Dlit015270.1
Basic Information
- Insect
- Drosophila littoralis
- Gene Symbol
- stc
- Assembly
- GCA_018903485.1
- Location
- JAEIGF010000057.1:665212-669121[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.4 1.1e+04 -3.6 0.5 15 18 360 363 359 364 0.79 2 16 2 1.5e+04 -4.1 1.6 15 19 387 391 386 391 0.81 3 16 0.056 4.4e+02 0.8 2.0 4 11 420 427 419 428 0.90 4 16 5.8e-07 0.0045 16.8 15.1 1 19 432 449 432 449 0.93 5 16 1.7 1.3e+04 -3.9 0.9 6 10 475 479 474 479 0.88 6 16 2.2e-08 0.00017 21.3 13.6 1 18 485 502 485 503 0.98 7 16 2 1.5e+04 -6.2 4.1 7 13 507 513 507 514 0.77 8 16 2e-09 1.5e-05 24.6 12.9 1 19 543 561 543 561 0.98 9 16 1.1 8.7e+03 -3.3 0.5 5 10 591 596 591 596 0.90 10 16 2.4e-05 0.18 11.6 17.0 4 19 609 624 602 624 0.88 11 16 0.061 4.7e+02 0.7 11.7 1 11 664 674 664 686 0.79 12 16 2.8e-10 2.2e-06 27.4 15.1 1 18 691 708 691 709 0.97 13 16 2 1.5e+04 -4.4 1.2 6 10 738 742 738 742 0.88 14 16 2 1.5e+04 -7.3 10.4 10 18 756 765 745 766 0.78 15 16 2.1e-07 0.0016 18.2 15.0 1 16 802 817 802 827 0.93 16 16 7.6e-07 0.0058 16.4 12.4 1 19 834 853 834 853 0.96
Sequence Information
- Coding Sequence
- ATGGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAACGGTGCTGACGCAGCGCCTGCTGCGGACGCCTCAACCACAGCGAATGGGCACAACAACAACAACAACTATGTGAATTTTAATCAATTTATCACACAACACAACTTGGCCAGCTCCAGTCTGGGCTACAGCATTGGCGGTGGCGGCGGCGCCTTTGGCCTGACGCCCAGCAGCAGCGCCGCCAGCAATTTTGGCGGCGGCGGCGACAACGTGAGTGCATGCTACAATTTTACAGTTATATTTATGTCAATATTCACCTCAAATTTACAGTTGTATGCGCCAACGTTTTATGCCTCTCAAAATGGCGCAGCCGCAGCCGCTGCTTATCCCAATCTTTATACACCCTTTGGAAATAATCCGTTTGCTGCCGCTGGCGTTGGCTACGATTTCAGCGCTTCCAAGCTGCAGGCCTCAGCGCCCGAATTTGTGCCCAATTTTGCCAAGCTCAGTTTGACGTCGGCGGCGGCGGCGGCGTCGCCGTCAGCGTCGGCGTCCAGCAAAAATCATAACAACAACAACAACAACACTGCCACACAGCCAAATGCAGCAGCAGCAGGCAGCAATTCAGCACAGCCACAGCCACAAAGAGCCGACCAGAGGCAGCCAAAGCCGCATGGCAGCGGCAACAATAGTCGGCAGCAGCGACGCAACGACTACCGCGAGGATCGCAACGAGGAGCGCTATGAGCGCGGCAAGAAACCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAATAAGCGACGCGACGATTGGAATCGCAATCGGGATCGCATCAATGGCTATCCACGAGCCAACGAGGAGCTGGACACAAGCAACAGCAATGACAGCGCACAGCCCTCGCCAGAGAAGCAACCGTCGCAACAGCAGCTGTACCAGCAGCAACAAATCTCACCAAGACGCGCGCCGGATCATGAAAAGCTGTCGCAGCGGGAGAAGCTAATGCGCGACATTGAGCAGCGGCGTCTGGAGTGCCTGGTCTGTGTGGAGCTGATCAAGGCGCATCATGGCACCTGGTCGTGCCAGAATTGTTATCATGTGCTGCATCTGAAGTGCACCATCACCTGGGCCAGCAGCTCGAAATCCGCCGAGGGCTGGCGCTGTCCCGCCTGCCAGAATGTGCTGCAGGAGCTGCCGCGCGAATATTTGTGCTTCTGTGGCAAACTCAAGAATCCACCGTTGACGCGCACCGAACTAGCCCACAGCTGCGGTGAGCTGTGCTGCCGTGTCGAGGGCTGCAGCCATGCGTGCACGCTGCTCTGCCATCCCGGTCCGTGTCCGCCATGCCAGGCGAATGTCAGTCGCAGCTGCGGCTGCGGACGCACCTCCAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGTGAGGCCATTTGCGACAAGCTGCTCAACTGCGGCGAGCATCGTTGCCAGCAGCCGTGCCATGCGGGCAAGTGTGAGGCGTGCGCGGAGCAAGTGCAGCAGCACTGCCATTGCGGCAAGCAGCAGCGCGAGGTGCAGTGCACCCGCGAGAGCCAGGATAAGCGCAGCTATTCGTGCAAAGAGTGCTGCAGCAAGCCGCTGCCCTGCGGCAATCATAAATGCAAGGATTCATGCCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCACACAAATCACCAGCTGCCCCTGCGGCAAGCTGCCGGTGCCGGCAACGCAGCGCAGCAGCTGCCTGGATCCGGTGCCCACCTGCGAGGGCGTCTGCGGCAAAACTCTGCGGTGCGGCAAACCTGCGCATCCGCATCAATGCGCCAGCAAATGCCACCTGGGCCAGTGCCCGCCCTGCCCCAAGCAAACGGCGGTCAAGTGTCGTTGCGGCCACATGGATCAGATGATCAAGTGCCGCCAGTTATCTACCCGTGCGGACGATGCGCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAATGCAGAGTGCTGCATCGATATCGATCACGCCTGCCCGTTGCCCTGCAATCGCACGCTCAGCTGTGGCCGGCATAAATGCGATCAGCCCTGTCATCGTGGCAATTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGTGAGTGCGGCGCCGAGGTCATTTATCCGCCGGTGCCATGCGGCACCAAGAAGCCCATCTGCAAGCGACCCTGTTCGCGGACGCACGGCTGCGAGCATCCACCGCAGCACAATTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACCAAGTGGTGTCATGGCAATCACGAACAGCGCAAGACCATACCCTGTTCCCAGGCGAGCTTTAGTTGTGGCCTAGCCTGCGGCAAGCCGCTCGCCTGCGGTCGCCACAAATGCATACGGCCCTGCCATGAGGGCGAATGCCAGCAGCCGGGCGAACTGTGCCGCCAGAGCTGCACCAAGCCGCGTCTATTGTGCGGCCACAAGTGCGCGGCCATATGCCATGAGGGCGTCTGTCCTGAAACGCCCTGCAAGGAGCTGGTCGAGGTGCAGTGTGAGTGCGGCAATCGCAAGCAAAGCCGCAGCTGCCAGGAGCTGGCACGGGAGCACAGTCGCATTGCCACCGCACAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAGATACTGGCGCCCAACAAGAACAATAAATCCAACAAAACCTTGAACTGCAATGATGAGTGTCGTCTGTTGGAGCGTAACCGACGCTTGGCTATTGGCTTGCAGTCGCGTAATCCGGAGACGCAGGTCAAGTCGCTGACAAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGCGCTGACCAAGAGCGTCTATGAAACACTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAAAAGTCGAGAAGTCACTCGTTTCCCACAATGAATCGTGAGAAGCGACAATTGGTGCATGAACTATGCGAAGTTTTTGGCGTCGAGTCTGTTTCCTACGACAAGGAGCCCAATCGTAATGTGGTTGCCACAGCGCACAAGGAGCGGTGCTGGCTTCCAGCCACAAGCATCATGGAGGTGCTGGCACGCGAATCCGGACAACGTCGCGTGCCCGTGCCCAGCAACAATGCGTGGAGCCTCAAAAAGTAG
- Protein Sequence
- MAXXXXXXXXXXXXXXXXXNGADAAPAADASTTANGHNNNNNYVNFNQFITQHNLASSSLGYSIGGGGGAFGLTPSSSAASNFGGGGDNVSACYNFTVIFMSIFTSNLQLYAPTFYASQNGAAAAAAYPNLYTPFGNNPFAAAGVGYDFSASKLQASAPEFVPNFAKLSLTSAAAAASPSASASSKNHNNNNNNTATQPNAAAAGSNSAQPQPQRADQRQPKPHGSGNNSRQQRRNDYREDRNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRANEELDTSNSNDSAQPSPEKQPSQQQLYQQQQISPRRAPDHEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQHCHCGKQQREVQCTRESQDKRSYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPATQRSSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHPPQHNCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRPCHEGECQQPGELCRQSCTKPRLLCGHKCAAICHEGVCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLNCNDECRLLERNRRLAIGLQSRNPETQVKSLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- -
- 80% Identity
- -