Dmac015086.1
Basic Information
- Insect
- Drosophila macrospina
- Gene Symbol
- Lrrfip1
- Assembly
- GCA_035042075.1
- Location
- JAWNLW010000594.1:113394-117549[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-31 8.9e-27 94.1 7.2 1 95 3 91 3 96 0.88
Sequence Information
- Coding Sequence
- ATGCAGGCCGAAGCGCGTCTTGCAGCTCGTCGTCAGGCCCGTGTTGAAGCTCGTGAAATACGCATGCGAGAGCTTGAGCGTCAACAAAAAGAACAGGAACAAAATGCAGACCGTGTGTTTGATATGCAAAATATCAATGTCAATGTAATTCATGATACACACTCTATACGTCTGGGATACGGTGGTCTTCTTAACTTGCGCCGTAGTAGTGAGGATTCATTAGAGGACGAAGGGCGCAGCATGCGTGACATAAAGCAGGAACTTAAGAAACTGCGTAACATATTGACATCCGAGGATGTTATGCTTTCATACCATGACATTAAGAAGCTGTTTGTTCTACCGACTTACGCTTCGGGGTATTGTAATGGAGCAGTGCTTTCCCAACAGCGCTCCATCGCAATATTATCTCTAGGACATCGAAATGCCCAGAAGTAA
- Protein Sequence
- MQAEARLAARRQARVEAREIRMRELERQQKEQEQNADRVFDMQNINVNVIHDTHSIRLGYGGLLNLRRSSEDSLEDEGRSMRDIKQELKKLRNILTSEDVMLSYHDIKKLFVLPTYASGYCNGAVLSQQRSIAILSLGHRNAQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -