Dlac002227.1
Basic Information
- Insect
- Drosophila lacicola
- Gene Symbol
- stc
- Assembly
- GCA_035045355.1
- Location
- JAWNPB010000028.1:1741888-1745730[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.4 1.4e+04 -3.6 0.5 15 18 357 360 356 361 0.79 2 16 2 1.9e+04 -4.1 1.6 15 19 384 388 383 388 0.81 3 16 0.056 5.4e+02 0.8 2.0 4 11 417 424 416 425 0.90 4 16 5.8e-07 0.0056 16.8 15.1 1 19 429 446 429 446 0.93 5 16 1.7 1.6e+04 -3.9 0.9 6 10 472 476 471 476 0.88 6 16 2.2e-08 0.00022 21.3 13.6 1 18 482 499 482 500 0.98 7 16 2 1.9e+04 -6.2 4.1 7 13 504 510 504 511 0.77 8 16 2e-09 1.9e-05 24.7 12.9 1 19 540 558 540 558 0.98 9 16 1.1 1.1e+04 -3.3 0.5 5 10 588 593 588 593 0.90 10 16 2.4e-05 0.23 11.6 17.0 4 19 606 621 599 621 0.88 11 16 0.065 6.3e+02 0.6 11.7 1 11 661 671 661 683 0.79 12 16 2.8e-10 2.7e-06 27.4 15.1 1 18 688 705 688 706 0.97 13 16 2 1.9e+04 -4.4 1.2 6 10 735 739 735 739 0.88 14 16 2 1.9e+04 -7.5 10.6 10 18 753 762 742 763 0.78 15 16 2e-07 0.002 18.2 15.0 1 16 799 814 799 824 0.93 16 16 5.4e-07 0.0052 16.9 12.9 1 19 831 850 831 850 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAGTattggcagcaacagcagcagcagcagctggtaaCGAACGGTGCTGACGCAGCGCCTGCTGCGGACGCCTCAAGCACAGCGAAtgggcacaacaacaacaacaactatgtgaattttaatcaatttatcaCACAACACAACTTGGCCAGCTCCAATGTGGGCTACAGCattggcggtggcggcggcgcctTTGGCCTgacgcccagcagcagcgccaccaGCAAtttcggcggcggcggcggcaacTTGTATGCGCCAACATTTTATGCCTCTCAAAATGGCGATGGCGCCGCAAGCGGTAACAGTTATAATGCAGCCGCTGCTTATCCGAATCTTTATACACCTTTTGGAAATAATCcgtttgctgccgctggcgttgGCTACGATTTCAGCGCTTCCAAGCTGCAGGCCACAGCGCCCGAATTTGTGCCCAATTTTGCCAAGCTCAGTCTGACGTCGGCGTCAGAGacgacggcaacggcggcggcttCGCCGTCAGCGTCGGCGTCTATCAAAaatcataacaacaacaacaacaacaacactgcCACACagccaaatgcagcagcagcaggcagcaattCTTCACAGCactcgcagccgcagcagctgccacaaagAGCCGACCAGAGGCAGCCGCGGCCGcatggcagcggcaacaatagCCGCCAGCAGCGACGCAACGACTACCGCGAGGATCGCAACGAGGAGCGCTATGAGCGCGGCAAGAAACCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAATAAGCGACGCGACGATTGGAATCGCAATCGGGATCGCATCAATGGCTATCCGCGCGCCAACGAGGAGCTGGacacaagcaacagcaatgaCAGCGCGCAGCCGTCGCCAGAGAAGCAgtcgtcgcagcagcagctgcaccagcagcagcagcaacaaatctCACCAAGACGCGCGCCCGATCATGAAAAGCTGTCGCAGCGGGAAAAGCTAATGCGCGACATTGAGCAGCGGCGTCTGGAGTGCCTCGTTTGTGTGGAGCTGATTAAGGCGCATCATGGCACCTGGTCGTGCCAGAATTGTTATCATGTACTGCATCTGAAGTGCACCATCACCTGGGCAAGCAGCTCGAAATCGGCCGAGGGCTGGCGCTGCCCCGCCTGCCAGAATGTGCTGGAGGAGTTGCCGCGCGAATATCTGTGCTTCTGTGGCAAACTCAAGAATCCACCGTTGACGCGCACCGAGCTAGCCCACAGCTGCGGTGAGCTGTGCTGCCGTGTCGAGGGCTGCAGCCATGCGTGCACGCTGCTCTGCCATCCCGGTCCGTGTCCGCCATGCCAGGCGAATGTCAGtcgcagctgcggctgcgggcGCACCTCCAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGCGAGGCGATTTGCGACAAGCTGCTCAACTGCGGCGAGCATCGTTGCCAGCAGCCGTGCCATGCGGGCAAGTGTGAGGCGTGCGCGgagcaagtgcagcagcatTGCCATTGCGGCAAACAGCAGCGCGAGGTGCAGTGCACCCGCGAGAGCCAGGATAAGCGCAGATATTCGTGCAAAGAGTGCTGCAGCAAGCCGCTGCCGTGCGGCAATCATAAATGCAAGGATTCATGCCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCACACAAATCACCAGCTGCCCCTGCGGCAAGCTGCCGGTGccggcagcgcagcgcagcagctgcctggATCCGGTGCCCACCTGCGAGGGCGTCTGCGGCAAAACCCTGCGGTGCGGCAAACCCGCCCATCCGCATCAATGCGCCAGCAAATGCCACCTGGGCCAGTGTCCGCCCTGCCCCAAGCAAACGGCGGTCAAGTGCCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGCCAATTGTCGACCCGTGCGGACGATGCGCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGATATCGATCACGCCTGCCCGTTGCCCTGCAATCGCACGCTCAGCTGTGGCCGGCATAAATGCGATCAGCCCTGTCATCGCGGCAATTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGTGAGTGCGGCGCCGAGGTCATTTATCCGCCGGTGCCATGCGGCACCAAGAAGCCCATCTGCAAGCGACCCTGTTCGCGGACGCACGGCTGCGAGCATCCGCCACAGCACAATTGCCATGCGGCGTCCAGCTGCCCGCCCTGCATGATGTTCACCACCAAGTGGTGCCATGGCAATCACGAACAGCGCAAGACCATACCCTGCTCCCAGGCGAGCTTTAGTTGTGGCCTAGCCTGCGGCAAGCCGCTCGCCTGCGGGCGCCACAAATGCATACGGCCCTGTCACGAGGGCGAATGCCAGCAGCCGGGCGAACTGTGCCGCCAGAGCTGCACGAAGCCGCGTTCGTTGTGCGGCCACAAGTGCGCGGCCGTATGCCATGAGGGCGTCTGTCCTGAAACGCCCTGCAAGGAGCTGGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAGCTGGCACGGGAGCACAGTCGCATTGCCACCGCGCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAGATTCTGGCGcccaacaagaacaataaatCCAACAAAACcttgAACTGCAATGATGAGTGTCGTCTGTTGGAGCGCAATCGTCGCTTGGCTATTGGATTGCAGTCGCGTAATCCGGAGACGCAGCTCAAGTCGCTGACAAAGTACTCGGAATTCTTGCGCGGCTTCGCCAAACGCAATCCGGCGCTGACCAAGAGCGTCTACGAAACACTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAAAAGTCGAGAAGTCACTCGTTTCCCACAATGAATCGTGAGAAGCGTCAATTGGTGCATGAACTATGCGAAGTTTTTGGCGTGGAGTCTGTTTCCTACGACAAGGAGCCCAATCGTAATGTGGTTGCCACAGCGCACAAGGAGCGGTGCTGGCTACCAGCCACTAGCATCATGGAGGTGCTGGCACGTGAATCTGGACAACGTCGCGTGCCCGTGCCCAGCAACAATGCATGGAGCCTCAAAAAGTAG
- Protein Sequence
- MAEYWQQQQQQQLVTNGADAAPAADASSTANGHNNNNNYVNFNQFITQHNLASSNVGYSIGGGGGAFGLTPSSSATSNFGGGGGNLYAPTFYASQNGDGAASGNSYNAAAAYPNLYTPFGNNPFAAAGVGYDFSASKLQATAPEFVPNFAKLSLTSASETTATAAASPSASASIKNHNNNNNNNTATQPNAAAAGSNSSQHSQPQQLPQRADQRQPRPHGSGNNSRQQRRNDYREDRNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRANEELDTSNSNDSAQPSPEKQSSQQQLHQQQQQQISPRRAPDHEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQHCHCGKQQREVQCTRESQDKRRYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPAAQRSSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHPPQHNCHAASSCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRPCHEGECQQPGELCRQSCTKPRSLCGHKCAAVCHEGVCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLNCNDECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- -
- 80% Identity
- -