Basic Information

Insect: Drosophila lacteicornis
Gene Symbol: stc
Assembly: GCA_008044355.1
Location: VNKF01005920.1:1-7004[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.9e+04 -4.2 1.6 15 19 459 463 458 463 0.81

2 14 0.05 4.7e+02 1.0 2.2 4 11 492 499 491 500 0.91

3 14 6.2e-07 0.0058 16.7 15.1 1 19 504 521 504 521 0.93

4 14 2.8e-05 0.27 11.4 9.0 1 18 557 574 557 575 0.95

5 14 2 1.9e+04 -6.3 3.9 7 13 579 585 579 586 0.74

6 14 3.6e-09 3.4e-05 23.8 13.6 1 19 615 633 615 633 0.98

7 14 0.00011 1 9.5 16.7 4 19 681 696 674 696 0.88

8 14 0.075 7e+02 0.5 11.9 1 11 736 746 736 758 0.79

9 14 5e-10 4.7e-06 26.6 15.5 1 18 763 780 763 781 0.97

10 14 1.8 1.7e+04 -3.9 0.9 6 10 810 814 810 815 0.81

11 14 2 1.9e+04 -9.2 11.6 10 18 828 837 817 838 0.71

12 14 2 1.9e+04 -4.4 1.5 9 13 844 848 843 849 0.79

13 14 1.3e-08 0.00012 22.1 10.7 1 17 874 890 874 896 0.94

14 14 1.5e-06 0.014 15.4 12.5 1 19 906 925 906 925 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.9e+04	-4.2	1.6	15	19	459	463	458	463	0.81
2	14	0.05	4.7e+02	1.0	2.2	4	11	492	499	491	500	0.91
3	14	6.2e-07	0.0058	16.7	15.1	1	19	504	521	504	521	0.93
4	14	2.8e-05	0.27	11.4	9.0	1	18	557	574	557	575	0.95
5	14	2	1.9e+04	-6.3	3.9	7	13	579	585	579	586	0.74
6	14	3.6e-09	3.4e-05	23.8	13.6	1	19	615	633	615	633	0.98
7	14	0.00011	1	9.5	16.7	4	19	681	696	674	696	0.88
8	14	0.075	7e+02	0.5	11.9	1	11	736	746	736	758	0.79
9	14	5e-10	4.7e-06	26.6	15.5	1	18	763	780	763	781	0.97
10	14	1.8	1.7e+04	-3.9	0.9	6	10	810	814	810	815	0.81
11	14	2	1.9e+04	-9.2	11.6	10	18	828	837	817	838	0.71
12	14	2	1.9e+04	-4.4	1.5	9	13	844	848	843	849	0.79
13	14	1.3e-08	0.00012	22.1	10.7	1	17	874	890	874	896	0.94
14	14	1.5e-06	0.014	15.4	12.5	1	19	906	925	906	925	0.96

Sequence Information

Coding Sequence: CAGGCGATTTCCGGACTGCGGTGTGGACGCCCGTCCGCTATCGAGACACCGGGGAAGCTGACACCAATCCGGATCAGGCTGAGCACGTCACAGCGTAGGTCGCAGGGAGAGGAGAAAGAGGTGCTGCAGGAAAGTGGCGGCGGTGGAAGAAGCGGACTCACTTCAGCCATGGACGAGTATTGGCAGCAGCTGACCAACGGTGTTGCTCGTGGAGGACCGGCCACTAATGAGTCAGCGGTGATCTACAATGGTCACGGTCACGAGGCAGCAGAGCAAGCGTCtggcagcagcgccagcggcgctaccagcaacagcaacaacaactatgtGAACTTTAATCAGTTCATCCAGCAGCACAACCTGGGCGGAGGATCATCGCCCACTGCCAGCGCCGCAACAATGCAGCATCCGTTAAGCAGCGGCAATAACACAAACTACAACATcggtggcggcggaggagccTTTGGCCTAAATCCGCCAGTGGCTCCGTCAGTGAATTCCAACAGCTTTGGGCATCTTTATTCGCAGCCCATATTCCCAGCGTACCAAAATGGAGAAAGCGCCGCCTCTTTCACCAACAGCTATGATGATACCTTTTCGAATCTGTACACACCGTTTGGCAACAATCCGTTTGACTTCAGCTCTTCCAAGCTACAGGCCTCGGCACCCGAATTCGTTCCCAATCTGGCCAAGCTGAGTCTGAACGAAACTCCGGCGGCAACGACGCCAAACGGGAACAGGAACATCACTGCCAGCCAAGAAACTGCCATTAATGTGACGGGAACAAGGACGCCACAGCCGGGGGGAATCGGTGGCTTAGGAGGAGTCTCCGAACGAGGAGACCCTCACCACCTTCGCTTAACCGTTAACAGTTACGAAAGAGATCGGGGCGACAGGGACTCCCGACCGGGAAGCACGCGCCAGCAGCGTCGCTCCGACTACCGCGATGACCGCGAGGATCGATATGATCGCAAGAAGccccagaagcagcagcgctACGACAATCATCGAAGCAATAAGCGAAGGGATGACTGGAATCGCAACAGGGATCGCATCAATGGCTTTCCAAGGGCCGCCGATGAACTGGACACGAGCAACGAAAGTGCTCAGCCGTCGCCCGAAAAACATCAGACCACACAGCAGCAAATATCCCCCCGGAGAGCTCTACCGCCTCCACCGGCAGATAATGAAAAACTGTCGCAGCGGGAGAAGCTCATACGCGATATCGAGCAGCGGCGGCTGGAGTGTCTGGTGTGCGTGGAGGCGATTAAGGCGCACCAGCCGACGTGGTCTTGCCAAAACTGCTACCACGTTCTCCACCTAAAGTGTACTATTACGTGGGCGAGCAGCTCGAAATCGGATGTCGGATGGCGGTGCCCAGCCTGTCAGAATGTCCTCCAAGAGCTGCCGCGAGAGTACCTCTGCTTTTGCGGAAAACTCAAGAACCCTCCGGTGTCCCGCACAGAACTGGCACACAGCTGCGGCGAGGTTTGTTGCCGGATTGAAGGCTGCAGCCACGCTTGCACCCTGCTTTGCCACCCGGGCCCCTGTCCCCCGTGCCAGGCCAACGTGGTGCGCAGCTGTGGATGCGGGCGCAGCTCCAAGACCATGCAGTGCGCCATGAAAGAAGATCTTCTGTGCGGTGAGATCTGTGACAAGGTGCTCAACTGTGCCGAGCATCGGTGCCGCGCCGAGTGTCACGCGGGCAAGTGCACAGCCTGCGCGGAGCAGGTGGAGCAGCACTGCCACTGCGGCAAACAAGAGCGCCATGTGCAGTGCACCCGCGAAAACCAAGACAAGCGAAGCTACTCGTGCAAGGAGAGTTGCGGGAAGCCTCTGCCATGCGGCAACCACAAGTGCAAGGACTCGTGTCACGCAGGCAGCTGCAGGCCTTGTAAGCTGAGTCCAGAACAGATAACTAGCTGTCCGTGCGGCAAGATGCCCGTGCCGGTGGCCCAACGTTCGAGCTGCCTAGATCCCATACCAACATGTGAGGGAATCTGCTCGCGGACGCTGCGCTGCGGAAAGCCCGCTCATCCGCACCAATGCGCCAGCAACTGTCACCTGGGCCAGTGCCCTCCGTGTCCCAAGCAGACGGCCGTGAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCAGGCAGTTGTCCACGCGAGCGGACGACGCCCGCTGCAAGCGGCGCTGCACGAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATAGATCACGCCTGCCCGCTGCCCTGCAACCGGACCCTGAGCTGCGGCAAGCACAAGTGTGATCAGCCCTGCCATCGCGGCAACTGCCCGCCGTGTTATCGCAGCAGCTTCGAGGAGCTCTATTGCGAGTGCGGGGCCGAAGTGATATATCCGCCAGTGCCGTGCGGCACCAAGAAGCCGCTCTGCAAGCGGCCCTGCTCCCGCTCGCATCCCTGCGAGCATCCTCCGCAGCACAACTGCCATTCGGCGGCAACCTGTCCGCCTTGCATGATTTTCACCACCAAGTTCTGCCACGGCGGTCACGAGCAGCGAAAGACCATTCCCTGCTCACAGGCCAACTTTAGCTGTGGGCTGGCGTGCGGAAAGCCGTTGCCATGCGGTCGCCATAAGTGCATAAAGCCGTGTCACGAGGGCGCCTGTCAAAGTGCCGGCGAGATATGCCGTCAGAACTGCACCAAGCCGCGAACAATCTGTGGTCACAAATGTGCGGCCGCCTGTCACGAGGGAATCTGTCCCGAGACGCCGTGCAAGGAGCTGGTTGAGGTTCAGTGCGAGTGTGGTCACCGAAAGCAGAGTCGCAGCTGCCAGGAGCTGGCCAGGGAGCACAGTCGCATTGCCACTGCCCAGCTGGCCTCGTCAATGGCGGAGATGTCGCGCGGAAACTACATGGAGCTCAGCGAAATCCTGGCGCCGGCTAAGACCAGCAAATCAAACCGCACTCTGGACTGCAACGATGAGTGTCGGCTACTGGAGCGTAATCGTCGCCTGGCTTTTGCCTTGTCATCGGGAAGCGCAGACACGAAGCCAAAATCGCTGACCAAGTACTCGGAGTTTGTTCGCGGTTTTGCGAAGAGGAATCCGGCTCTGACCAAGAGCGTGTACGAAACATTAAGCGATCTGGTGAAGCTGGCAAAGGAGAGCAAGCAGCGTTCGCGGAGTCACTCCTTCCCCACAATGAACCGAGAGAAGAGGCAGTTGGTGCACGAGCTGTGCGAAATATTTGGCATTGAATCCGTTTCCTACGACAAGGAGCCCAATAGGAATGTTGTGGCCACCGCCCATAAGGAAAGGTGCTGGCTGCCTGCCACGAGCATCATGGAGGTGCTGGCTC
Protein Sequence: QAISGLRCGRPSAIETPGKLTPIRIRLSTSQRRSQGEEKEVLQESGGGGRSGLTSAMDEYWQQLTNGVARGGPATNESAVIYNGHGHEAAEQASGSSASGATSNSNNNYVNFNQFIQQHNLGGGSSPTASAATMQHPLSSGNNTNYNIGGGGGAFGLNPPVAPSVNSNSFGHLYSQPIFPAYQNGESAASFTNSYDDTFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLSLNETPAATTPNGNRNITASQETAINVTGTRTPQPGGIGGLGGVSERGDPHHLRLTVNSYERDRGDRDSRPGSTRQQRRSDYRDDREDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKHQTTQQQISPRRALPPPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEDLLCGEICDKVLNCAEHRCRAECHAGKCTACAEQVEQHCHCGKQERHVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPVAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCASNCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMIFTTKFCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGACQSAGEICRQNCTKPRTICGHKCAAACHEGICPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKSNRTLDCNDECRLLERNRRLAFALSSGSADTKPKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00489062;
80% Identity: -