Dbor011676.1
Basic Information
- Insect
- Drosophila borealis
- Gene Symbol
- bab2
- Assembly
- GCA_035045885.1
- Location
- JAWNOR010000206.1:8329772-8331976[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-10 7.3e-07 29.1 0.0 1 44 421 464 421 465 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGGCCGACGCCAGTGGCCAGCAACGAGGGTCAGACGTATTGCTTGCGCTGGAACAATCATCAGACGAACCTGGTCCAGATACTGCACGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTCGTCGACGATGAGCAGTTCAAGGCGCACCGCGTTGTCCTCGCGGCCAATTCGCCCTACTTTCAGGCCATACTCCAGGAGGTGCCGCAGGATCAGTGCAGCATCATACTGCCAGGCGTGAAGGGCTTCGAAATTGCCGCCCTGCTCCAGTACATGTACACGGGCGAGACGACAGTGACCAAGAGCCAGGAGCCAGAGATATTGCGCACCGCCAAGGAGCTGCAGGTGAAGGGCCTCTACGACAATCTCATGAAGTTCAATCACAAGGCATCCACTCCGGTCGACGACCGTTCACACAATCATCAGTTCCAGGGCAGCACATCCGGTGCACATCcccatccgcatccgcatccgcatcatCAGCATCCGCATCAGCACTCTGCCCCTACATCCAGCTGTTCCAGCAGCAAGCCCCTCAACGGCGCCGGTACTGATGGCTCCTATGGCACGCACCATCATGGCCAGCACAATTCCTCCTCCGTGATCTCAACGTCCACGCATATATCACCCAGTGCGGCCATCTCGAGCAGCTgctcgccgccgccgccaccgttTGGCTCGTATCCGACGGCCTACACGAGCTTTCCGGCGTCCAGCGGAGGACCTATCAACATCAACGCTCACATATCCGCTGGCGAGGCACCGATGACGCCCACACACTCAACGCCCCATCCAGCTGCCGGCGAGGCTGGCCAATGGCCGCTCTCCCCGTCCGccgcggcggcggcaatgCTCAATTCGGTGTACGAGTCGGCGGCGGACATGAATCCGCTCAAGCGCAAGAAGCTCTCGGCCATTTCGAGCATGCTGTTGAACACCACACGGGACACGCCCATTCTGCGCAATGTGCTCGCCCAGGCCAATCCGCCGGACTCGTCGCAGCCCAATccccagcagctgctgctgcccggcGTCAAGCAAGCCGCCGAGAAGACACCCAcccatcagcatcagcatcagcatcagctgggcagcggcagcgctgcGGGCGCTAGCAGCCACAGCTTCAATGGGTCCGACTATGGCGGCGACAAGGAGCCGCTGTCGCCGCACACGGATCGCTCCTTTGACGAGGAGACAGGCGGCCAGGGTGGCAAGAAGCCGGAATGGAAGCGCTACAAGCAATACACCCGGGCGGACATGATGTGCGCCATTCAGTGTGTGCGCGAGGGCATGAGCGCCCTTCAGGCCAGCCGCAAGTTCGGTCTGCCGAGCCGCACGCTATACGACAAGGTGCGCAAGCTGAACATCACCACCGGCCGTGGCACCCATCGCACGCCCAAGCGCAGCCCACCTGGCGTGGGAGGCGTCGAGTCATCGGCCGCCTTCCCCTATTCAGCcgcggcggcagctgcggcggctgctcaTAACTACGGCCAGACGGAGCTGGAGCGCGAGCCGAAGGAGCACGGACATGGCCAAAGCGCTGGGCATGCCCATGCTCATTCCGGGCATCATGGTATGCCGCCGACCATTCCGCATTCGGCTGCCGCCCTGCTGGATCACGCCTTCCTGCAGCAGGCGCTGGAGAATCGTGGCGGCGATATCGCTGGACGGGAGGCGTTGCACGCCATGGCCCTGGCGGCAGCCGCACACGCGGCAGCCAATCGGATGTCCAGCAGTCCGCCGGGCTCCAATGGGCATGCGGCCCGTTCGCCCAGCCACTATGCCGACCAGGAGCCGCTCGACAAGCACGAGCATCGTCTGATCAAGCGCGAGGCCATTGAGGAGGAGCGCGACGCTGACGACGAGGATGATCACGACCAAGTGGAGGATCTGTCGCTGGCACGCAAAGAGCGTCCCGAGTCGCCCTACTCGCCACCCCCGCCGCGCGCTGCCTCGCCCATGGAGAGTGCCAGCGTAATCATGCACTCCAACACGGCCTCAGCGGTCTCGGCGAATGGCAAGGAGGCGCATGAGCATGAGCTGCAGCCGgaacaggagcaggagcaggaccACGAGCTGGAGGATTACAGCGAGGCGGCATCACCAGTGTCGCAGCCCCTGAGCATGGGCGTGGCTCTGAAGCGCGAGCTGCTCGGCAGCGATGAGGCACAGGCGCGCACCGACTGA
- Protein Sequence
- MGGPTPVASNEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQEVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKASTPVDDRSHNHQFQGSTSGAHPHPHPHPHHQHPHQHSAPTSSCSSSKPLNGAGTDGSYGTHHHGQHNSSSVISTSTHISPSAAISSSCSPPPPPFGSYPTAYTSFPASSGGPININAHISAGEAPMTPTHSTPHPAAGEAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNTTRDTPILRNVLAQANPPDSSQPNPQQLLLPGVKQAAEKTPTHQHQHQHQLGSGSAAGASSHSFNGSDYGGDKEPLSPHTDRSFDEETGGQGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVGGVESSAAFPYSAAAAAAAAAHNYGQTELEREPKEHGHGQSAGHAHAHSGHHGMPPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAARSPSHYADQEPLDKHEHRLIKREAIEEERDADDEDDHDQVEDLSLARKERPESPYSPPPPRAASPMESASVIMHSNTASAVSANGKEAHEHELQPEQEQEQDHELEDYSEAASPVSQPLSMGVALKRELLGSDEAQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802934;
- 90% Identity
- iTF_00534505;
- 80% Identity
- iTF_00490863;