Basic Information

Insect: Drosophila kuntzei
Gene Symbol: -
Assembly: GCA_035042165.1
Location: JAWNLU010000534.1:1619600-1627550[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.5e-05 0.0019 18.7 2.1 1 23 273 295 273 295 0.97

2 18 8.3e-06 0.00062 20.2 0.4 1 23 301 323 301 323 0.97

3 18 0.0012 0.091 13.4 0.9 1 23 329 351 329 351 0.95

4 18 1.8e-05 0.0013 19.2 3.1 1 23 357 379 357 379 0.97

5 18 4e-05 0.003 18.1 4.7 1 23 385 407 385 407 0.99

6 18 7.3e-05 0.0054 17.3 5.7 1 23 413 435 413 435 0.97

7 18 3.6e-07 2.7e-05 24.5 4.3 1 23 441 463 441 463 0.98

8 18 1.3e-07 9.5e-06 25.9 2.4 1 23 469 491 469 491 0.97

9 18 7.5e-05 0.0055 17.2 6.7 1 23 498 520 498 520 0.97

10 18 0.00013 0.0096 16.5 6.5 1 23 526 548 526 548 0.98

11 18 1.2e-05 0.00086 19.8 4.5 1 23 554 576 554 576 0.98

12 18 8.4e-06 0.00062 20.2 8.1 1 23 582 604 582 604 0.98

13 18 6.8e-06 0.00051 20.5 7.6 1 23 610 632 610 632 0.97

14 18 7.7e-07 5.7e-05 23.5 7.7 1 23 638 660 638 660 0.98

15 18 0.00024 0.018 15.6 9.5 1 23 666 689 666 689 0.95

16 18 8.5e-05 0.0063 17.1 0.9 1 23 695 717 695 717 0.98

17 18 0.00093 0.069 13.8 3.4 1 23 727 749 727 749 0.97

18 18 1.1e-05 0.00079 19.9 1.6 1 23 755 778 755 778 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.5e-05	0.0019	18.7	2.1	1	23	273	295	273	295	0.97
2	18	8.3e-06	0.00062	20.2	0.4	1	23	301	323	301	323	0.97
3	18	0.0012	0.091	13.4	0.9	1	23	329	351	329	351	0.95
4	18	1.8e-05	0.0013	19.2	3.1	1	23	357	379	357	379	0.97
5	18	4e-05	0.003	18.1	4.7	1	23	385	407	385	407	0.99
6	18	7.3e-05	0.0054	17.3	5.7	1	23	413	435	413	435	0.97
7	18	3.6e-07	2.7e-05	24.5	4.3	1	23	441	463	441	463	0.98
8	18	1.3e-07	9.5e-06	25.9	2.4	1	23	469	491	469	491	0.97
9	18	7.5e-05	0.0055	17.2	6.7	1	23	498	520	498	520	0.97
10	18	0.00013	0.0096	16.5	6.5	1	23	526	548	526	548	0.98
11	18	1.2e-05	0.00086	19.8	4.5	1	23	554	576	554	576	0.98
12	18	8.4e-06	0.00062	20.2	8.1	1	23	582	604	582	604	0.98
13	18	6.8e-06	0.00051	20.5	7.6	1	23	610	632	610	632	0.97
14	18	7.7e-07	5.7e-05	23.5	7.7	1	23	638	660	638	660	0.98
15	18	0.00024	0.018	15.6	9.5	1	23	666	689	666	689	0.95
16	18	8.5e-05	0.0063	17.1	0.9	1	23	695	717	695	717	0.98
17	18	0.00093	0.069	13.8	3.4	1	23	727	749	727	749	0.97
18	18	1.1e-05	0.00079	19.9	1.6	1	23	755	778	755	778	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTATCAGCCCCGGTGGTGACCACTGGCGGTGGCACCACCATCACGTTAGGCGGACCGCCTGCATTACcacaatcaaataataataaagttgatCATAAAGAGGACGGCGGCAAGCATCAGCCGCCACACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCGCAGTTATTTACGTATCACGAGGTCTTTGGCAAAATCCATGGCGATGTGGTGAATCATGTGGCGGCGGTGCATGGCAGTCAGTTGCCACCGCCACAactgccaccgccaccgccactGCCACCGCAGACGACGCATTCGGCTAgcgcagctgcagcagcagcggcggcgtCCACAAATAATGCAGCCGTCGCTGCTGTAATGGCTTCGGCcaatgcagcagcagcggctgcAGCGGCCGCATCAGCAGCGGCATCagctcagcaacaacagcaacaacaacaacagcaacaacaacagcaacaacaacaacagcaacaacagcaatcagTGACAAGCACAAATGCTGGAAGCCAGCAGGGCAGCGCCACGGTGACCACGACTAGCTCAGGTAGCAACGGGAACAATAATAATGGGGGTAATAATgggggcaacaacaataataacaacaacaacaacaataataataataacaacaataataataataataattcgacAACGACGACGGGTGAATTGCTAATGCCGAAAATGGAGGGCGGCATTCATGGCGTCGATGGTCAGTCGAGCGTTTCGTTGGCGCCGGATGGCACGCCCATTGCGACTGGTACGCATGTGTGCGATATTTGTGGCAAGATGTTCCAGTTTCGTTATCAGCTGATTGTGCACCGTCGCTACCACAGCGAGCGCAAGCCGTTTATGTGTCAGGTGTGCGGTCAGGGCTTTACCACATCGCAGGATTTGACCCGTCATGGCAAAATCCACATTGGCGGTCCCATGTTCACCTGCATTGTTTGCTTCAATGTGTTTGCCAATAATACAAGTTTGGAGCGCCATATGAAAAGGCATTCAACGGACAAACCATTCGCCTGCACCATTTGCCAAAAGACTTTCGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCATCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTCACACGCAAGGAGCATTTGTTAAATCACGTGCGCCAGCACACGGGAGAGTCGCCGCATCGTTGCAGCTACTGCATGAAGACGTTCACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGTACATACTGCACGAAGACGTTTACCCGTAAGGAGCATCTAACGAATCATGTGCGACAGCACACGGGCGATTCGCCGCATCGTTGCAGCTACTGCAAGAAGACGTTCACCCGGAAGGAGCATCTGACGAATCATGTGCGCCTTCATACTGGAGATTCGCCCCACAAGTGCGAATATTGCCAGAAGACCTTTACACGCAAGGAGCATCTCAATAATCATATGCGTCAGCATTCAAGCGACAATCCCCATTGTTGCAACGTTTGCAACAAGCCCTTCACCCGCAAGGAGCATCTGATCAATCATATGTCACGCTGCCACACCGGTGATCGCCCCTTCACCTGCGAGACGTGCGGCAAGTCCTTTCCCCTCAAGGGCAATCTTCTGTTCCATCAACGCAGCCATACCAAGGGCCAGGAATGCGAACGTCCGTTTGCCTGCGAAAAGTGTCCCAagaatttcatatgcaaagGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGGGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCgtgcatccgcatccgcaaaTACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCACTCGGCGACGACAACAATGCACACCATACAACAGATTACAGCtggagcagctgcagctggagCCGGTGCCGTCCAGTTAACGCCCGGATTGGTGCCGCTGGTCACGAGCACGCTCATCTCGCACAATGCGCAGCAATCGCAGAAGCAACAGCaggcggcagcagcagttgctgccCAACAGcaagcggcagcagcagccgctgcaCAGCAAcaggcggcggcagcagcggccGCCCAGCAGCAGGCGGCAGCAGTGGCacatcagcagcatcagcaacaggttgctgcacagcagcaacaacagcaacagcaggcggcagtggcagcacatcagcagcagcaacagcagttgcagcagcaacaattgctgcaATTATCGATACAACAGGCGgcgcatcatcatcagcagcatcagcagcaacaacagcagcagcagcagcaacatcatcagcagcaacagcaacaggccCATCCACAGGCAccgccacagcagcaacaacagcaacagccaccGCCACAGGTGCCCATTGCATTGATAAGTGATCCAAGTGCATTGGCACGTGCTGccatgcaactgcaacatctGCCCACCAATGTTGAGCAACATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSAPSVVSAPVVTTGGGTTITLGGPPALPQSNNNKVDHKEDGGKHQPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPPPPLPPQTTHSASAAAAAAAASTNNAAVAAVMASANAAAAAAAAASAAASAQQQQQQQQQQQQQQQQQQQQQQSVTSTNAGSQQGSATVTTTSSGSNGNNNNGGNNGGNNNNNNNNNNNNNNNNNNNNNSTTTTGELLMPKMEGGIHGVDGQSSVSLAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLTPGLVPLVTSTLISHNAQQSQKQQQAAAAVAAQQQAAAAAAAQQQAAAAAAAQQQAAAVAHQQHQQQVAAQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQQHQQQQQQQQQQHHQQQQQQAHPQAPPQQQQQQQPPPQVPIALISDPSALARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00560429;
80% Identity: -