Basic Information

Insect: Drosophila kurseongensis
Gene Symbol: -
Assembly: GCA_018153305.1
Location: JAECXX010000005.1:27952088-27953724[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.3e-16 4e-13 48.8 0.0 2 45 352 395 351 395 0.96

2 3 0.034 58 3.5 0.0 28 39 425 436 420 440 0.88

3 3 3.3e-20 5.8e-17 61.1 0.0 2 42 461 501 460 503 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.3e-16	4e-13	48.8	2	45	352	395	351	395	0.96
2	3	0.034	58	3.5	28	39	425	436	420	440	0.88
3	3	3.3e-20	5.8e-17	61.1	2	42	461	501	460	503	0.96

Sequence Information

Coding Sequence: ATGAATCATCTCAAGTGGATGGGGCACTCGTCCACTATAATGGATATACAGCGCTCGCTGCGCAACGACAACGGCAGCTGCGAGGTGGTCCTGGCCTCCAGGGACGGTGTCCGAGTGCGCGCCCATCTCTTCGTGCTGAGCACTTGTAGCGAGCTGATGCGCAACCTCCTGGTGGATGTTCCGCGTGGCCAGGAGGCCACCATCGTGCTGCCCGACATCCGTGGAGATCTGCTAGAGAGCATGCTTTCCTTCATCTACATGGGCGAGACCAGCCTGCCCTCTGCCTCGCTGTCCGAGTTCCTGGAGGCCATCAACCTGCTGGGCATTAAGTCGGCCATCAGCTTCGAGTGCAATCCCTCGGCCAGTCCGCCCAACGCCGCCGATGTGGAGAACAGTCCGATGGCCGTGGAGTCGGCCAAGTCGATAACCGGCCTTCAAATCGCGGAGGCGGAGCTATTGGACGAGGACGAGGAAGAAGAGGCACAGCCGGCAGACGCCGTGCCTGCAACTGTCCTGGCGGAGGCCCAGCATCAGCCCACCCACTCCAGTCGCTCGCTGGAGTATCTGGATGTGTACGAGCCTCCAAAGATAACCTACTCCATCGAACATATGGACGGCAATTCGAACGGCAATCAGTTTATCCTCACCGAAAACACTGGCACCTTTACCATAACACAGTCGACTTCTAGTTTGACCAAGATGGAAGCTGATGAAACTGCCACCAGTGGCGCTGAAGTGGAGCTGGTCGACGATGATGTGGACGCGGACATCACTGAGGATTCAGAGGAGCATGAAACACAAATGATCGAGGAGGAATTCGCGCAAACCGATCCACTGATCGAACTAAGTGCTGCTACGGAAATGGACGACGAAGAAGACGCGCACGACGACCTGGCCGACGAGGAGATAGAGGATGAGAAGCCTCGCAAGTTGGGTGGAGGAAAGCCGCGCACTCGTCGCCCTATTAATACCAAATCTCCTAAGCGACCGCCCAGTAAGCCAACGCGACTGCAGCAGTTTGTAGCGCTCAAGAGGGAAGTGAAGGACGATATCAACGACGCTTTGGATTTGGCAGCCGACGCAGTGATCGTCGAGGGATTGAGCCTGCAGAAGGCTGCCGACCGATTCGACATCTCTAAAACGGTCCTTTGGCGCCGCGTGCGCAACAATCCCGCCTACATGCGGAACAACCGGGAAAGACCGTCGCTGCTAGAGGCTTACGAGCGCCTGAAGAACGGGGACTCGCTGAAGAGCATCAGCACGGAACTGCAGATTCCCATGTCCACACTGCACCGGCACAAGATGCGCCTATCGGCCCAGGGACGTCTGCCCGACTTCGTGGCCTGCCGCCGGCGGGACACCACGCCAAAGGACGAGCTGCGGGACAAGTTGGCCAAGGCCGTGCATGCCTGCATGAATGAGGGAATGTCCCAGAACCACGCGGCCAACCTCTTCGAGATCCCCAAGAGCACGCTATGGCGACACCTGCAGCGACGTATGAGCAACGGCGATCGAAAGGTCAAAAAAGAACTGCAGGACGAGTACGAGGACGATATGCTAACCTAG
Protein Sequence: MNHLKWMGHSSTIMDIQRSLRNDNGSCEVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEATIVLPDIRGDLLESMLSFIYMGETSLPSASLSEFLEAINLLGIKSAISFECNPSASPPNAADVENSPMAVESAKSITGLQIAEAELLDEDEEEEAQPADAVPATVLAEAQHQPTHSSRSLEYLDVYEPPKITYSIEHMDGNSNGNQFILTENTGTFTITQSTSSLTKMEADETATSGAEVELVDDDVDADITEDSEEHETQMIEEEFAQTDPLIELSAATEMDDEEDAHDDLADEEIEDEKPRKLGGGKPRTRRPINTKSPKRPPSKPTRLQQFVALKREVKDDINDALDLAADAVIVEGLSLQKAADRFDISKTVLWRRVRNNPAYMRNNRERPSLLEAYERLKNGDSLKSISTELQIPMSTLHRHKMRLSAQGRLPDFVACRRRDTTPKDELRDKLAKAVHACMNEGMSQNHAANLFEIPKSTLWRHLQRRMSNGDRKVKKELQDEYEDDMLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00605685;
90% Identity: iTF_00494306;
80% Identity: iTF_00529667;