Dlow006544.1
Basic Information
- Insect
- Drosophila lowei
- Gene Symbol
- Trerf1
- Assembly
- GCA_008121275.1
- Location
- CM017777.1:45358140-45367822[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-09 2.5e-06 27.3 0.1 2 45 1725 1768 1724 1769 0.94
Sequence Information
- Coding Sequence
- ATGTGCAGCGCCTCTGTGGGCTCTGAGGGATCCGTAACATTGCAACTGAGAGATGCTAGCGCCTTGGAGGCAGCAAcatcggcagcaacaacagcaacagcagcagcgagcacGAAATCTGCCACATCAACAGGGGGGAATGGCGTTACAACGCTTGCCACGTCCTCAACGTCGGCATTAGAGAATGCTTTGACGATCGGGTATCCGGATCCGGAAATGCTGGCAGATGTCTTGGGCAGCATACAGACAGCCTCTCTCAAGAACAACCACACAATCACAGCCACAACTTTAAGAAATAGCTCAACGAAATCGGCTAATGGCAATCATCTGAGTAATCCCAACAAGATAACCATAACTAGGCGCAGTGTGCAGTCCGTCAGCACCTCCACGAACACAACCACAATCGGTGgcagtcagagccagagccacagccacagccacagtcacagcaAAACAAATACCAGCTACATTAAGAACTGTCTgatccgcagcagcagctgcagcaacacGGTCACCAATGTCACGACGCTGGCGCAGATtatgagcaacagcagcaccagcagcgcATCCAGTCTCCTCAAtcagcacaacaacaacagcaactgcagcaacagcagcaacttCAGCACCGCCTCCTCCgtgggcagcagcatcagcatcggcagcagcagcaacagcagcagcaacagcaacagtaacgacagcaacagcagcaccggCGGCGGGCACAGCCTGTCCTTCAAGAGCAACGGTAGACATGTTCCTGGCAACAGTGGGTCAGTGGGTGGTGCAGGCACAGTAGCCACAAGCACAAATACCCCTGGCATTGGTGGCATCATCAGCATCGAAGCACCGCGCAAGAACCGCCCCAAACTATCCTCGCCAACGCGACACGGACCACAGCAGTGTCAGATTTGTTGCAAGATCTTTGGAAATGCCTCGGCGCTGGCCAAGCACAAACTGACGCACAGCGACGAACGGAAATATATTTGTGTGCTCTGCTCGAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACTCATCGGAACAAGAAGCCTTACGAATGTAAGGCGGATGGCTGCGGCAAGTCCTACTGCGATGCCCGCTCCCTGCGCAGGCACTCGGAGAACCATCATGCGGGGGCAGTCACTCCCACCACCAGTCAATCGCTCTCCCCCACAGCCAGCTCCAGCGGGGCGAGCATTAGCAGCAGCGTCGGAGTGGCCACCAGTTCGCTGAGCCTCTCGCCGTCTACGGCCAGCGGGGATGCGAGCTCCCCGGACGGTGCCACGTGCATACGAACGTACATTTCCACGGGCAGCTCCTTGGTGGATGCCGCCACGGGTATCGCTCTCTCGGACGAACAGATCAAGGCCATGAACTTGCCCATCAAGACGGGCATGACCCTGTTGTCGCCCACCACCTCCACATCCTCCAATGCATCCTCCACggcctcgtcgtcgtcgctgtcgtcCTCCCCGTCGACCATCGCGTCCTCGGTGGGCAATGGCACCGTGATAGCCAGCTCACCCACCATCACGCTCAGCGATGGCATCAGCCTCGAGGGCGAGGGCCTGACCCGGGAGCAACTCGATCTCATCAGCAAGATCATGCAACAGACGAAGCAGACGAGCGCCCAGGTGACCGTCTCCTCGCCCACCAGCGTCAGCTCCTACAAAATCAACACGAACTCGGCCCCGTCATCGTCCAGGCCCCGTACCTGGAACATGCAATTGCTCAACAGCGCCCAAAATGTGACGCTTCATGTGGAAGATGGCACCGATCTGGTGGCTTCTTCATCGAACTCCCCCGTAGAAATCAAGGAGGAAGACgtgggccagcagcagcaacttgtGGCCACCGCCAATCCCCACCTGCTCGTGAAGCTCGACAAGCCCGTCGAGTGCAATCTCTGTCACCGTAAGTTCAAAAACATACCCGCCCTCAATGGGCACATGCGCCTGCATGGCGGCTACTTCAAGAAGGATCCGGAAACGAAGCGCAGCGAGAAGAAGGACTCCAGTGGTCCCCCTCTGCAGACGGCCAGCATCGGAGTGCGTGCCCTCATCGAGGAGAAGATCATCAGCAAGCGCAAGGACATGAATAAGGGCGCCTTTGTGGTACCCGCACCAccgcacagcagcagcagcagtagcagcagcaccaccaccacccttCGACGATCGATCAGCGACCTGGAGAGCTTTCTGAATCCGAAGAGCAGCTCTAGTGCATTCACCCAAACGCTCTCCACCAGCACGGCCACCACCACAGCGGTGCTGCCGGCGGCCACAACAATCAAGAGCAGCAACGGCCTCAGCATACAGCAGATCGGACTGCCCCAGAGCATCGAGATCTTCAGTGGGGGCCAGAAGCAGTCGAAGACCCTCAGTCTTGGCAGCGGCACCAATACGATCACAATCACCACCAACAACGTGCCCACAACCACGACGATGAGTGCGCTGACCGCTCTGAAGGCAGGCGGCACCATTAGCGGCATATCCGCAGCCACCAACACGGATCCcaaggactccaccctgaTCGAGCTGCTGAAGCGCGGCACTCGCATTGCCGTCACCTCCAAGAAGGCCCAATCCCACACAACCCACTGCGGCACGAATATGCTGATGACTACCCAAAATGGCACAGGATCGGGCCTGGGAGCAATCACAGAGCTCACCACCATCGGGGGGAGTAGTCTCCAGACGATCGGCCGGCAGATCATCACCAACAACAATCGCACGGTGATCATACCTTCCGATGTCCAGGTGGTGGCCACCAAGAGCAAGCTGAGCAGCCTGTCCAGTCTCACGGGAAGTCTGATTAagaccagcagcagcgtgaATACATCCTGTTCGAGCGGCAGCATCTCCTTGGCCGATGACACGGCCCTCTCGCTGAACATCGCCCCCAGTCAGGAGGGACACGTTGGCAGCGGGACCGGGGGAGTGATCACGAGCGGAGGAGGCGGAGTGTACACCGTTACCTATACCAGCGACGGCACCGATCTGTTCGACGATTCAGAGGTGTACAACGTTTCCGACACGGAAATGCTGCTCCAGACAGTCGACTCCATGGAGCTGCTGAACGACGAAGAGGACGTGGCTCAGATCAAGAGCGAACATTCCGAGGACTTTGCCCTGCTCAGCGAGGCCGGCGATAGTGTGCACACCCAGCTGGTGAAGCTGGAGCCGGACACGGGCACCGCCAACGGCTGCTCCAGCAGCAATAATACCACCACCACCggcaacaccaccaccaccacgacaCCGCTGCCCACCTTCCAGCAATTCCATTCCAAGGAGCTCATCATGCAGAACAGCTCCCAGATCCAGGCGATAGCCAGCATGCGCGGCAGCATCCTGccctctccactccactcgccGCTGGCCTATCCGACGCCACCCTCCAGCCACGAGAACATGGCCCAGTCGTCGCCTTTCATTGAGGATGCGGCCGCCCAGTTCGTGGACGCCAGCAACACCTTCTTCGGGGACAAGACGGACTTCTCGCACATCTACTTCAAGACGGACGATGGCCAGCCCATCGAGCAGCTGAACGAGAACGACAACGAGAAGATCCTGAAGCTCAAGTCGGTGCTGGAGGAGAGCAGCTTCGATCCCTCCATCAAGGTGGAGGACTTGCTGAATGGCACGGAAGACGACACCGAGTGCGACCTGCGCGAGTTTGCCGAAACGAATCTCTCGTTCCTCGACGAGGACCAGGAGTTTCTCAATGATTCACGCAATGCCACCTCCCCGCTGTCGGAGTCCTTCTTCACCAGCGGCATTGGCTCGGCGGAGGATGTGAAGCAGGTGCTCCGAGAAGTGCTGCCCGACGAGAacatgcagctgcagctgacCAGCGAGGAGCAGGGGGAGAACATCATTGATCTCTACTACTTGCCGGGCCTGGGACTGCAGTCCCAGATGATGAACAACTCGGAGGACCCGATGCTCTCCTCCTCGCCACGCGAATTCGGTCTGCAGCGTCAGATGGGACAGATCCAGGCAACGACTATGCCCCAACCGATGGAGCAGCAACTCCAGCAAACCACGGCCATCTATCAGCAGCAAGAGTCAGacctgcaacagcagccacagcagcagcaacagatacagctacagctgctgcaacagcaacagcagtcgcagcagATCCTGGTCCCTCAGCAATCGCTGGGTCAACCGGTGTCCATGCAGGCACAGGaaggccagcagcagacagaATTCATGCTGCCCCTGGTGGGGGGTCATGGCTTTGCGGCGGTTACCAGCCAGAGCCAGTTCCTGGATACCACACAGAGCACCATGACACTGCAGCCTCTCAACAGCCTGCTCCAGCCCCTGCTGTATGGCGGTGGCGGCTCTAATGGCACACCCACCACAAACAATGCGGCAGTGCTCACCACCGACTGCCAGATGAATCCCAATCAAAGTCAGAACACCGCTCTCGATGCCAGCCTGCTCTTTCCCTGCAGCGTCACAGCCGCAGCCTCAGCCACTAAtaacaatggcaatggaaagACCCTGCTGTCCGCCCTGGCCACATCGGTGCCGACACCTGTGGTAATTGCCACCCCGCCCAGCGTGTCCAATCTGCAGCCGCTGTCGAATCAAACCAATTCCATACTGAAGCGCCGCCTGCGCTCGAACGCTCCCCAGGGGACGCAGAAGTTCTCCAAGTTCCACACCCTGTCGCCGCATCGCTCCAAGCTGCGTAAACCCTCCCGCACGCACTATACGCCGGCCCCCATCCTCAATCCGGACCGCAAGGGAACAGGTCTGTATTGCATTGTGCGGAAACAGCAGGGCCAGGGCATATTCGATGCCTTCGAAGATGACTTTGGCGATCCGGTGGGCCTGGTCGACTTCTCGGACGAGTCGAAGGTGAATCTCGGTTCGGCATATCAGGCCCAGATACCCTGCTGCAAGCCGTTGGAGGAGGCCGCCAGTGATCCCATGGCTGCGGACATGATGTGGAATCCCGAGGTGCAGGAGGACGAGAAAATTCTGATGCGTTACATAGATCTCAGCAAATCATCGGCCGTGCCAATGGGCAGTCATTCCGAGGAGGTGGCCCTCCACACGCTGCTCAAGTCCCAGGGCAactcggcggcggcggtgctGACCCTCCTCCAGACGCAGTCCAGTGCATTTCAAATGAAGTGGACCGCCTTCGAGCTGGAGCAGTTCCTGCGTGGTCTGGAGAAGCACGGCAAGGACTTTGGCAAGATTGCCAGCGAGCTTCGCACCAAGTCCTCGGGGGAGTGTGTGCAAATGTATTATTTCTGGAAGAAGCTCTGCGTGGACTATAAGGTATCGCACTTGAAGATGGAGCCAGTGACCCACATCGTGCCCGCCGTGGAGAAGCCCTATGTTTGCGAGATTGCCGACTGTTCAGCGAGCTTCAGTTCGAAGGCGGCGCTGCACGGCCATGTTCGCATACACGCTTTTGGCCGTaatgccagcagcaacaacagcaacaacaacaacagcagcaacagcaacagcaacaacaacagcagcaacagtacGCAGCATGCCACGGCAAATAATGCCGCAAGCAGCAACCAACAAAATTCCAACAGCTACGCATGCGCGCCCCTGACAACCAACAGCAGCACTAATCCATCAAGCAatgcaacatcagcaacaacaagtgcAACGAATCTCAGTGGCAACAGTGCCACTATCAATGGCAATGGCCACCCAACCACAACGACAGCCACGTCCTCCTCGACTCTGACAGCCTCCAAAGTGGAAACGGGCAACACGAACGCCACAGCCCCGCCCACTGTCAAGGAGGGGGAATTTCCCTGCAAGGTGTGCGGCAAAGTCTTCAATAAGGTCAAGAGTCGCAGTGCTCATATGAAGACGCATCGGGTTCAGGAATCGGATCCGTCGCCCAAAAACcaacatcatcagcagcaacaaaagcagcagctaAGCAGTCTAGCAAATATTATCACAGGATCAGTCactgggacagggacagggacatcgacatcgacaggAACGGCATCGGGATTAGCATCAACAGCCGCCTCATCAGCGATCGCAACGTCCTCTTAG
- Protein Sequence
- MCSASVGSEGSVTLQLRDASALEAATSAATTATAAASTKSATSTGGNGVTTLATSSTSALENALTIGYPDPEMLADVLGSIQTASLKNNHTITATTLRNSSTKSANGNHLSNPNKITITRRSVQSVSTSTNTTTIGGSQSQSHSHSHSHSKTNTSYIKNCLIRSSSCSNTVTNVTTLAQIMSNSSTSSASSLLNQHNNNSNCSNSSNFSTASSVGSSISIGSSSNSSSNSNSNDSNSSTGGGHSLSFKSNGRHVPGNSGSVGGAGTVATSTNTPGIGGIISIEAPRKNRPKLSSPTRHGPQQCQICCKIFGNASALAKHKLTHSDERKYICVLCSKAFKRQDHLNGHMMTHRNKKPYECKADGCGKSYCDARSLRRHSENHHAGAVTPTTSQSLSPTASSSGASISSSVGVATSSLSLSPSTASGDASSPDGATCIRTYISTGSSLVDAATGIALSDEQIKAMNLPIKTGMTLLSPTTSTSSNASSTASSSSLSSSPSTIASSVGNGTVIASSPTITLSDGISLEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVSSYKINTNSAPSSSRPRTWNMQLLNSAQNVTLHVEDGTDLVASSSNSPVEIKEEDVGQQQQLVATANPHLLVKLDKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETKRSEKKDSSGPPLQTASIGVRALIEEKIISKRKDMNKGAFVVPAPPHSSSSSSSSTTTTLRRSISDLESFLNPKSSSSAFTQTLSTSTATTTAVLPAATTIKSSNGLSIQQIGLPQSIEIFSGGQKQSKTLSLGSGTNTITITTNNVPTTTTMSALTALKAGGTISGISAATNTDPKDSTLIELLKRGTRIAVTSKKAQSHTTHCGTNMLMTTQNGTGSGLGAITELTTIGGSSLQTIGRQIITNNNRTVIIPSDVQVVATKSKLSSLSSLTGSLIKTSSSVNTSCSSGSISLADDTALSLNIAPSQEGHVGSGTGGVITSGGGGVYTVTYTSDGTDLFDDSEVYNVSDTEMLLQTVDSMELLNDEEDVAQIKSEHSEDFALLSEAGDSVHTQLVKLEPDTGTANGCSSSNNTTTTGNTTTTTTPLPTFQQFHSKELIMQNSSQIQAIASMRGSILPSPLHSPLAYPTPPSSHENMAQSSPFIEDAAAQFVDASNTFFGDKTDFSHIYFKTDDGQPIEQLNENDNEKILKLKSVLEESSFDPSIKVEDLLNGTEDDTECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEDVKQVLREVLPDENMQLQLTSEEQGENIIDLYYLPGLGLQSQMMNNSEDPMLSSSPREFGLQRQMGQIQATTMPQPMEQQLQQTTAIYQQQESDLQQQPQQQQQIQLQLLQQQQQSQQILVPQQSLGQPVSMQAQEGQQQTEFMLPLVGGHGFAAVTSQSQFLDTTQSTMTLQPLNSLLQPLLYGGGGSNGTPTTNNAAVLTTDCQMNPNQSQNTALDASLLFPCSVTAAASATNNNGNGKTLLSALATSVPTPVVIATPPSVSNLQPLSNQTNSILKRRLRSNAPQGTQKFSKFHTLSPHRSKLRKPSRTHYTPAPILNPDRKGTGLYCIVRKQQGQGIFDAFEDDFGDPVGLVDFSDESKVNLGSAYQAQIPCCKPLEEAASDPMAADMMWNPEVQEDEKILMRYIDLSKSSAVPMGSHSEEVALHTLLKSQGNSAAAVLTLLQTQSSAFQMKWTAFELEQFLRGLEKHGKDFGKIASELRTKSSGECVQMYYFWKKLCVDYKVSHLKMEPVTHIVPAVEKPYVCEIADCSASFSSKAALHGHVRIHAFGRNASSNNSNNNNSSNSNSNNNSSNSTQHATANNAASSNQQNSNSYACAPLTTNSSTNPSSNATSATTSATNLSGNSATINGNGHPTTTTATSSSTLTASKVETGNTNATAPPTVKEGEFPCKVCGKVFNKVKSRSAHMKTHRVQESDPSPKNQHHQQQQKQQLSSLANIITGSVTGTGTGTSTSTGTASGLASTAASSAIATSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00487234;
- 90% Identity
- iTF_00580650;
- 80% Identity
- iTF_00536297;