Dmac000556.1
Basic Information
- Insect
- Drosophila maculinotata
- Gene Symbol
- -
- Assembly
- GCA_035045305.1
- Location
- JAWNPD010000038.1:1409170-1410602[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 7.3e-06 0.0098 16.0 0.1 15 44 88 114 81 114 0.88 2 7 0.65 8.8e+02 0.1 0.2 19 41 123 142 123 145 0.70 3 7 0.0046 6.1 7.0 2.4 2 41 135 170 134 173 0.87 4 7 0.0069 9.3 6.4 1.7 2 41 163 198 162 201 0.86 5 7 0.0065 8.8 6.5 0.8 2 40 191 225 190 228 0.86 6 7 1.5 2.1e+03 -1.1 0.1 18 26 234 242 230 247 0.82 7 7 0.0017 2.2 8.4 2.5 5 44 250 285 246 285 0.84
Sequence Information
- Coding Sequence
- ATGGAGCAAACGATAGATGTGGGGTGCGTCAAAGAGGAACACTGTGAGGCCATGTGCAATATGTTTAAAACACAAGATTGGCAATTAACAATGCGACACAGAGATCTGGGACTAGTTAAAATCGAGCAGGATATGAGTTTTGTGTGGCAAAGCAACGGGACTACTGCAACAATCGATAACAAGGAGCGACATCCAGAGAAGCATTCACAAAAAAAattccagaacagtgtcaAAACGCAGTTCAGCGTGCCAGGGAGTGAAAAACCCTTCAAGTGCGCCCACTGTCCCAAGGACTTTGCCACGAGCAGCAATCTGAAGGTTCATCTCACGCGCACACACTCTGGAGATCGCGAGCGTCCTTTTCTGTGCACCACCTGCCCCAAGTCCTTTGCCACCAACGACAACCTGCAGAAGCACATACGGCGGCACTCAAGTGAACGCACTTTAAATTGTCCACACTGCCCGAAGGCGTTTGCCACCAAGGATAATCTGCAGAAGCACATACGGCGGCATTCGAGCGAACGCACCCTGAACTGCCCGCATTGTCCCAAGGCATTTGCGACAAATGACAATCTGCAGAAGCACATACGAAGGCACTCGAGTGAACGCACACTAAATTGTCCACACTGCCCGAAGGCGTTTGCGACAAACGATAATCTCCAGCGACACATACGCGGGCATACGGGTGAACGTCCGTTCAAGTGTCCCTACTGCCCGAAACCCTTTGCCCAAAACAGAGATCTCAAAGCGCACATCCTCGAGCATACTGGGGAGAAGCCCTACAAATGTCCACACTGCCCGAAAGCCTGTGTGCGCAGCGAGGGCTTAAAGAAGCATATACTGCGTCTGCACAAGGACATCGAACCGGAGCAACGACTGACGGCAACTAATGCGACGACCAAGCAATGGCAGCCGGGCGACAAGTCCTTCATCAACGATACAAACGGCAGAGTCTTTACTCTCTTTAAATACGATCTGAATAAACACACGCGAATGCCCACCGGTGAGGCGTAA
- Protein Sequence
- MEQTIDVGCVKEEHCEAMCNMFKTQDWQLTMRHRDLGLVKIEQDMSFVWQSNGTTATIDNKERHPEKHSQKKFQNSVKTQFSVPGSEKPFKCAHCPKDFATSSNLKVHLTRTHSGDRERPFLCTTCPKSFATNDNLQKHIRRHSSERTLNCPHCPKAFATKDNLQKHIRRHSSERTLNCPHCPKAFATNDNLQKHIRRHSSERTLNCPHCPKAFATNDNLQRHIRGHTGERPFKCPYCPKPFAQNRDLKAHILEHTGEKPYKCPHCPKACVRSEGLKKHILRLHKDIEPEQRLTATNATTKQWQPGDKSFINDTNGRVFTLFKYDLNKHTRMPTGEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00544875;
- 90% Identity
- iTF_01325792;
- 80% Identity
- iTF_00538364;