Basic Information

Insect: Drosophila longiperda
Gene Symbol: hb
Assembly: GCA_035042125.1
Location: JAWNLV010000134.1:861922-864462[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00087 0.059 13.8 0.2 1 23 282 304 282 304 0.99

2 6 0.0071 0.47 11.0 4.5 2 23 312 333 311 333 0.97

3 6 0.0003 0.02 15.3 5.0 1 23 339 361 339 361 0.98

4 6 0.04 2.7 8.6 5.3 1 23 367 391 367 391 0.93

5 6 0.00024 0.016 15.6 0.4 1 23 793 815 793 815 0.96

6 6 0.0035 0.24 11.9 0.2 1 22 821 842 821 845 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00087	0.059	13.8	0.2	1	23	282	304	282	304	0.99
2	6	0.0071	0.47	11.0	4.5	2	23	312	333	311	333	0.97
3	6	0.0003	0.02	15.3	5.0	1	23	339	361	339	361	0.98
4	6	0.04	2.7	8.6	5.3	1	23	367	391	367	391	0.93
5	6	0.00024	0.016	15.6	0.4	1	23	793	815	793	815	0.96
6	6	0.0035	0.24	11.9	0.2	1	22	821	842	821	845	0.91

Sequence Information

Coding Sequence: atgCAGAACTGGGAGACGAGCACCGCAGCGCCCAATTATGAGCAGCACAATGCGTGGTACAGCAGCATGTTTGCCGCCAACATCAAGCAGGAGCCCATctcgcatcatcatcatcatcatcatcatgccCATCACAGTCATCATCAGCATTCGcatgacagcaacagcaatagcaatgcAAGCAGTCCACATCAATCGCCGTCGCCCTCACCCAATCCGCCCAGCAGCACCAATCTGCAACTGGAGCAATACctcaagcaacagcagcaacaacaacagcagcagcaacagcaacagcaacaacaacctaTGGATACACTCTGTGCTGGTGCCATGACTCCATCGCCCAGTAACAATGATCAGAATAGCTTGCAACACTTTGATGCcacactgcagcagcaactcttgcagcagcaacagtatcAACAACACTTTcaggcagcgcagcagcaacagcagcaacatcatcatcttACACTGGGCGGCTTCAATCCGTTAACGCCACCCGGATTGCCCAATCCCATGCAGCACTATTATGCCAGCAATATGCGTCCCAGtcccacagcaacaacaacagcaacaacaactgctgctgctgctgcaacgacaacagcagcgacaattgCACTGCAATCCAATGACAAATTACAGGCACTAACTCCACCCATGGATGTAACGCCTCCAAAGTCACCGGCCAAGTCTCAGCAATCCTGTGCGGAGCCAGAGAAGGAGCATGATCTAATGTCCAATTCAAGTGAGGATATGAAATATATGGCCGAGTCCGAGGATGATGACACCAACATACGGATGCCCATCTACAATTCGCATGGCAAGATGAAGAACTACAAATGCAAGACATGCGGCGTGGTGGCCATCACCAAGGTGGACTTCTGGGCGCACACACGCAACCACATGAAACCGGACAAGATACTGCAGTGCTCCAAGTGTCCGTTTGTCACCGAGTTCAAGCACCATCTGGAGTACCACATCCGCAAGCACAAGAACCAGAAACCGTTCCAATGCGACAAGTGCAGTTATACTTGCGTCAACAAATCGATGCTCAACTCGCACCGCAAGTCGCACAGTTCGGTGTATCAGTATCGGTGTGCCGATTGTGATTATGCCACCAAATATTGCCACAGTTTCAAGTTGCATCTGCGCAAGTATGGCCACAAGCCCGGCATGGTTTTGGACGAGGATGGCACACCCAATCCCTCGCTAGTCATCGATGTCTATGGCACCCGGCGTGGCCCCAAAAGCAAATCACTCTTGGGCAACGGCAGCTCCAGCAACTGTTCCAGTTCCAGCAGCAATAAGCGCAGCAGTGCAGCAGCTACCTCAGCTGTGCAGCATCAGCAAGCAGGTAttccaccagcagcaacatctcAGTTATCGGCTGCTCTACAAGGATTCCCAATGCCAGGTGTGGCTGCAACAAcggcagttgcaacaacagtgCCACCTGTGTCGCCACCGTCGCCAGCGAAGAGTGTTGCCAGCAGCGTTGAGCAGGCGCCCAGTTTGTCGAACGCTTTGCTGCCACCTTTGGCCAGTTTGTTGCAACAGAATCATCGCAACATGGCCTTCTTTCCCTACTGGAATCTCAATCTGCAAATGCTTGCCGCCCAACAGCAGGCCGCAGTTCTTGCCCAGCTATCGCCGCGCATGCGTgaccagctgcaacagcaacaacatcagcagcagcagcaacaacatcagcaacagcagcagcaacatctgcAACAGTTGTCTGCACACAGCGAcaacgaggaggaggagcacgACCCGGTGGAGGAGGAGGTCGATGATGATTTTGAGCGCAAGTCGGTGGATTCAGCCATGGATCTGTCCCAGGGCACTCCGATCAAGGAggagccacagcaacaacagcgcacACAGAACAGTCACATGGCCATGAATTTAAAGATCAAGGACGAGGACACACCgctgatcagcagcagcagcgtatCTCGACGCAAGGGCCGTGTGCTCAAGTTGGACAcgttgctgcagctgaagtCCGCTGCGATGTCTACGCCGGAGCAACAGCTCAAGTTGCCAGCTAGTTCGCTGCCCACAGCCTCATCTCCGATCTCTGGCAGCAGTGCCAACAAACAGCTGGCGGATGACCCGTGCTCCGGTGCCAGCTCAGCGGATGAGTCCATGGAAACTATGGGTCATGTGCCACAGGTCAATACCAGTGCCAGTTCAACGGCCTCCAGCTCCGGCAACAGCTCgaatgccagcagcagcagcaatccaaTTCCAGCTGCTACAGTTGCCGTCTCCACCTCAGCCTCTGCGTCCGCGTCTGCATCTGCCTCGGCGTCCGTGTCCAGCTCATCCtcgggcaacagcagcagctcaccGGCTATTTATGAGTGCAAGTATTGTGATATTTACTTCAAGGACGCCGTGCTCTATACCATCCACATGGGCTACCACAGCTGCGACGATGTCTTCAAGTGCAACATGTGCGGCGAGAAGTGCGACGGACCCGTCGGACTCTTCGTCCACATGGCACGCAATGCCCACTCCtaa
Protein Sequence: MQNWETSTAAPNYEQHNAWYSSMFAANIKQEPISHHHHHHHHAHHSHHQHSHDSNSNSNASSPHQSPSPSPNPPSSTNLQLEQYLKQQQQQQQQQQQQQQQQPMDTLCAGAMTPSPSNNDQNSLQHFDATLQQQLLQQQQYQQHFQAAQQQQQQHHHLTLGGFNPLTPPGLPNPMQHYYASNMRPSPTATTTATTTAAAAATTTAATIALQSNDKLQALTPPMDVTPPKSPAKSQQSCAEPEKEHDLMSNSSEDMKYMAESEDDDTNIRMPIYNSHGKMKNYKCKTCGVVAITKVDFWAHTRNHMKPDKILQCSKCPFVTEFKHHLEYHIRKHKNQKPFQCDKCSYTCVNKSMLNSHRKSHSSVYQYRCADCDYATKYCHSFKLHLRKYGHKPGMVLDEDGTPNPSLVIDVYGTRRGPKSKSLLGNGSSSNCSSSSSNKRSSAAATSAVQHQQAGIPPAATSQLSAALQGFPMPGVAATTAVATTVPPVSPPSPAKSVASSVEQAPSLSNALLPPLASLLQQNHRNMAFFPYWNLNLQMLAAQQQAAVLAQLSPRMRDQLQQQQHQQQQQQHQQQQQQHLQQLSAHSDNEEEEHDPVEEEVDDDFERKSVDSAMDLSQGTPIKEEPQQQQRTQNSHMAMNLKIKDEDTPLISSSSVSRRKGRVLKLDTLLQLKSAAMSTPEQQLKLPASSLPTASSPISGSSANKQLADDPCSGASSADESMETMGHVPQVNTSASSTASSSGNSSNASSSSNPIPAATVAVSTSASASASASASASVSSSSSGNSSSSPAIYECKYCDIYFKDAVLYTIHMGYHSCDDVFKCNMCGEKCDGPVGLFVHMARNAHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00547606;
90% Identity: iTF_00570685;
80% Identity: -