Basic Information

Insect: Drosophila kurseongensis
Gene Symbol: -
Assembly: GCA_018153305.1
Location: JAECXX010000005.1:3554620-3558235[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 6.8e-05 0.005 17.2 1.6 1 23 332 354 332 354 0.93

2 9 1.7e-08 1.2e-06 28.5 2.6 1 23 360 382 360 382 0.98

3 9 6.9e-06 0.00051 20.3 0.8 1 23 388 410 388 410 0.98

4 9 4.9e-06 0.00037 20.7 1.0 1 23 416 438 416 438 0.97

5 9 2.4e-05 0.0018 18.6 1.4 2 23 533 554 532 554 0.96

6 9 2.6e-09 1.9e-07 31.1 1.6 1 23 560 582 560 582 0.98

7 9 0.0031 0.23 11.9 0.9 3 23 590 610 588 610 0.97

8 9 8.6e-05 0.0063 16.9 0.9 1 23 616 638 616 638 0.99

9 9 8.2 6e+02 1.2 0.6 1 13 645 659 645 663 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	6.8e-05	0.005	17.2	1.6	1	23	332	354	332	354	0.93
2	9	1.7e-08	1.2e-06	28.5	2.6	1	23	360	382	360	382	0.98
3	9	6.9e-06	0.00051	20.3	0.8	1	23	388	410	388	410	0.98
4	9	4.9e-06	0.00037	20.7	1.0	1	23	416	438	416	438	0.97
5	9	2.4e-05	0.0018	18.6	1.4	2	23	533	554	532	554	0.96
6	9	2.6e-09	1.9e-07	31.1	1.6	1	23	560	582	560	582	0.98
7	9	0.0031	0.23	11.9	0.9	3	23	590	610	588	610	0.97
8	9	8.6e-05	0.0063	16.9	0.9	1	23	616	638	616	638	0.99
9	9	8.2	6e+02	1.2	0.6	1	13	645	659	645	663	0.85

Sequence Information

Coding Sequence: ATGGCCATAAACTTTTCGGCTTCCTTTGCAGCCTGCATAGCAGCCGGACTGAAGGTGCCTCGCCAGATCATGTACTGCATTACCCAGGACACGGGCCAGCCGTACGTGCTCTACAAGGACTCGCAGGACGCGGAGCGCAACCCCGGTGCCATAGGCGCCAGTCCCGCCCAGTGGGGCAGCGACATGTACCCCAACATTCAGCAGCAGGCCCAGCAGCACCTCACCGCCCAGCAGCAGCAGCAGCAACAGCAGCAGCAGAACGCGGCGCAGGCAGCTGCCCAGGCGGCAGCCGTGGCGGCGGCAGCGGGACAACCGCAGAGTCCTCCTGGCGGCGGTCAGGAGACCCGGGACAACGGCAGCGGCGACGGACGTCAGCAGCAGGTGTCGCCCTCCTCGAGTCCGTATCCCTCCGTGCAGCAACAGCAGCAGCAACAGCAGAGGGCGAACGGGGCAGGCGACGAGGACCCCATGAATCAGCTCACCAACCAGCAGAACTCCGCGCCCAACCAAAACCAAAGCAGCAATGACCCCCAGCACTCGGGCTCCAATGCGGGCGAGCCGGGCAATCCCCACGTTCAGCAGAACGGTGGACCTCAAAGCGATCCGGGCAATGGGTTCCAGACTCCGGACTACTACGCCCCCCGCCACGCGGCTCCGCAAGGAGGGATGCTAGCACCGCCTGGTTTCCCGCCGCTCCACTATCTCAACAAGAGCGTCCTGCCCATGGAGCAGTCCGGCGGAGGAGGTGGGGGCGCTGGCGGTGGCGAGGCTTACGCACTGCCCGAACTGCTGCCCGCCCAGCAGAACGGCCAGCAAAACGCCGGACCAGCGAACGCCAATGCCAATGAAGGCGGTGCGGGAGCCAACGGCGGAGTGGGCGGAGCGACGGGAGCGGGCGTAGGCGTGGGTTCTGTGGGCGTGACGAGCAGCGGGAGGACGGGCAACGGCCCAGGACGCCCGCACAAGAACAAGCCGCACAGCGACCTACGGCTGTTCAAGTGCCTAACCTGCGGCAAGGACTTCAAGCAGAAGAGCACGTTGCTGCAGCACGACCGCATCCACACGGACGCGCGTCCCTTCCCGTGCTCCGAGTGTGGCAAGCGCTTTCGCCAGCAGTCGCACCTCACCCAGCACTTGCGCATCCACGCCAACGAAAAGCCCTTCACCTGTCCATACTGCTCGCGCAGCTTCCGGCAGCGCGCCATTCTCAACCAGCACATACGCATCCATTCGGGTGAGAAGCCCTTCGCCTGCCCCGAGTGCGGCAAGCACTTTCGCCAGAAGGCCATCCTCAATCAGCATGTGCGCACCCACCAAGACGTCTCGCCACATCTCATCTTCAAGAACGGGCCGCACCCGACCCTGTGGCCCTCGGACGTGCCCTTTCCCGGCGAGGACAACGACACCAAGGGGGACATTGCCGGCACGGGCGGCGGCTACCACGACGAGGACTCCCAGGGAACGCCGGACGGCAGCGGCGGAATGCACTACCCCTCTTACTTTAAAGACGGCAAGGACCCTCGCACAGGCCAAAAGATACTGCCCGAGGTCCTGCAGCACATCGGCGTGAGGCCGGCGAACATGCCGCTCTACGTGCGGTGCCCCATCTGCGACAAGGAGTTCAAGCAGAAGACGACTTTGCTGCAGCACGGCTGCATCCACATCGAGTCGCGACCGTATCCCTGCCCTGAGTGCGGCAAGCGCTTCCGCCAACAGTCGCACCTCACGCAGCACCTGCGCATTCACACCAACGAGAAGCCCTTCGGCTGCATGTACTGTCCGCGCTTCTTCCGCCAGCGGACCATCCTCAACCAGCACTTGCGCATCCACACCGGCGAGAAGCCATACAAATGCGGCCAGTGCGGCAAGGACTTCCGGCAGAAGGCCATTCTGGACCAGCATACGCGCACCCACCAGGTAGGAGATCGCCCCTTCTGCTGTCCGATGCCAAACTGTCGTCGGCGCTTTGCCACGGAGAACGAGGTCACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCCCAGGTGGCTTCGGTGGCCAATCACCTGATGACCGACGCCAAGAGCCTGGCAGCCCAGCAGTTCCTCAACAACAACAACCCGTCGACGGTGGACAACAAGGCCAACATCCTTCCGGTGCGCAGTATAGCATCCAACGTAGCGGCCGCCGCCGTCGTCCAGCAGTCGGTGGTAAAGAACGAGCTCTACTTCCCGCAGTGCTACGGACCGCCGTTCCAGCATCCCTTCCAGACGCAGCAGGCCCAGCAGCCTAGCGTGGCTCACGCCAACGGAGTTCCCACGCCGCCAGTGACCGTGACGGTGGCCAACTCGGTGTCCTCAGGCGTGGTGGTGCAGCAGAACGCTTCCGCCTCCGTGGTGGCCCAGTGA
Protein Sequence: MAINFSASFAACIAAGLKVPRQIMYCITQDTGQPYVLYKDSQDAERNPGAIGASPAQWGSDMYPNIQQQAQQHLTAQQQQQQQQQQNAAQAAAQAAAVAAAAGQPQSPPGGGQETRDNGSGDGRQQQVSPSSSPYPSVQQQQQQQQRANGAGDEDPMNQLTNQQNSAPNQNQSSNDPQHSGSNAGEPGNPHVQQNGGPQSDPGNGFQTPDYYAPRHAAPQGGMLAPPGFPPLHYLNKSVLPMEQSGGGGGGAGGGEAYALPELLPAQQNGQQNAGPANANANEGGAGANGGVGGATGAGVGVGSVGVTSSGRTGNGPGRPHKNKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKDPRTGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQVGDRPFCCPMPNCRRRFATENEVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQVASVANHLMTDAKSLAAQQFLNNNNPSTVDNKANILPVRSIASNVAAAAVVQQSVVKNELYFPQCYGPPFQHPFQTQQAQQPSVAHANGVPTPPVTVTVANSVSSGVVVQQNASASVVAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00546100;
90% Identity: iTF_00507751;
80% Identity: -