Basic Information

Insect: Drosophila kuntzei
Gene Symbol: -
Assembly: GCA_035042165.1
Location: JAWNLU010001684.1:4649290-4652444[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 9.4e-06 0.0007 20.1 1.4 1 23 223 246 223 246 0.93

2 17 0.00074 0.055 14.1 1.8 1 23 253 275 253 275 0.98

3 17 0.2 15 6.5 0.2 2 23 307 328 306 328 0.95

4 17 0.001 0.074 13.7 2.3 1 23 418 441 418 441 0.97

5 17 0.068 5.1 7.9 0.5 1 19 448 466 448 469 0.93

6 17 0.0042 0.31 11.7 4.3 1 23 478 500 478 500 0.95

7 17 4e-05 0.003 18.1 0.4 1 23 507 530 507 530 0.97

8 17 9.3e-05 0.0069 16.9 1.2 2 23 538 559 537 559 0.96

9 17 0.0037 0.27 11.9 0.1 2 21 586 605 585 606 0.94

10 17 0.0022 0.16 12.6 2.8 1 23 659 682 659 682 0.98

11 17 0.037 2.8 8.8 0.6 1 23 719 742 719 742 0.95

12 17 0.00014 0.01 16.4 1.6 2 23 771 793 770 793 0.95

13 17 0.00062 0.046 14.3 0.2 1 23 807 829 807 829 0.95

14 17 0.00011 0.0085 16.7 1.2 1 23 835 857 835 857 0.99

15 17 3.6e-07 2.7e-05 24.5 2.6 1 23 863 885 863 885 0.98

16 17 1.2e-05 0.00088 19.8 3.8 1 23 891 913 891 913 0.97

17 17 0.0022 0.16 12.6 0.2 1 23 919 943 919 943 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	9.4e-06	0.0007	20.1	1.4	1	23	223	246	223	246	0.93
2	17	0.00074	0.055	14.1	1.8	1	23	253	275	253	275	0.98
3	17	0.2	15	6.5	0.2	2	23	307	328	306	328	0.95
4	17	0.001	0.074	13.7	2.3	1	23	418	441	418	441	0.97
5	17	0.068	5.1	7.9	0.5	1	19	448	466	448	469	0.93
6	17	0.0042	0.31	11.7	4.3	1	23	478	500	478	500	0.95
7	17	4e-05	0.003	18.1	0.4	1	23	507	530	507	530	0.97
8	17	9.3e-05	0.0069	16.9	1.2	2	23	538	559	537	559	0.96
9	17	0.0037	0.27	11.9	0.1	2	21	586	605	585	606	0.94
10	17	0.0022	0.16	12.6	2.8	1	23	659	682	659	682	0.98
11	17	0.037	2.8	8.8	0.6	1	23	719	742	719	742	0.95
12	17	0.00014	0.01	16.4	1.6	2	23	771	793	770	793	0.95
13	17	0.00062	0.046	14.3	0.2	1	23	807	829	807	829	0.95
14	17	0.00011	0.0085	16.7	1.2	1	23	835	857	835	857	0.99
15	17	3.6e-07	2.7e-05	24.5	2.6	1	23	863	885	863	885	0.98
16	17	1.2e-05	0.00088	19.8	3.8	1	23	891	913	891	913	0.97
17	17	0.0022	0.16	12.6	0.2	1	23	919	943	919	943	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCCGTCCTGTGCCGCACTTGCGATGCAAGAGACACGGATAAACTGTACAAGTTGGCGACGGCCACCAAAAGGTTTCCAGATAAACTGCTCTCCGACATTTTAGCTGAATTGACGAACATCGATTTTAACGATGCATTGTCTCAGCGGCTCCCCCAGTGTCTGTGCGGCACTTGCGCAAGAAAACTCATCGGTGCCTATTACTACATAAAACAGGCGCTGGCAGCCAATGAGCTGTTAATGAACCATGTCCACAACAGCGACAAGGCAGTGACCAACAGTGACTGCCTACAGGAGGTGCCCATGGAGCTCTGTGCCGAGCAGCATGTTGAGGTTAAATTGGAAACCGAGGAAGATGAAATTGATAACGATATAACCTGCACAGAACTGCCTGAGTTCACCACAGTACAAAATGCGAATGACAATGTGGACAACACAGTGGAAAGTGATCACGATAACAAGAAATCTACGGATCCATTGACAATGCTTGATTCCGTCAAACAGGAAGAGGATGGCATTCCAGCGAAAGCTGCGATTGTCCAGGAGCATAAATATAAGGCTGATCATGATGAAGACGACTCTCTTGATGATTTGCCTTTACAACAGCGTGTCCAAAAGTGGAAGCAGACGGACAAACTGCGTGGAATTAAGAGACCGATATTTGCGTGCAAGGAATGTCCAAAGAGCTTCAAACGCCCTAGGTATCTTAAGCAGCATTCATCGCGTGTCCAcaagtcaaagtcggattggTACTCATGCTCCTTCTGTATACGAAAGTTTAGCCACAGTGAAGCTCTTCAGGCGCATCTTAAGGTGCACGGAGACTCGAAGCGATCGGCCAATTTGGGCGAGAACAAAAAGGCCAAGGATATTGATGTGAACGTGTGCAAACCACATGGCTACAAGCTCATCGAGTGCATGATCTGTCAGAATCAATACGATAAAATTGCCCAACTGAGACGTCACCTGGAACAGCATCCCGAAATTGTTAACTTCGGTGCACGCTCCAATATGCAACCAAATGAGCTCGCTGAACTGTTTTATCCCGATGCCAAGGATGTGAGCGAGAGTCAATTAAAGCAACTCATACGCAAAGATTTGGCAGCTGGCATTTATCAGCGTTTTTATTCGATAACGAACCAGTCGGGCTACGAAATGGATCTGGACAGCTCCGAAACAGAGAGCGAGGCCGAACTGGATGGCGATGAACTGTCGCGGCAGCAGCGTAGCATTCCCAAAGCCAAATACAGTTGCGAGCTGTGCCAGGAGCGTTATCAACGCAAGTATCAGCTGTATGACCATCAGCGTCAGTCGCATGCCTGGCTGGATGCACCTCATGTCTGTGGTCGCTGTGATGCTCGCTTTGTCAGCCTGCAGCTATTGAGGCATCACAATGAATCGCAGTGCAAGAATTCCCAGAAACGTTTCCTGTGCCACAAATGCCCGTTACGCTTTCGTTGGCGGCACAATCTAAAGGTGCACATAAGGGAGCACAGAATTACAAATCAAACATTCGAGTGTGCCGATTGTAAACGCGTCTTTGACAAGAAGAAATCTCTGACGGTCCATTTGCTGAGTGTGCATGCGGAGCAATCGAAACTGATACCGTGTCAATGGTGTACTCGCAAGTTCTATCGACGGGACTATCTGGTGAAGCATCTGAAGCGGCACGGCATCAGGGAGCAGGATATACCGCTGGCCGAGACACTCATTGCGGCCACATCGAAGCCTAATGGACCCAAACGAATCACCTGTAAGATTTGCAATATGCACTTTGATCGCATCATCGATCTTCGGGCTCATATTCAGCTGGAACTGAAGTTGGCGCTGTCACTGCATCAAAACTACGATTCACTGCACAATTACTCCATAACAAATGAATCTGGATATGAGATGCAGCTTGGCGACTCCGAGACGGAAGATGAAATGCAGATGCAATCAACACCGACGTCAACTCCACGTCTTGTCTACATTTGCGAGCTGTGCAAAGTGCAATGCAGGCGGAAGTACGAGATGATACAGCATCAGCGAACCATGCATCGGTTTGACAAGATGCCACACGAGTGTGAAGTCTGCATCTTTAAGTGTGTCTGCAAGAGCATCATGGACCAGCACCGGCAATCGCAGTGTCACAGCGCGGAGAAGAAATATGCCTGCAGCAGATGCAGCTTTAAATTCATGTGGCCTGAAAATCTGCAGCAACatatgcaactgcaacacggCGGTATGGAACGAGCTCCAAGTGCTGATCGTATACCAGATGATCCAGCCGATCCAGCAGTGGATCCGGCCTTACAGCTACTGCAATGTCCGCACTGTGATCGCACCTATCAAATGAAATCACGACTGAACAATCACATAAGGGATGTGCACATCAATGGGGATCGCAAGCGCAAGGAGGCCATCAAGAAGTTCCTATGCTCGCTGTGTGGCCGCGAAACGCAATCGGCTGCCTCGTTGGTTACCCACATGCGTCGTCACACCGGAGAAAAGCCCTTCAAATGCGATCTCTGCGAGATGGCATTTCCACGGCACTCGGAAATGATATCGCATCGTCGCATGCACACGGGAGAGAAACCATTCCACTGTACCGTATGCGGCAAGGACTTTGCCCGCTCCGACAAACTGAAGCGTCACATGCTGACCCACAGCGGACTGAAGCCGCACAAGTGCACATACTGCGATAAGAGTTATCGCCAGGCCAAGGATCTGAAATTACATTTGCAGCAACACACCGGCGAGTGCCCCTTCATATGTGGCACATGCGGCGAGCGGTTCATTCAAGGCACAGCGCTGGAGAAGCATCGCATGATGCGGCGTCACTTTGACGAGGTGGATGAACGCATCTCAACTCAAGCGTGA
Protein Sequence: MKLPVLCRTCDARDTDKLYKLATATKRFPDKLLSDILAELTNIDFNDALSQRLPQCLCGTCARKLIGAYYYIKQALAANELLMNHVHNSDKAVTNSDCLQEVPMELCAEQHVEVKLETEEDEIDNDITCTELPEFTTVQNANDNVDNTVESDHDNKKSTDPLTMLDSVKQEEDGIPAKAAIVQEHKYKADHDEDDSLDDLPLQQRVQKWKQTDKLRGIKRPIFACKECPKSFKRPRYLKQHSSRVHKSKSDWYSCSFCIRKFSHSEALQAHLKVHGDSKRSANLGENKKAKDIDVNVCKPHGYKLIECMICQNQYDKIAQLRRHLEQHPEIVNFGARSNMQPNELAELFYPDAKDVSESQLKQLIRKDLAAGIYQRFYSITNQSGYEMDLDSSETESEAELDGDELSRQQRSIPKAKYSCELCQERYQRKYQLYDHQRQSHAWLDAPHVCGRCDARFVSLQLLRHHNESQCKNSQKRFLCHKCPLRFRWRHNLKVHIREHRITNQTFECADCKRVFDKKKSLTVHLLSVHAEQSKLIPCQWCTRKFYRRDYLVKHLKRHGIREQDIPLAETLIAATSKPNGPKRITCKICNMHFDRIIDLRAHIQLELKLALSLHQNYDSLHNYSITNESGYEMQLGDSETEDEMQMQSTPTSTPRLVYICELCKVQCRRKYEMIQHQRTMHRFDKMPHECEVCIFKCVCKSIMDQHRQSQCHSAEKKYACSRCSFKFMWPENLQQHMQLQHGGMERAPSADRIPDDPADPAVDPALQLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKKFLCSLCGRETQSAASLVTHMRRHTGEKPFKCDLCEMAFPRHSEMISHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCDKSYRQAKDLKLHLQQHTGECPFICGTCGERFIQGTALEKHRMMRRHFDEVDERISTQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00519319;
90% Identity: iTF_00507025;
80% Identity: -