Dlon004540.1
Basic Information
- Insect
- Drosophila longiperda
- Gene Symbol
- dmd-4
- Assembly
- GCA_035042125.1
- Location
- JAWNLV010000106.1:3538288-3541003[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-25 6.7e-22 77.1 8.9 1 47 35 81 35 81 0.98 2 2 0.33 1.4e+03 -0.8 0.2 23 31 308 316 300 320 0.79
Sequence Information
- Coding Sequence
- ATGGCTGACGATAATCTTGGCCAGGGTCAAATTAACGCCAAGCGCGCACGCATCGCTGTCACCTCAAAGATTGCCAAACCAGTCGAAATAAAGGGCTCCAATCGGGTTCCCAAATGTGCCCGTTGCAGAAATCACGGAATTATCTCCGAGCTGCGAGGACACAAGAAATTGTGCACCTACAAAAGCTGCAAGTGCGCCAAGTGTGTCCTGATCTTCGAGAGGCAACGCATCATGGCTGCTCAGGTTGCCCTGAAGCGTCAGCAGGCGGTGGAGGATGCGATTGCACTGCGTTTGGTGGCCAATAAGACGGGTCGGAAAATCGATGCACTGCCGCCGGGTAACATCTTTGGCTTGACTGTGACGCAGCCAAAGAACCAAAAACTGGAACTTGAGCAgcaggcggcggcggcggtagATGTTTCACAGGAGGAGCAGCTTGATGAGGAgtcgccgctgctgttgccggcACAGCGTGAACAGGAGCCGGAAGCGTTGGTTGTGCCACAGGATCTGAGTGGCAAGCGTCGCGAGCAGGTCTCCCAAACGGCCATCGACATGTTGGCGCAACTGTTTCCACAACGCAAACGCTCAGTGCTGGAGCTGGTGCTCAAGCGCTGCGACTTGGATCTGATACGCGCCATCGAGAACGTTTCGCCGCCCGCTGAGCAGGCATCCGTTGAACAgcttctgcagcagcagcagccgcagcagcagcagttgctgcagtcACCGCTGCCGTCGACGGCGCCTGCAACGCTGCCCCAATCTCTGCAGCTGGCTTTGCCGGCACGCAGCAGTGCCTTCAGGCCAGTTATCGCGGAGCAGTTTGCTGGCAAATCTTCGACCATTTGCGCCTACCCCAAGTGGTTTGTGCCTCTATCCTTTCCGGTCACCATGGGCCACCTGTCCAATCTAGCGCCGCGCTGCACTCTgcccaactgcaactgccTGGAGAGCTATCAATTTCACtag
- Protein Sequence
- MADDNLGQGQINAKRARIAVTSKIAKPVEIKGSNRVPKCARCRNHGIISELRGHKKLCTYKSCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVANKTGRKIDALPPGNIFGLTVTQPKNQKLELEQQAAAAVDVSQEEQLDEESPLLLPAQREQEPEALVVPQDLSGKRREQVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPPAEQASVEQLLQQQQPQQQQLLQSPLPSTAPATLPQSLQLALPARSSAFRPVIAEQFAGKSSTICAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCNCLESYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00595961;
- 90% Identity
- iTF_00522190;
- 80% Identity
- -