGCGGGGGAGGCTAGTTTAAATGTTAGCAATAATCACAATACAACCGATAGCAATAATAGTTGTAGTCGAAAGAACAACAATGGCGGCAACGAAAGTGAGCAACATGTGGCCAGTTCGGCGGAGGACGATGATTGCGCCAACAACAATACAAATaccagcaataacaacaataccAGCAAcaccgccaccagcaacacgaacaacaacaataataacaacagcagcagcggcaacagcgagaagcgcaagaagaagaacaataacaacaacaacggccaGCCTGCTGTTCTATTAGCTGCCAAAGATAAAGAGATTAAAGCACTTCTGGACGAACTGCAGCGCTTGAGGGCGCAGGAGCAGACGCATCTGGTGCAGATCCAGAGACTGGAGGAACATCTTGAGGTCAAGCGTCAGCACATCATTCGATTGGAGGCACGTCTGGATAAGCAGCAAATTAATGAGGCGCTGGCCGAGGCGACCGCTTTGTCAGCTGCCGCCgcaaccaacaacaacaataatagcCAGAGCAACGACAACAATAAGAAGCTTAATACCGCTGCAGAAAGAGCGATGGATGCGTCATCATCCATTGCCGATCTACCGGAGTCCACAAAGGCTCCAGTTCCGACGGAGGATGACGAAGAAGATGAGGATCAGGCCATGCTGGTGGATTCCGAGGAAGCGGAGGACAAGCCAGAGGACTCACATCACGATGACGACGAAGATGAGGACGAGGATCGGGAGGCGGTCAATGCCACCACAACCGATAGCAACGAGctcaaaatcaaaaaggaaCAGCACAGTCCGCTGGATCTAAATGTGCTCAGTCCGAATTCGGCCATTGCCGCTGCAGCTGcggccgccgctgccgccgcctgCGCTAATGACCCCAACAAATTCCAGGCTCTGCTCATCGAGCGGACCAAAGCCTTGGCCGCAGAGGCGCTCAAGAATGGTGCCAGCGATGCCCTCAGCGAAGATgcccaccatcagcagcaccaccaacagcagcaccaccaccagcaacaacaccaccagcaacagcacctCCACCAGCAACATCACCATCACCTGCAACAACcaagcagcggcagcaacagcaatccAGCGAACAACGACCACCATCATGGACACCATTTGCATGGCCATGGCTTGCTGCATTCTTCGGCGGCGCACCATCTGCACCACCAGACGACCGAATCTAATTCGAATTCGAGTACACCCACAGCGGCGGGAAATAACAATGGTAGCAACAACAGCTCCAGCAACACAAATGCCAATAGTACCGCTCAATTGGCCGCCAGTTTGGCCAGTACACTCAATGGCAGCAAGTCCCTGATGCAGGAGGATAGCAATGGCTTGGCCGCCGCCGCCATGGCGGCTCATGCCCAACATGCGGCAGCCTTGGGACCAGGATTTTTGCCCGGCCTTCCAGCCTTTCAGTTTGCCGCCGCCCAAGTGGCCGCCGGTGGCGATGGACGGGGTCATTACCGTTTCGCCGACTCGGAACTGCAATTGCCACCGGGTGCTTCGATGGCCGGTCGTCTTGGAGAATCGCTCATACCCAAGGGTGATCCCATGGAGGCCAAGCTTCAGGAGATGTTGCGCTACAACATGGACAAGTACGCCAATCAGGCGCTGGATACCCTGCACATTTCGCGACGTGTCCGCGAACTGCTATCGGTGCACAACATTGGCCAGCGACTATTTGCCAAATACATACTGGGCCTGTCGCAGGGCACCGTTTCCGAGCTGCTGAGCAAACCCAAGCCGTGGGACAAGTTGACGGAGAAGGGACGCGATAGCTACCGTAAAATGCACGCCTGGGCCTGTGACGATAATGCCGTCATGCTGCTTAAATCGCTGATACCCAAGAAAGATTCTGGACTGCCGCAGTATGCTGGTCGTGGAGCCGGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATAGGATTGCACATATCCTCAGCGAAGCCTCTTCGCTGATGAAACAGAGCAGTGTGGCCCAGCATCGGGAACAGGAGCGTCGCAGTCACGGCGGCGAGGATTCACACAGCAACGAGGACAGCAAATCGCCACCGCAGAGCTGCACGTCGCCGTTCTTCAAGGTGGAACAGCAGCTGAAGCAGCACCAGCATCTTAATCCCGAGCAGGCTGCTGCCGCTCAGCAAAGGGAAAGGGAACGCGAGCAACGAGAacgggagcagcagcagcgactgCGGCACGACGACCAAGACAAGATGGCTCGTCTCTACCAGGAGCTGATTGCACGCACCCCGCGTGAGACGGCTTTTCCAAGCTTTCTCTTCTCACCCTCGCTATTTGGAGGAGCTGCTGGCATGCCAGGAGCAGCCAGCAATGCCTTTCCCGCCATGGCCGATGAAAATATGCGTCACGTCTTTGAACGTGAGATTGCcaagctgcagcagcaccaacagcaacaacaagctgCCCAGGCTCAGGCACAGTTCCCCAACTTCTCGAGCCTGATGGCTCTGCAACAGCAGGTTCTCAACGGAGCCCAGGATCTCTCGTTAGCTGCCGCTGCAGCCAAGGACATCAAGTTGAACGGTCAGCGATCCTCGTTGGAGCACAGTGCCGGCAGCAGCAGTTGTTCAAAAGATGGCGAACGAGATGATGCGTATCCAAGTTCCCTACATGGTCGCAAATCCGAGGGAGGTGGCACACCCGCACCACCTGCCCCACCATCTGGCCCAGGAGCCGGAGCAGGAGCCCCACCCacagcagcaccaccaaccGGGGGTGCCAGCAGCAATTCGGCAGCACCCAGTCCCCTAAGCAATTCAATCCTTCCACCGGCATTGAGCAGCCAAGGGGAGGAGTTCGCCGCGACAGCAAGTCCTTTGCAGCGAATGGCCTCGATCACCAATTCACTGATTACCCAACCCCCGGTGACGCCGCACCACAGTACGCCACAGCGACCCACCAAGGCGGTTCTGCCACCGATCACCCAGCAACAGTTCGATATGTTCAACAACCTTAACACCGAGGATATAGTCAGACGTGTGAAGGAGGCCCTGTCGCAGTACTCCATCTCCCAGCGATTGTTCGGCGAGTCCGTGCTGGGTTTGTCGCAGGGATCGGTCTCCGATTTACTGGCTAGACCCAAGCCATGGCACATGCTCACTCAAAAGGGCCGTGAACCCTTCATTCGCATGAAGATGTTCCTTGAGGATGAGAACGCGGTGCACAAACTGGTGGCCAGTCAATACAAGATTGCCCCCGAGAAGCTAATGCGAACGGGCAGTTACAGTGGAAGTCCGCAGATGCCACAGGGATTGGCAAGCAAAATGCAGGCTGCCTCCTTGCCCATGCAGAAGATGATGAGCGAACTCAAGCTGCAGGAACCAGCACAGGCGCAGCACTTAATGCAACAAATGCAGGCGGCGGCCATGTCGGCAgcaatgcagcagcagcaagtggCGCAAGCGCAGCAGCAGGCTCAGCAGGCGCAACAGGCACAACAGCATttgcagcagcaggcgcagcagcatttgcaacagcagcaacatctcgcccagcagcaacacccCCATCAGCAGCACCATCAAGCAGCCGCAGCGGCTGCCGCATTGCACCACCAAAGCATGCTTCTGACCTCGCCCGGACTGCCACCCCAGCATGCCATCAGCCTGCCACCTTCAGCGGGTGGAGCCCAACCAGGGGGTCCTGGTGGTAATCAGGGTAGCTCAAATCCCTCAAACAGCGAAAAGAAACCCATGCTGATGCCGGTTCATGGCACAAATGCCATGAGAAGTTTACACCAGCACATGTCGCCCACCGTTTACGAAATGGCCGCTTTAACCCAAGATCTGGACACCCACGACATCACCACCAAGATCAAGGAGGCGTTGTTGGCCAACAATATTGGCCAGAAAATATTTGGCGAAGCCGTTTTGGGACTTTCCCAGGGATCCGTATCTGAGCTGCTGAGCAAACCGAAGCCCTGGCACATGCTCTCCATCAAGGGCAGGGAACCCTTCATCCGGATGCAATTGTGGCTCAGTGATGCCAACAATGTGGAACGATTGCAGTTGCTGAAGAATGAGCGACGCGAGGCCAGCAAACGAAGGAGGAGCACGGGCCCGAACCAACAGGACAATAGTAGCGATACCTCCAGCAATGATACCAATGACTTCTATACCAGCAGTCCGGGTCCAGGATCCGTCGGTTCGGGTGTCGGTGGTGCTCCGCCGAGCAAAAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTCCGTCTGGCATTCGCCTTGGATCCGTATCCAAATGTGGGCACCATCGAGTTTCTGGCCAATGAGTTGGGCTTGGCAACGCGGACGATCACCAACTGGTTCCACAATCATCGCATGCGATTGAAGCAACAGGTGCCACACGGACCTGCCGGTCAAGATAATCCGATACCGAGTCGCGAGAGTACAAGTGCCACGCCCTTCGATCCCGTCCAATTCCGCATTCTGCTGCAGCAGCGTCTACTGGAGCTCCACAAGGAACGAATGGGCATGAGCGGTGCCCCCATTCCCTATCCGCCGTActttgctgccgctgccattTTGGGCCGCAGTCTGGCGGGGATTCCCGGTGCGGCAGCGGCCgcaggagcagctgcagcagccgccgcAGTTGGCGCCTCTGGCGGTGATGAGTTGCAGGCCCTGAATCAGGCCTTCAAGGAGCAGATGAGCGGTCTGGATCTGTCGATGCCCACCTTAAAGCGGGAACGCAGCGATGACTATCAGGACGATTTGGAACTGGAGGGCGGTGGCCACAATCTTAGCGACAACGAATCGCTGGAGGGTCAGGAGCCGGAGGACAAGACCACCGACTACGAGAAGGTGCTGCACAAATCCGCTTtggccgctgccgccgcttACATGTCCAATGCAGTGCGGAGCTCACGACGAAAGCCAGCTGCCCCACAGTGGGTCAATCCCGCCGGAGCGGTGACCAATCCAAGTGCTGTAGTTGCAGCCGTTGCTGCGGCCGCAGCTGCCGCGGCGGACAATGAACGAATCATCAACGGGGTGTGCGTGATGCAGGCCTCCGAGTACGGCCGCGATGATACTGATAGCAACAAGCCAACGGACGGCGGCAATGATTCCGATCATGAGCACGCCCAGCTGGAGATCGATCAGCGTTTCATGGAACCGGAGGTGCACATCAAACAGGAAGAGGACGACGATGAGGAGCAATCGGGATCGGTTAATCTGGACAACGAGGACAATGCGACTAGCGAGCAAAAACTGAAGGTGATCAACGAAGAGAAGCTGCGAATGGTCCGAGTTCGCCGGCTGAGCAGCACTGGTGGTGGTTCCTCTGAGGAAATGCCAGCTCCCCTCgcaccaccgcctcctccaccAGCAACTTCTTCTATCGTCAGTGGAGaaagcaccaccagcagcagcagtagtagcagcagcaacaccagcagcagcacaccAGCGGTAACGACTGTAGCTGCAACTGCGGCAGCCGGTTGGAACTATTAA
Protein Sequence: MQPTLPQAAGTADMDLTAVQSINDWFFKKEQIYLLAQFWQQRATLAEKEVNTLKEQLSTGNPESNLNSENSDTAAAAATAAAVAAVVAGATATNDIEDEQQQQLQQTASGGILESDSDKLLNSSIVAAAITLQQQNGSNLLANTNTPSPSPPLLSAEQQQQLQSSLQQSGGVGGACLNPKLFFNHAQQMMMMEAAAAAAAAALQQQQQQQSPLHSPANEVAIPTEQPAATVATGAAATAAAAATPIATGNVKSGSTTSNVNHTNSNNSHQDEEELDEEEEEEEDEDEDDEEENASMQSNADDMELDAQQETRTEPSATTQQQHQQDAEDLEENKDAGEASLNVSNNHNTTDSNNSCSRKNNNGGNESEQHVASSAEDDDCANNNTNTSNNNNTSNTATSNTNNNNNNNSSSGNSEKRKKKNNNNNNGQPAVLLAAKDKEIKALLDELQRLRAQEQTHLVQIQRLEEHLEVKRQHIIRLEARLDKQQINEALAEATALSAAAATNNNNNSQSNDNNKKLNTAAERAMDASSSIADLPESTKAPVPTEDDEEDEDQAMLVDSEEAEDKPEDSHHDDDEDEDEDREAVNATTTDSNELKIKKEQHSPLDLNVLSPNSAIAAAAAAAAAAACANDPNKFQALLIERTKALAAEALKNGASDALSEDAHHQQHHQQQHHHQQQHHQQQHLHQQHHHHLQQPSSGSNSNPANNDHHHGHHLHGHGLLHSSAAHHLHHQTTESNSNSSTPTAAGNNNGSNNSSSNTNANSTAQLAASLASTLNGSKSLMQEDSNGLAAAAMAAHAQHAAALGPGFLPGLPAFQFAAAQVAAGGDGRGHYRFADSELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGAGGDDSMSEDRIAHILSEASSLMKQSSVAQHREQERRSHGGEDSHSNEDSKSPPQSCTSPFFKVEQQLKQHQHLNPEQAAAAQQREREREQREREQQQRLRHDDQDKMARLYQELIARTPRETAFPSFLFSPSLFGGAAGMPGAASNAFPAMADENMRHVFEREIAKLQQHQQQQQAAQAQAQFPNFSSLMALQQQVLNGAQDLSLAAAAAKDIKLNGQRSSLEHSAGSSSCSKDGERDDAYPSSLHGRKSEGGGTPAPPAPPSGPGAGAGAPPTAAPPTGGASSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQAASLPMQKMMSELKLQEPAQAQHLMQQMQAAAMSAAMQQQQVAQAQQQAQQAQQAQQHLQQQAQQHLQQQQHLAQQQHPHQQHHQAAAAAAALHHQSMLLTSPGLPPQHAISLPPSAGGAQPGGPGGNQGSSNPSNSEKKPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPAGQDNPIPSRESTSATPFDPVQFRILLQQRLLELHKERMGMSGAPIPYPPYFAAAAILGRSLAGIPGAAAAAGAAAAAAAVGASGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDLELEGGGHNLSDNESLEGQEPEDKTTDYEKVLHKSALAAAAAYMSNAVRSSRRKPAAPQWVNPAGAVTNPSAVVAAVAAAAAAAADNERIINGVCVMQASEYGRDDTDSNKPTDGGNDSDHEHAQLEIDQRFMEPEVHIKQEEDDDEEQSGSVNLDNEDNATSEQKLKVINEEKLRMVRVRRLSSTGGGSSEEMPAPLAPPPPPPATSSIVSGESTTSSSSSSSSNTSSSTPAVTTVAATAAAGWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539559; iTF_00596548; iTF_00592293; iTF_00592181; iTF_00596443; iTF_00505191; iTF_00505307; iTF_00604744; iTF_00604625; iTF_00547852; iTF_00547964; iTF_00602484; iTF_00602372; iTF_00504474; iTF_00504584;
90% Identity: iTF_00596548;
80% Identity: iTF_00539559;