Dlac002853.1
Basic Information
- Insect
- Drosophila lacicola
- Gene Symbol
- dsx
- Assembly
- GCA_035045355.1
- Location
- JAWNPB010000049.1:1383325-1384359[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.7e-25 4.7e-21 74.5 9.9 2 47 41 86 40 86 0.97 2 3 4 1.9e+04 -20.0 17.7 11 12 131 132 119 144 0.52 3 3 4 1.9e+04 -9.7 7.1 11 22 212 223 210 227 0.56
Sequence Information
- Coding Sequence
- ATGGTTTCAGAGGAGAATTGGAACAGCGACACCATGTCCGACTCGGACATGATCGACTCGAAGAACGATGTGTGCGGCGGCGCGTCCAGCTCCAGCGGCAGCTCCATATCGCCACGCACGCCGCCGAACTGTGCGCGCTGTCGCAACCACGGGTTGAAGATCACATTGAAGGGCCACAAGCGGTACTGCAAGTACCGCTATTGCACCTGCGACAAGTGCCGCCTGACCGCCGACAGGCAGCGCGTGATGGCGCTGCAGACGGCGCTGCGGCGCGCCCAGGCGCAGGACGAGCAGCGATCGCTGCACATGCACGAGGTGCCGCCGCCGGCGGGCTCCACAGCCGCTCTGCTCAGTCATCACGGGCATCATCATCACGTGCACGCGCACgcccacagccacgcccatgcGCACCACGGGCATGGCCATCATGCACACGTgctgcaccaccagcagcaggccGCAGCGACGGCAGTGGCAGCTGCCCCGCCGCCCCAGCCGCAAACGCATCTGGGCGCTGCCCATAACGGCTCGGCGGGCAGTCTGCATGGCCACGCCCATGCGCACGCCCATGTGCATCACGCTCACATGGCCAGCACCGCTGTCGCCTCAGtggtgcaacagcagcagcagcagcaccaccaccagcagcagcaacagcagcaccagcaccaccaacaCAGCAACCAccagcagccacagccgcagccgcatcAGGCATCGCTCCGATCTCCCTCACACAGCGATCATGGCGGCAGCGTGGGCGCAGCCACCAGCAGCTCCGGTGGCGCCAGCTCCAGCAATGTGGCAGCTGCCTCAAGCAGCGGCACGGCTGGAGCAGGCGCCGGCAGTGGTGGCATTAGCGTCATAACCAGCGCTGATCAGCACATGTCCACGGTGCCAACGCCCGCACAGTCCCTGGAGGGTTCCTGCGACTcatcatcgccatcgccatcgtcCACATCGGGCAACGCCGTTCTGCCCATCTCCGTGTCCAGCACACGCAAGAATGTGCCACTGGGTAAGTGCTCAAGCTAA
- Protein Sequence
- MVSEENWNSDTMSDSDMIDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKYRYCTCDKCRLTADRQRVMALQTALRRAQAQDEQRSLHMHEVPPPAGSTAALLSHHGHHHHVHAHAHSHAHAHHGHGHHAHVLHHQQQAAATAVAAAPPPQPQTHLGAAHNGSAGSLHGHAHAHAHVHHAHMASTAVASVVQQQQQQHHHQQQQQQHQHHQHSNHQQPQPQPHQASLRSPSHSDHGGSVGAATSSSGGASSSNVAAASSSGTAGAGAGSGGISVITSADQHMSTVPTPAQSLEGSCDSSSPSPSSTSGNAVLPISVSSTRKNVPLGKCSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00572615;
- 90% Identity
- iTF_00490795;
- 80% Identity
- -