Dleo008904.1
Basic Information
- Insect
- Drosophila leontia
- Gene Symbol
- -
- Assembly
- GCA_008042735.1
- Location
- VNKB01017880.1:58586-60201[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-16 4.5e-13 48.7 0.0 2 45 347 390 346 390 0.95 2 3 0.044 1e+02 2.8 0.0 28 37 420 429 416 434 0.91 3 3 3.9e-20 9.3e-17 60.5 0.0 2 42 456 496 455 498 0.95
Sequence Information
- Coding Sequence
- atgAATCATCTGAAGTGGATGGGCCACTCCACCACGCTCATGGAGATACAGCGTTCGCTGCGCAATGACAATCAGACCTGCGAGGTGGTCCTGGCCTCCAGGGACGGCACCCGGGTACGCGCCCATCTCTTCGTGCTAAGCACCTGCAGCGACCTAATGCGAAACATCCTGGTGGACGTGCCGCCGGGCCAGGAGGCCACCATCATTCTGCCCGACATACGCGGCGAGCTGCTTGAGAGTATGATGTCGTTCATCTACATGGGCGAGACGAGTCTGTCGTCCACCTCCCTGTCCGAGTTCCTCGAGGCCATCAACCTTCTGGGCATTAAGTCTGCCATCAGTTTTGAGTGCAATCCAACCGTGAGTCCGCCCAGTGCTGATGCAGGCAACGGATCGCTGGCCGTGGAAACGGCCAAGTCAATAACTGGCCTGCAGATTGCCCAGGCCGAGCTGCTGGACGagggggaggaggaagaggGCGAGAACCCGCTGGTCACCGTGCCGGGCACAGTTCTGGCCGAGCCCAGTCGCCCGCTGGAGTACCTAGATGTGTATGATGCGCCGAAGATCACTTACTCCATCGAGCACATGGATGGCAACACGAACAGCAGCCAGTTTATACTCACCGAGAACACAGGCACTTTTACCATCACTCAGTCCGCCTCGAGTTTGTCCAAGATGGAGACCCAGGGCAATGCTCAGGAGGAGAACGCCGAGCTGGGGGACGAGGATGTGGATGAGGATGCAACCGATGAGCCCGAAGAGCCAGACACACAGATAATGGAGGAAGACTACACTCCAACCGATCCTCTAATTGAGCTAAACGCTGCCGCCGAAATGGACGACGATGACAACTTGCACGAGGATTTGGTGGACGAGGAGGATATCCTGGACATTAAGCCACGCAAActgggcggcggcggaaaGTCGCGTGCACGTCGTCCGCACAATACAAGGGCCGCCAAGCGTCAACTGCCCCCTAAGCCCCATCGACAGGAACAGTATGGATCTCTGAAGCGCGAGGTAAAGGATGACATCAACGACGCCCTGGATCTGGCAGCGGATGCTGTTATCCTCGAGGGACTGAGCCTACAGAAGGCTGCCGACCGCTTTGACATCTCCAAGACGGTCCTGTGGCGTCGCGTGCGCACCAATCCCGCCTATATGCGGAGTAATCGCGAAAGGCCAGCGCTTCTGGAGGCTTACGAGCGTCTAAAAAACGGCGACTCGTTGAAGAACATTAGCCAGGAACTCCGCATACCAATGTCCACGCTGCACCGTCACAAGGTGCGTCTATCGGCCCAGGGTCGCCTGCCAAATTTTGTGGCCTGCCGCCGGCGGGACTCGACACCCAAGGACGAGCTGCGCGACAAGCTGGCCAAGGCGGTCCATGCCTGCATCAACGAGGGCATGTCGCAAAACCACGCAGCCAATCTGTTTGAGATCCCCAAGAGCACGCTCTGGCGGCACCTGCAGCGACGGATGTCGAACCAGGATCGAAAGGTGAAGAAGGAACTGCATGACGAGTACGATGACGTGCTAAACTAG
- Protein Sequence
- MNHLKWMGHSTTLMEIQRSLRNDNQTCEVVLASRDGTRVRAHLFVLSTCSDLMRNILVDVPPGQEATIILPDIRGELLESMMSFIYMGETSLSSTSLSEFLEAINLLGIKSAISFECNPTVSPPSADAGNGSLAVETAKSITGLQIAQAELLDEGEEEEGENPLVTVPGTVLAEPSRPLEYLDVYDAPKITYSIEHMDGNTNSSQFILTENTGTFTITQSASSLSKMETQGNAQEENAELGDEDVDEDATDEPEEPDTQIMEEDYTPTDPLIELNAAAEMDDDDNLHEDLVDEEDILDIKPRKLGGGGKSRARRPHNTRAAKRQLPPKPHRQEQYGSLKREVKDDINDALDLAADAVILEGLSLQKAADRFDISKTVLWRRVRTNPAYMRSNRERPALLEAYERLKNGDSLKNISQELRIPMSTLHRHKVRLSAQGRLPNFVACRRRDSTPKDELRDKLAKAVHACINEGMSQNHAANLFEIPKSTLWRHLQRRMSNQDRKVKKELHDEYDDVLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00594467;
- 90% Identity
- iTF_00488768;
- 80% Identity
- iTF_00533201;