Dkun011872.1
Basic Information
- Insect
- Drosophila kuntzei
- Gene Symbol
- -
- Assembly
- GCA_035042165.1
- Location
- JAWNLU010001560.1:487184-494173[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.042 3.1 8.6 0.5 1 23 1322 1345 1322 1345 0.95 2 13 8.2 6.1e+02 1.4 0.2 1 23 1515 1537 1515 1537 0.91 3 13 0.00018 0.014 16.0 2.7 2 23 1540 1561 1540 1561 0.97 4 13 7e-05 0.0052 17.3 0.2 3 23 1569 1589 1567 1589 0.98 5 13 5.8e-07 4.3e-05 23.9 4.1 2 23 1596 1617 1595 1617 0.97 6 13 5.2 3.9e+02 2.0 0.4 5 23 1630 1648 1627 1648 0.95 7 13 1.4 1e+02 3.8 5.4 3 23 1655 1676 1653 1676 0.93 8 13 0.15 11 6.9 0.2 2 23 1687 1707 1686 1707 0.96 9 13 5.6e-05 0.0042 17.6 0.4 1 19 1713 1731 1713 1735 0.95 10 13 1.6e-05 0.0012 19.3 0.5 1 23 1743 1765 1743 1765 0.98 11 13 0.0001 0.0078 16.8 7.6 1 23 1771 1793 1771 1794 0.96 12 13 0.0002 0.015 15.9 5.9 1 23 1799 1821 1799 1821 0.98 13 13 0.029 2.1 9.1 8.2 1 23 1827 1849 1827 1850 0.95
Sequence Information
- Coding Sequence
- ATGGTTGACAGTGTGCAGTGTCCCGTGTGCACCTTGTATCTGCACGCGGGCATGAATCTCTCGGATCATCTGGAGACACATCCCAAGGAGCAAGTCATCAAAGCCCTGGTGCAAATGACAATCGTCGGCAACAATGCAATGGGCGGCGCCCTGGCGGCAGCCGCGCTCTCCACTGCCGGCAGTGGTGCATCATCAGACGGCGCCTCCTCTCCATCAACGCCAGATGCTGATGTGAAACCAGCTGTGGCAGCAATCGCACCACCAGctgtaacagcagcagcagcagcagcaacgacaacaacagcaccaccaacaccaccaacagcagctacagcaacaacagcaacaccaacattAAAATCAACAGCACCCAAAGCTGCATCATTGCTGGTGAATGCAAgtatcaacaacagcagcaacaataacagcaacagcaacaataacaaattgagCAATCCACCGATAAAGGCAGTTAAAAGCGCGCCACCCTCGACTGAGGCGTCAGCCACCACCACCACATCCACCACACCCACCATAAGCAGCGTGGCCGCTGTCTATCCGCCATCGCTGACATCTGACTATCGCTTcaatcagcaacagcagcagcaacaacaacaacaacaggcgaCGCCATCGGCAAGTCTTCATAGCTTTCCACGTGGTGCTACGACAATGCTGGTGATACCACAAGCAgcacaacatcagcagcagcagcagcatcatttCCTGGCCACCCAACAACCTGGTCATTTTGcccatcagcaacaacagcagcagcagcagcaacaacagtcggCTATGAAGTACACGTATGCAACAACGTTGCCTCCGCCACCGCCGCCTCTACAGCTCTTTGCACAGCAGTCGACATCTTCGCAGTCACATCAGAATCCACCGCCCGCTTATGGCGCCGCCATCAGTCAAATTCGATCTCAGCACAACCAAAAcaagcaacatcagcaacaacaacaacaacaacaacaacatataaCCGTACAGCATAATGTTAACCTGGCACCACCGAGTGGGAAGCACAGCAAAGTTCATACGGAGATCTTTCTGAatccaccgccaccaccaccgtCACAGTCCACGATGCCGTCTTCATCGACCTCCTCGTCCGCAACCGTgtccgcctccgcctccgcgTCCGTCTCCGCCTCCTCCTCAAGACTGCAACATCcacaacagcatcagcaatcCCTTACAGCCGGCAGCAGCTATGCAACCGCCAGCTGCTCCAGTTCCACAGTGAGTCTGATTTCAACGACAAGCGGACGAGGCAGCAGTCGCCAATCGACCAATTCACCATTTGGTGCACTGCTCAATGCGGCGGCACAGGCTGCCAGCTCCACAACCGCCACTTCCAGCGCATCTGTGCTGCGTTATGCCGAATCGCCGGTCGCCCACTATCTGGAGCGGGAGAATGGCGATTTTATATTCCAGGAGACGCCCAAACACATTGTCGAGTGCGTTGAGAAAGATGATGGCGAATTCTCAGTGATTGAGCGCATCTATCAGTCGCCACCCAGCGTGCTGCACATACACGACGATgatgaggaagaggaggaaCATAGCTGGGTAAACAGCGACGATGAGGATCACGTCAAGGCGCATAACCATGTGGAGGATGGCGACGATGAGCGGGAGGACAGCCGCAGCAGAGTTGGCCTTAAGACGACAACGAAAAAGTCGCGTAAAATCAAATCGAGTGGAAGAAGCCACAAACGCGCATCGTCCAAGCATCAGATGATTACGACGGACGATGAGGAAGAGTTCATGAGTTTGGGCAGCAGTGAAAACGAGGAGCAGACAGAGGAAGAGTCGCCGCTGACAGCTAGTGCAGGTGGACAACAGGTGTCGTCACCGTCTCCGCCTCTACTTTGCCTGGCGCCTTCGACGAGCAGTGgagctgctgcagcagctTCTGGCAGTGCCAATTCCATGTCCAGCGGCACCATTAAGTCCAAAAAGAATCGTGTTACAGTTCTGAGTGATGTGCCGCTCAATATGAATGAGTATCTGGATTTGGTGGGCAACATTGTGGCATCGAGTCGCATTGGCGCAGTGCGTCCATTTGCCACTGTGGCGCCTATTCCGTTCGTCAAGGTGGAGAAGGAGGAACCGTTGGATGAATATGACAGTGTTCAGAACGAGACCATAGAGAACAAGCCCAGCGTAGAACATGTCGGTGGCAgtagtagcagcagcagcagcaatggaCACGGCACCACCAGCGTCATTCGCATGGCCAGCACCAGCACCAGCGCCAATGTTCCGCCTGAGGATCTCACACAGCCGCCGCCTATGAAAGTCGAGGTGGAGCCAACAATGCTGCTGCCACAACGATTCTCAGCGCCGGCGCAGCAGCGTGGACCCAAGAAATTAGTCATCAAACCAAAGGCGACAGCaacggcgactgcgacgacgacgaaaaAGACTGATAACAATGCTGCCAGCAtgagaagcagcaacagcgccGAATCTCTCAGCATATCAAAAGCGTCTGCAGATCTGGTGCAGATCAAGAGCGAGAATGTGGAGCCATCCACATCGAGTGGCAGCATCTTGGAGAAGCATCTGACCACCAGCTACACTGGGCAACAGTCACGCAAGCACTCGACAGTCAACGATGACGATGCTCGTGTGCTGCTGGAATTTGCCAACTCAAAGCAACAACCGTCGGCGGGCAACAGCAATCCCACCACATTTGTGGTGAATGCTGCCAGTTTTGCATCGGCGGGATCGGTATTTGCCAGCAATATGCAGAAGCAGCCCATCCAGCCGGGTGACGAGTACATTCTGCCCGATGATAACAAAGTGGAAATGGATGAAATTGTGATATCCTCATCGTCTTCCTTTGCCTCCTCCACGCAGCAAGcagcgcaacagcaacagcaatcgcAGTCGCATCCACAGGCAACTCCACAGGCGGTTCAAGCCATGTTGCAGCAGGCACAGCCGCCAACCTTCAATGACTTTAACTTTCTGTACCATCaaaacacaacagcaacatcaacaccaacagcaacgacaCCGACTGCTTCCAATTTTGCACCATTCGGtcttcagcaacaacaaccacttgGTTCCAGCGAATCCACCAATACGGCCTCCAGTACCTCGTCAGTATTGGATCACGAATCCTCAATGAATGCAACGTTCCGTGTGGCCAAGTCACAGTCGCCACTGAGTGCGTGGTATCAGccacagcagccacaacaacaacatcaacagcaacaaccacagcagcaaccacagccgACAACGTCGCAGAATGTGGAACAGTCgagcaatttaattgcagccTTGTCAGCCGTCGATTGTTGCAGTGGGGCGATGGACAGTGATGCGAGTGATGCCAAGTACTTGGATCTGGATGCATGCAAGCGGGAACAGTTGAGCAATAGCAGCAACCATCTGCCCTCTGCCTCGGCATCTACGTCTACCACATCGTCATCATTTGCTGCTGCAGCCACGGAGAGCAGTCTCGTTCGTGGTCTGGGATTGAACATACGCACTGATGAGAAGATGCCCGCCAAGGGTGAAATATCCGAGCAGGAGAGCAACTGTGACATTGAGAACTCCTGGAGTCAATCGATGTATGGGGACATATCACAGCGGTACTTTAGAAACCAGTTCGCGGATGGCTACAATCAACAGCTGACCGATTGGCGACAGGACTATTATCCTGCGCAGGATCTCAGTGGTCAGCAGGAGCAGCGTGAGTACAAACGATTTGATTTCAATGCGGTCGCCTCTGATTACGTGCAGCCGGGTGAGCTGGACGCCACCTCGAGCTCGACCAGGAGCACTCCATTTGTGGATGTGCAGCCCACCACGTCCACGTCGTCATCGGCTTTGTTGGCTGGCCCACCAATAGCCTCGACATCCAGAGCTGCCGCCGAAGCGGAAGCCGTCGCTGCCGCCGCATTGCAACGTAAACCCGCCCGTCGCAAAATATACAAGTGTCCACACTGCGTGGTCATCTTCGAGAAGCTAAAGGATCGCAATGCACACATGATTGAACAGCACAACTACGTGCGCCAGAATCGACGACTCATCTGTGCGCAGACGTTGCTGCTGGCACAGCCCCAggttcaacaacaacaacaacaagcacaacaacaacaacagcagcaacaacagcaacagcagcaacagttgttgctgcagccAGGTGGAAGCATTAGCGAGACACTGCACGAAGATTCCAAGGATGGCATTGTCAAGATCAAACAGGAGCACTGCCAGGATAAGCCCGATTCATCGGAGCAGCTACTTGATAATTTGGAGCTGCCGGATGTGAAAGACGCTGGCTTATTGAACGTTAATGGTGAAAGTGGACGTGATGAGGACGTGAAACCGTCTACCAACGTGGCTGATCTAAAACCGCCGGCAATTACCCCTTTGGCTATGACCACACCAGCTGCCAAGTTGGCGGCAATCTATCGCATGCTGATTGCCTACAATGAGTCGAAGCTGGGGCAAGAACATCACAACCTCAGCGAGCTGGAGCAAAAGGCCATGGAGAAATCCATATTTTTGTGCTACGTCTGTCGCACCGATTTCCCCTCTGTGAAACTGTACGATGCACATCTGACTGAGCATCCCGCCGAGTGCTTCACCTGTGGCAAGAAATTCTATCGCTGGAAAAACTTCTCACTGCATCTGAAACGTCATATCGGCTGGAAGGAGTTCGGTTGCTATGTCTGCGATAAGAAATTCGTTGTGCGCAGTGCCCTCGTCGAGCACATGCGGATGCACACTGGCCAAACCCCATTGAAGTGTAAGATATGCGGTAAAAAGTTCAAGCGTTACTCCAACTTGACTCAGCATCGGAAGCGCCACACCAAAATGACGGTGCGGAAGAAGGAGTACGTGTGTCACTGTGGCGAGGTGTTGCCCTCGAAGGCGCGATTCCTGTGGCATAAGGAAACGCACGATTTGAAGCCCAAGTGCTGTCCATATTGCTGCGATCGTTTTGTGCACGCCAATTCACTGCGCCGACATATCCGGCTGGCGCACTCGGACAAGTTTGACTATGCTGAGCCCATGGAATGCCCCATGTGCAAACAGATATTCGCCAAGACGTCCATTAAGGCACACATGGCAACGCACTCGACGGATCCCCAATACGATTGCGCCATCTGCAACAAGAGCTTCTCCACAAAATGGAATCTCAAGATACATTCGTGGGTGCACGCCAATCGCACCGCCAAACCGTTCAAGTGCGAGTATTGCCCCAAGGCCTTTGTACGCGAGCTGGACTTTAAGAATCACATGAATGCGCACAAGCAGATTAAACCCTACACCTGCGAGTATTGTGGTTGCAAGTTCATACGCAAGTACAACTACATGCGGCATCGGCGAGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAGTCGTTTCATCGACACTACTATCTGATTGAGCATCGTCGCATTCACACGGGCGAACGACCTTTCCATTGCACCATCTGTGGCAAGAGCTCGACCACGAAGACCAATCACAATAAGCATCTGAAGATCCATCATTCGCGCGATCCCTTCACCGTGGAGGTCTAA
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNNAMGGALAAAALSTAGSGASSDGASSPSTPDADVKPAVAAIAPPAVTAAAAAATTTTAPPTPPTAATATTATPTLKSTAPKAASLLVNASINNSSNNNSNSNNNKLSNPPIKAVKSAPPSTEASATTTTSTTPTISSVAAVYPPSLTSDYRFNQQQQQQQQQQQATPSASLHSFPRGATTMLVIPQAAQHQQQQQHHFLATQQPGHFAHQQQQQQQQQQQSAMKYTYATTLPPPPPPLQLFAQQSTSSQSHQNPPPAYGAAISQIRSQHNQNKQHQQQQQQQQQHITVQHNVNLAPPSGKHSKVHTEIFLNPPPPPPSQSTMPSSSTSSSATVSASASASVSASSSRLQHPQQHQQSLTAGSSYATASCSSSTVSLISTTSGRGSSRQSTNSPFGALLNAAAQAASSTTATSSASVLRYAESPVAHYLERENGDFIFQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEEEEEHSWVNSDDEDHVKAHNHVEDGDDEREDSRSRVGLKTTTKKSRKIKSSGRSHKRASSKHQMITTDDEEEFMSLGSSENEEQTEEESPLTASAGGQQVSSPSPPLLCLAPSTSSGAAAAASGSANSMSSGTIKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAVRPFATVAPIPFVKVEKEEPLDEYDSVQNETIENKPSVEHVGGSSSSSSSNGHGTTSVIRMASTSTSANVPPEDLTQPPPMKVEVEPTMLLPQRFSAPAQQRGPKKLVIKPKATATATATTTKKTDNNAASMRSSNSAESLSISKASADLVQIKSENVEPSTSSGSILEKHLTTSYTGQQSRKHSTVNDDDARVLLEFANSKQQPSAGNSNPTTFVVNAASFASAGSVFASNMQKQPIQPGDEYILPDDNKVEMDEIVISSSSSFASSTQQAAQQQQQSQSHPQATPQAVQAMLQQAQPPTFNDFNFLYHQNTTATSTPTATTPTASNFAPFGLQQQQPLGSSESTNTASSTSSVLDHESSMNATFRVAKSQSPLSAWYQPQQPQQQHQQQQPQQQPQPTTSQNVEQSSNLIAALSAVDCCSGAMDSDASDAKYLDLDACKREQLSNSSNHLPSASASTSTTSSSFAAAATESSLVRGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFADGYNQQLTDWRQDYYPAQDLSGQQEQREYKRFDFNAVASDYVQPGELDATSSSTRSTPFVDVQPTTSTSSSALLAGPPIASTSRAAAEAEAVAAAALQRKPARRKIYKCPHCVVIFEKLKDRNAHMIEQHNYVRQNRRLICAQTLLLAQPQVQQQQQQAQQQQQQQQQQQQQQLLLQPGGSISETLHEDSKDGIVKIKQEHCQDKPDSSEQLLDNLELPDVKDAGLLNVNGESGRDEDVKPSTNVADLKPPAITPLAMTTPAAKLAAIYRMLIAYNESKLGQEHHNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHIGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00537699;
- 90% Identity
- -
- 80% Identity
- -