Dlim017942.1
Basic Information
- Insect
- Drosophila limbata
- Gene Symbol
- dl
- Assembly
- GCA_963924055.1
- Location
- OZ001353.1:26259010-26264766[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-56 2.2e-52 178.1 0.0 2 168 42 209 41 210 0.97 2 2 0.21 1e+03 0.2 0.0 132 166 210 244 208 246 0.80
Sequence Information
- Coding Sequence
- ATGGCTGATGAGGAGCGCTTAAATTATCCGCAAGACATCACAAATCCTCCAGTCCGACAGTCCTTCTCATTGCCGGCGATGGCATCCAACGTGCCGCCCCCGATGCCACACCTACCTTACATATGCATCCTCGAGGAGCCGACGAACACGACCATACGCTTTCGCTACGCATGCGAGGGACGCACGGCGGGTTCCATTCCCGGCATGAACTCCACGTCGACCAACAAGACGTATCCCACCATCCAGATTCGCAATTACAATGGACCCGTTGTTGTGGTCGTCACGTGTGTCACTGCTGATCCGCCCTATTATCAGCATCCACATATTTTGATCTGCAAGGAAGAGGGAATCAGCTGCAAAGATGGTGTCTATTCTAAAAATTTGGGACCCAACGAGCGCTTCGAGCTACAAAAAGCTGGTATTCAGTGTGTCAAGAAGAAGTTTGTAAAAGAATCGCTGGAGATGCGCAAGTTGAAAAATGTGGATCCATTTAAAGCTGGCTTTGGACACATGGAAGACCCTAGCAAAATAGATCTGTACCGGCTTCGTTTGTGCTATCAGGCGTTCATCAGGGTGGGCAACAGAAATGTGGCCTTGGATCCCGTCGTATCCTCGCCAATCAACGGAAAGAGCACCGATCTAACCATCGTCAGGCTTTGCAGCTGCTCTTCGAAGATGAGCGGAGGTGATGAGATCATGATGCTCTGTGACAAGATCGTAAAAAATGACATAAGTATACGTTTCTTTGAGACGAATGACAATGGTGACGTGATCTGGGAAGATTATGGAATCTTTGGGAATCAGGATGTCTACAAACAGATGGCGATTACTTTCAAGACCCCGCGTTATCATAAGCCCGAGACCCAGCATTGTGTTAAGGTGGCGTTGCAGCTAGTGCGAAAAACGGATAATGCGACGAGTGAACCCCGGGAATTCGAGTACTATCCCAATCCAGGTATGCTAACATTTGCGCGTCTGCAGCGCAAGCTGAAGCGCAAGCAGGAGCTGGACGTGTTCCAGCAGATACTTTCCATAGATAGCGAGACGACGGCCACGAAGTATTCGTGTCCGCCTGTGGATATCAATGAGGATGAGAACACAGTGTCATCGGACGAGCAACAGAGTTCGGGAACTTTAAATGAGTTCGAGATAGCGGTTAAGAAAATGGTGCTGCGGCAACGTGTGGAGTCGGAGGCGGATGCCACGGCCACAGAGTACACCGATGGCCTGgacaatgacaatgatgaGGAGGCGGACATGGGTATTGAGTTGGAGGTGCCGCAATTGTTGCCACAACTGGCGGACGATTGCACACAGACTTCGACGCCCATGGAGGAGATACTCCAACAGCCGCAGCTCCAGTCGCGTCCGCTGAGCAATGTGGACAAAATCAATGAGTGGATGAAGAGCAGCGAGTTCGAGAGAACCGATAGTCTCACCGTGGAGAACGGTGACACGCCCACCGTCTCCCACAGCACCGCCCAGACGGCGTTCACCAATGTGAGCAGCGTGACCGCCAATACGACCATAACGAATCagctggaggaggaggaggaaagGCTGCAGGAGGATGGCGAGCGAGATGTCAACGGCTCACGACGCGATACACTCGAGAATGCCGCGCTCAAGGAGCTGCCGGTGGGGGAGGAGACCCTCCCCCCTGGAGAGGAATCCCTGCCTGAGCCGGAAATGGAGACGAAGCCAGAGCCGGAACTGGTCAGCGCAAGTGCTCAAGCCTCCGTGGACATAGATGAGAATTTTGATGAGACTGCAACGTATACGAGTCTGCAGATTGCCTACAATCATCCCGTGGAAATGCCAAAGAACCAGAATCAAGTCTACCATGCCAGCAATCCCTTTAGCCAGCTGGACGAGGCCGAGCTGGTGGTGTTGACCAATCCACCGGCGCCCAAGATCAAAGTGAATGCCGCCCAGACGCCAGCAACTCCGCCCGTATCGCCTCCCCTGCCGCTGCCACCGCGCACACCGTCCCCCGATCCCGACCATCGATTGCCTCCACTTCCCCCCAAGCCACGACACTCTCAAGACTTGAGTGTCAGCGAGCAGAGCGCGTCCAATTCCGTGTCGTTGAGTCGATCGAGGAATGGGAGTGTCAGCTCCACACGGACAACGCCCTCGCCCATAATCATAATGCGCACACCAGATCAGAGTCCCACCAAGAGATTGCCCACGGGATTACCCAGTACTTCCGCATCGACTTCAGCCTCGGCCTCGCCCAAGAAACGACAGGGATTCTTCTCCAGATTGTTCTCGCGTCGTCGCAGCCGGGCCGAGGATGAGGAGACGCTCTCGGTGAATGGCAAGCAACAGGATTTGACGCCCACTGGCAGCCGTGAGCCGAGTCTGGCCCACTTTGCCCTGGGGGATCCCAATCGCAGCTCCATTCGATCCTTACAGCCACCTGGCTTGAGTCCCAATAAAAGCGGACGTCCCGTGGGACGCAGCTCGAGCAGCGTTTCGGGCAAAAGACCCGCCCACCTGGATGCGGATGTCATCCACATTCCGCTCAAGGGCGGCGACAGCGAGAACAGCTTGCTGCGTCCCGAAAGCTATTCGAATGCCAGCACCTTGTCCTATGGACGACCCTTGGACCGGAAGACGTTGAGCACGCTGCAATTGGCGGATATACCCATCAGCGATGGCAACATGGAGCTGGTGGCCATTGCCGATCGCCAAAGCATTAAGAATCTATGCGAGGGCGCCTATGGCGTAATGCTCGATCCCAGCGTAGATCTCTCCGAGGCGGAACACTTTGCGCTCTACACGAGTAAATCTCCCGAACCGGAGCGGGAGTTGGACGGGAGTGGCGGGACGGAAGGGGATCAAGGGGATTTCTTGAGTGCGGATGAGATTGCAAGGCGTCTGGCTGAGGCCAATGGGCTGCagtaa
- Protein Sequence
- MADEERLNYPQDITNPPVRQSFSLPAMASNVPPPMPHLPYICILEEPTNTTIRFRYACEGRTAGSIPGMNSTSTNKTYPTIQIRNYNGPVVVVVTCVTADPPYYQHPHILICKEEGISCKDGVYSKNLGPNERFELQKAGIQCVKKKFVKESLEMRKLKNVDPFKAGFGHMEDPSKIDLYRLRLCYQAFIRVGNRNVALDPVVSSPINGKSTDLTIVRLCSCSSKMSGGDEIMMLCDKIVKNDISIRFFETNDNGDVIWEDYGIFGNQDVYKQMAITFKTPRYHKPETQHCVKVALQLVRKTDNATSEPREFEYYPNPGMLTFARLQRKLKRKQELDVFQQILSIDSETTATKYSCPPVDINEDENTVSSDEQQSSGTLNEFEIAVKKMVLRQRVESEADATATEYTDGLDNDNDEEADMGIELEVPQLLPQLADDCTQTSTPMEEILQQPQLQSRPLSNVDKINEWMKSSEFERTDSLTVENGDTPTVSHSTAQTAFTNVSSVTANTTITNQLEEEEERLQEDGERDVNGSRRDTLENAALKELPVGEETLPPGEESLPEPEMETKPEPELVSASAQASVDIDENFDETATYTSLQIAYNHPVEMPKNQNQVYHASNPFSQLDEAELVVLTNPPAPKIKVNAAQTPATPPVSPPLPLPPRTPSPDPDHRLPPLPPKPRHSQDLSVSEQSASNSVSLSRSRNGSVSSTRTTPSPIIIMRTPDQSPTKRLPTGLPSTSASTSASASPKKRQGFFSRLFSRRRSRAEDEETLSVNGKQQDLTPTGSREPSLAHFALGDPNRSSIRSLQPPGLSPNKSGRPVGRSSSSVSGKRPAHLDADVIHIPLKGGDSENSLLRPESYSNASTLSYGRPLDRKTLSTLQLADIPISDGNMELVAIADRQSIKNLCEGAYGVMLDPSVDLSEAEHFALYTSKSPEPERELDGSGGTEGDQGDFLSADEIARRLAEANGLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00528568;
- 90% Identity
- -
- 80% Identity
- -