Basic Information

Insect: Drosophila longiperda
Gene Symbol: ken1
Assembly: GCA_035042125.1
Location: JAWNLV010000172.1:9945745-9948159[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.16 10 6.8 5.6 3 23 257 277 256 277 0.97

2 12 0.0001 0.0071 16.7 0.4 1 23 283 308 283 308 0.95

3 12 0.0013 0.086 13.3 0.7 1 23 315 340 315 340 0.93

4 12 0.0006 0.04 14.4 5.1 1 23 350 372 350 372 0.97

5 12 0.0002 0.013 15.9 1.8 2 23 380 401 379 401 0.96

6 12 0.0027 0.18 12.3 0.1 1 23 407 429 407 429 0.98

7 12 0.032 2.1 8.9 1.4 1 23 435 458 435 458 0.97

8 12 0.0048 0.32 11.5 3.2 1 23 464 486 464 486 0.96

9 12 0.00013 0.009 16.4 1.2 2 23 493 514 492 514 0.98

10 12 0.00019 0.013 15.9 0.8 1 23 605 628 605 628 0.95

11 12 0.12 8.3 7.1 1.5 1 21 634 653 634 656 0.72

12 12 8.4e-06 0.00057 20.2 2.3 1 23 662 685 662 685 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.16	10	6.8	5.6	3	23	257	277	256	277	0.97
2	12	0.0001	0.0071	16.7	0.4	1	23	283	308	283	308	0.95
3	12	0.0013	0.086	13.3	0.7	1	23	315	340	315	340	0.93
4	12	0.0006	0.04	14.4	5.1	1	23	350	372	350	372	0.97
5	12	0.0002	0.013	15.9	1.8	2	23	380	401	379	401	0.96
6	12	0.0027	0.18	12.3	0.1	1	23	407	429	407	429	0.98
7	12	0.032	2.1	8.9	1.4	1	23	435	458	435	458	0.97
8	12	0.0048	0.32	11.5	3.2	1	23	464	486	464	486	0.96
9	12	0.00013	0.009	16.4	1.2	2	23	493	514	492	514	0.98
10	12	0.00019	0.013	15.9	0.8	1	23	605	628	605	628	0.95
11	12	0.12	8.3	7.1	1.5	1	21	634	653	634	656	0.72
12	12	8.4e-06	0.00057	20.2	2.3	1	23	662	685	662	685	0.98

Sequence Information

Coding Sequence: ATGAATGAGGGGAGTGAATACTCCATTCATTCAATATGCCGAATCTGCTTAAATCACCTTCGAAATGATCCGGCGTACGACCTATTTCTCGTTCCGGGTCTGGCCaaaaaactgtgtgtgtgtacttcaCTCTCAGTGGAACAGCACGATGGCTTCCCGAAAAACCTTTGCACCAATTGCTACACCAAGCTGAACGACTTGCATGGATTCCAGAAGCTTTGCGTGGACTCTGTGCAAAAGTTTCAGGAAATGGTCGCTAGCAATTATTTTGTACCCGTTGCTCGTGATATTGACAAAGTTGATATGCTGACTGGGGCACCGATTGATGGGGAAGCGGATGATGATAACATAAACTTCGATCCGCTTCTGAATACCAAAATAGAAATTGTGGAGTCTGAAGAGgatgtttttaaaatgctaGATGATGTCGATAAGGAAGCAGAGGAGGTTGAGAAGGAAGTAGAGAGGGCAAGGTATATATCCAGTGACagtgacaacgacaacgaaaaTTATATTGATGACGATGGGGACGTTGACTTTCAAGTAAATAGTAGCGACTCCGACGACGCCGTACCCTTGTCCCGCTTACGTAGTTCCACAAGGGCATCAACGACAAAGGCCAAAACGAATACTGCGGATGACGATGAAGATGATTCCTCTAGCTTTGAATGGGCTGAGAATAAAGAGGATGACATGGATAAACCCAAGCCAAAGCCAAGACGAAAACGCGCTCAAGGTCCTGCGGCACCCATCGATGGACTGGTTGACTGTCACATTTGTCATGAAAAATTCCAGAGCACCAAACTGTACGAGGAACACATGGAACATCACAACGATCAATTGCCATTTCAGTGCTCTGTTGATGACTGCAAGAAGGGTTTCACTACGGCAGGTGGTCTGCGCCTTCATATGGACCACGCCCATTCAGAATTTTCTGAAGTGCACGCATGCACGGCTGAGGGATGTGACAAGACCTTTCCTCGTTCTGTCTTGCTCACGTTCCATATGAAAAAGGTGCACAACATCATCAAGACACCGTCGCGGAATCATCCTTGCACTGAGTGCGACAAAGTCTTCCGTTGTTCAACGGCACTTAAAAAGCACATGTATAAGCACACTGGCGAGGAGAAACCAATCTCCTGTAACATATGTAACAAACGTTTTCATATAAACAGCGATCTCAGAGATCATCTCTTGCGCCATGCGGGCGTAAAGAACTATGTGTGTCCATATTGCGGAGTGGGCAAAACTACTCGTCAGGAATGGAACAAACATATATTGACCCACACAAAGGAGAAGCAGTTCCAGTGTCTCCAGTGCGATCATGCCTCGCATAACAAACAGGCACTGGCCAATCATGTCAAGGTGGTTCATATGAAGATCAAGGACTTCGCATGTCAGTATTGCGGAAAAACGTTTGGCAAGTCGTATTCGTGCAAGGTTCACGAGAGACTTCACACGGGCGAGAACTGCAGCAAGTGCAAGATCTGTGGCAAGGTTTTTCTTTTCGAGAAGGGATTGACCAAACATTTAAAGACCCATGAGAAGCGTGATAAAACACGGCCTGCTTCGGCGACTGCAGTCAAACCGAATGACGATGAAGGCGCTAAAGGCACACAGAACGCCATCCAAGAATTGACTCAGCCTGTAGACGGGAAAGTCGTTTCAGGAGTTTCCACCAAGCCGAAGACATCAAATAGAGTTGAGCGTGTGGATATATCGCAGTTAGCGGGCACCTCTGTCAATCCAATTTCATCAGTATCGGTGCCCTCGTGGTCGCCGCAAGTCAACTTCACAAAGAAGGAAGGCCAACATATTTGTCCAGGATGCGGACGTGGCTTTAATCACATTGGTAATATGAAGCTTCATTACAAGATAATACATGAGAAGGTGAAGGACTTTGCCTGTCGATTTTGCCCAAAGCGTTTTTCGAAGGCACAAATCTTAAAACATCATGAATGGGTTCACACAGGCGAGAAGCCCTACGAGTGCAAGGTATGTGGCAAACACTTCCGGCAGGAGTCAGTTATGAAAAACCATTTGAGAAGAGTTCATGAGAATGCGAAACCTGCAAAGGAGCCAAAACCACCAAAGACTGTTCTTAGGCCAACTGGACCACACGTCTTGCTTAACAAAAAACACGTCCTAAAGAATTTTGATGAGTACCAAGATCCTGCTGCAGAGCAAGCAGCTGCGACAGCTGCATTGCTTGCCCAACAGCAGGAGGAGAATGAGGCGAAGCGAAGGGCTGAAGAAGAAACACGCAAAATTCAGGAGGCTGCATGTGAGCAACTTCAAAGACTGCAAAAAGAACAACTTATCGAGAAGATATCCATTAACAGCTTTCAAGTCAAAAGATCTGAATCGGGTGTCACTGTGGATGACCTCAAAGACGATCCTACGCAAAAagaataa
Protein Sequence: MNEGSEYSIHSICRICLNHLRNDPAYDLFLVPGLAKKLCVCTSLSVEQHDGFPKNLCTNCYTKLNDLHGFQKLCVDSVQKFQEMVASNYFVPVARDIDKVDMLTGAPIDGEADDDNINFDPLLNTKIEIVESEEDVFKMLDDVDKEAEEVEKEVERARYISSDSDNDNENYIDDDGDVDFQVNSSDSDDAVPLSRLRSSTRASTTKAKTNTADDDEDDSSSFEWAENKEDDMDKPKPKPRRKRAQGPAAPIDGLVDCHICHEKFQSTKLYEEHMEHHNDQLPFQCSVDDCKKGFTTAGGLRLHMDHAHSEFSEVHACTAEGCDKTFPRSVLLTFHMKKVHNIIKTPSRNHPCTECDKVFRCSTALKKHMYKHTGEEKPISCNICNKRFHINSDLRDHLLRHAGVKNYVCPYCGVGKTTRQEWNKHILTHTKEKQFQCLQCDHASHNKQALANHVKVVHMKIKDFACQYCGKTFGKSYSCKVHERLHTGENCSKCKICGKVFLFEKGLTKHLKTHEKRDKTRPASATAVKPNDDEGAKGTQNAIQELTQPVDGKVVSGVSTKPKTSNRVERVDISQLAGTSVNPISSVSVPSWSPQVNFTKKEGQHICPGCGRGFNHIGNMKLHYKIIHEKVKDFACRFCPKRFSKAQILKHHEWVHTGEKPYECKVCGKHFRQESVMKNHLRRVHENAKPAKEPKPPKTVLRPTGPHVLLNKKHVLKNFDEYQDPAAEQAAATAALLAQQQEENEAKRRAEEETRKIQEAACEQLQRLQKEQLIEKISINSFQVKRSESGVTVDDLKDDPTQKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00498311;
90% Identity: iTF_00517164;
80% Identity: -