Dlit008191.1
Basic Information
- Insect
- Drosophila littoralis
- Gene Symbol
- bab2
- Assembly
- GCA_018903485.1
- Location
- JAEIGF010000297.1:7287766-7289937[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-10 4.9e-07 29.1 0.0 1 44 417 460 417 461 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGGCCGACGCCAGTGGCCAGCAATGAGGGTCAGACGTATTGCCTGCGCTGGAACAATCATCAGACGAATCTGGTCCAGATACTGCACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGATGAGCAGTTCAAAGCACATCGCGTTGTCCTTGCGGCGAATTCGCCCTACTTTCAGGCCATACTGCAGGAGGTGCCGCAGGATCAGTGCAGCATCATACTGCCGGGTGTGAAGGGCTTCGAAATTGCCGCCCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATATTGCGCACCGCCAAGGAGCTGCAGGTGAAGGGCCTCTACGACAATCTTATGAAGTTCAATCACAAGCCATCCAACCCGGTCGACGAGCGGCCACACAATCATCAGTTCCAGGGCAGCATATCCGGTATACATCCGCATCCACATTCGCATCCGCACTCTGCTCCCACCTCCAGTTGTTCGAGCAGCAAGCCGCTCAATGGCGCCGGCACTGATGGCTCCTATGGCACGCACCATCATGGCCAGCACAATTCCTCCTCCGTGATCTCAACGTCCACGCATATATCGCCCAGTGCGGCCATATCGAGCAGCTGCTCGCCGCCTCCCCCGCCGTTTGGCTCGTATCAAACGCCCTACACGAACTTTCCGGCCTCCAGCGGTGTGCCCATCAACATCAACGCTCACATTTCGGCTGGCGAGGCACCGCTGACACCCACACACTCAACGCCCCATCCGACTGCAGGCGAGGCTGGCCAATGGCCGCTGTCACCGTCAGCCGCGGCGGCGGCAATGTTGAATTCCGTGTACGAGTCGGCGGCGGACATGAATCCGCTCAAGCGCAAGAAGCTGTCGGCCATTTCGAGCATGCTGTTGAACACCACACGGGACACGCCCATTCTGCGCAATGTGCTCGCCCAGGCGAATCCGCCGGACTCCTCGCAGCCCAATCCCCAGCAGCAGCAGCTGCTGCTGCTGCCCGGCGTCAAGCAAGCCGCCGAGAAGACGCCCACACATCAGCATCAGCATCAGCATCAGTTGGGCAGCGGCAGCGCGGCGGGCGCTGGCAGCCACAGCTTCAATGGGTCCGACTATGGCGGCGACAAGGAGCCGCTGTCGCCGCACACGGATCGCTCCTTTGACGAGGAGACGGGCGGTCAGGGCGGCAAGAAGCCGGAATGGAAGCGATACAAGCAATACACCCGGGCGGACATGATGTGTGCCATTCAGTGTGTGCGCGAGGGCATGAGCGCTCTTCAGGCCAGTCGCAAGTTCGGTCTGCCGAGCCGCACGCTGTACGACAAGGTGCGCAAGCTGAACATTACCACCGGCCGGGGCACCCATCGCACGCCCAAGCGCAGCCCACCTGGCGTCGGAGGCGTCGAGTCGTCGGCCGCATTTCCCTATTCGGCTGCGGCCGCAGCGGCGGCGGCTGCCCATAACTACGGCCAGGCGGAGCTGGAGCGCGAGCCGAAGGAGCACGGACATGGCCAGGGCGCCGGGCATGCCCATGCCCATACCGGGCATCATGGTATGCCGCCCACCATTCCGCATTCGGCTGCCGCGCTGCTGGATCATGCCTTTCTGCAGCAAGCGCTAGAGAATCGTGGCGGCGATATTGCAGGTCGCGAGGCGTTGCACGCCATGGCTCTGGCGGCAGCCGCACACGCGGCAGCCAATCGCATGTCCAGCAGTCCGCCGGGCTCCAATGGCCATGCGGCCCGTTCGCCCAGCCACTATGCCGACCAGGAGGCGCTGGACAAGCACGAGCATCGTCTGATCAAGCGCGAGGCCATTGAGGAGGAGCGCGACGCCGACGACGAGGATGATCACGATCAGGTGGAGGATCTGTCGCTGGCACGCAAAGAGCGTCCTGAGTCGCCCTACTCGCCGCCCCCGCCGCGCGCTGCCTCGCCCATGGAGAGCGCCAGCGTGATCATGCACTCCAACTCGGCATCGGTCTCAACGAATGGCAAAGAGTCGCACGAGCTGGAGCCAGAGCAGGATCACGAGCTGGAGGACTACAGCGAGGCGGCATCACCAGCGTCGCAGCCCCAGAGCATGGGCGTGGGCCTGAAGCGCGAGCTGCTCGGCAGCGACGAGGCACAGGCGCGCACCGACTGA
- Protein Sequence
- MGGPTPVASNEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQEVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKPSNPVDERPHNHQFQGSISGIHPHPHSHPHSAPTSSCSSSKPLNGAGTDGSYGTHHHGQHNSSSVISTSTHISPSAAISSSCSPPPPPFGSYQTPYTNFPASSGVPININAHISAGEAPLTPTHSTPHPTAGEAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNTTRDTPILRNVLAQANPPDSSQPNPQQQQLLLLPGVKQAAEKTPTHQHQHQHQLGSGSAAGAGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGQGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVGGVESSAAFPYSAAAAAAAAAHNYGQAELEREPKEHGHGQGAGHAHAHTGHHGMPPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAARSPSHYADQEALDKHEHRLIKREAIEEERDADDEDDHDQVEDLSLARKERPESPYSPPPPRAASPMESASVIMHSNSASVSTNGKESHELEPEQDHELEDYSEAASPASQPQSMGVGLKRELLGSDEAQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802934;
- 90% Identity
- iTF_00534663; iTF_00475144; iTF_00475300; iTF_00526664; iTF_00526504; iTF_00490707; iTF_00490863; iTF_00506200; iTF_00506035; iTF_00563100; iTF_00563255; iTF_00616828; iTF_00616987; iTF_00530880; iTF_00531039;
- 80% Identity
- iTF_00534663;