Dlut013975.1
Basic Information
- Insect
- Drosophila lutescens
- Gene Symbol
- ZNF212
- Assembly
- GCA_037075285.1
- Location
- JBAMCF010000770.1:1920115-1922058[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.93 75 4.4 2.0 1 20 120 139 120 140 0.92 2 10 0.0023 0.19 12.6 0.6 2 23 182 203 181 203 0.97 3 10 0.00024 0.019 15.7 0.9 1 23 229 250 229 250 0.98 4 10 0.0013 0.1 13.4 0.4 2 23 258 279 257 279 0.96 5 10 2.9e-05 0.0023 18.5 0.6 1 23 304 326 304 326 0.98 6 10 1.3e-07 1e-05 25.9 0.5 1 23 332 354 332 354 0.98 7 10 0.0011 0.092 13.5 5.5 1 23 360 382 360 382 0.98 8 10 2.2e-05 0.0018 18.9 0.4 1 23 388 410 388 410 0.97 9 10 2.1e-05 0.0017 19.0 0.2 1 23 414 436 414 436 0.98 10 10 0.00018 0.014 16.1 0.7 1 23 466 489 466 489 0.97
Sequence Information
- Coding Sequence
- ATGTCCTTGTCCAACCAGGCCGAGGAGACTAGTCCGGACGCCCACGTGGAGGACGCAGTTGCAGCCTTGTCCGGGGATGCAGCGCCCCAGGAGTTCCTCTACTGCGAGAGTTGCGGCAACGTCTACGGGGACAGCGAGGCGTACGCCAGGGATCACAATGGGCAGCCCGGCTCCTGCGGCGGCGCTAGCGAAGGATTGGCGTTCGTAGACGAATCTGCAAGAGACTACATTTTGGAGGAGGTCAGCGAGGAAGATATCGTCGAGCCGGATGTGCCGCTCTGGGAGCTGGTGGAGGAAGTTCCGTCCAACATCAGGGCGGAGCAGAATGAGGGCGATGAGCTCAGCCAGTCCGACCGCTACTTCTGCTACGACTGCCACAGCATTTTCGAGAACCGCAGCAGTGCCGAGGAGCATGTTTGTCCGCGAGCGGATTCCGGTCCAGGTTCCAGCCAGCAGGTCGAGGCGGAGGCCCGACCACCCTATCGTCGAAAGCTGGCCAGTGTTAGTGCGAGGAGAGGACCAAAAGATGCCGTCTCCGAAATTACCTGTGGGATCTGCAATACCGTTTTCAGTTCCGATAAGTTCCTAAAGTTTCACATGCGCATCCACGACAGTCGCGCGTCCAAGAGCATCCAGGAGGCCCTTCCTGTGGGCGCCCATCAGCAGTACAGCGAGCTAAATCAGTTCTATTGCGAAATCTGCAATAAGAGCTTCGATGAGAACCTCTTGACGGTACACAAACAGATGCACCAGCAGTCTACCAACGAGATTATGTGCAGCATATGCAACAGAAAGTTCGAAGACGACGTTACCTACCAGATGCACCAAAAAATCCACGATAAGCCTCGCGAGACTGACGCATCCAGCAGATTGAGCCAGCGTCCTGGCGGCGACAAGGAGAAACCCGGCTTTCCCTGTCAGTACTGCGATCGGGTGTTCACCCGTCCCTTCGAGAAGGTCAAGCACGAACGGGTCCACACTGGTGAGAAGCCCTACGCCTGCGAGGTCTGCGGCAAGACCTTTCGCGTGTCCTATTCGCTGACCCTTCATCTGCGCACCCACACCAACATTCGTCCGTATGTGTGCACGGTGTGCAACAAGCGGTTTAAATCGCATCAAGTGTACTCTCATCACCTGCGCATCCACAGTTCGGAGCGGCAGTTCGCCTGCGACGCGTGCCCCAAGACGTTTCGCACCTCTGTGCAGCTGTACGCCCACAAAAACACCCACACCAAGCCGTACCAGTGCGCCGTGTGCAACCGCCCCTTCTCCTCGTTGTACGCTGTCAGGAATCACATGGTGACGCACAAGGACGACAAAGATAAAGAAAGTGCCGGCGATAGTACGCCGAACTCTAAGAACGGAAAGCATGCCAAGGGCCAGGCAGCTGGGAAATTCTATTGCAGCACTTGTGGAGCTGAGTATGCGCGTCTCTTCTCCCTGCGCCTGCACATGAAGTCGAGCCACGGCGTCGTGGAGGATGGGGCCTTGCAGCAAGCGGATCCCTCATCCACAGCTGAAGAGGTGCAAGCCGCCGAAACCGATGACTCCGAGACAGCGGTGCTGATAGCAGCTGCCGAGGCAGATGCCGCTTATATTAACGCGGTGGTGAACGACGTCGACGTCGTGGGGTCCGTGCCCACCTACGAGGAGTGCGTCGAGTTCGACGTGGACAATTTCCACAGCGAGGAGATTATCACGGATTGGCTTAAGTAA
- Protein Sequence
- MSLSNQAEETSPDAHVEDAVAALSGDAAPQEFLYCESCGNVYGDSEAYARDHNGQPGSCGGASEGLAFVDESARDYILEEVSEEDIVEPDVPLWELVEEVPSNIRAEQNEGDELSQSDRYFCYDCHSIFENRSSAEEHVCPRADSGPGSSQQVEAEARPPYRRKLASVSARRGPKDAVSEITCGICNTVFSSDKFLKFHMRIHDSRASKSIQEALPVGAHQQYSELNQFYCEICNKSFDENLLTVHKQMHQQSTNEIMCSICNRKFEDDVTYQMHQKIHDKPRETDASSRLSQRPGGDKEKPGFPCQYCDRVFTRPFEKVKHERVHTGEKPYACEVCGKTFRVSYSLTLHLRTHTNIRPYVCTVCNKRFKSHQVYSHHLRIHSSERQFACDACPKTFRTSVQLYAHKNTHTKPYQCAVCNRPFSSLYAVRNHMVTHKDDKDKESAGDSTPNSKNGKHAKGQAAGKFYCSTCGAEYARLFSLRLHMKSSHGVVEDGALQQADPSSTAEEVQAAETDDSETAVLIAAAEADAAYINAVVNDVDVVGSVPTYEECVEFDVDNFHSEEIITDWLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00548230;
- 90% Identity
- iTF_00578706;
- 80% Identity
- -