Basic Information

Insect: Drosophila kokeensis
Gene Symbol: -
Assembly: GCA_035042145.1
Location: JAWNLT010000264.1:16193754-16197901[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.8 1.8e+02 2.9 5.8 2 23 362 384 361 384 0.96

2 18 0.3 20 5.9 0.0 1 23 391 416 391 416 0.94

3 18 0.051 3.3 8.3 1.8 2 23 427 448 427 448 0.93

4 18 5.9 3.8e+02 1.8 3.0 2 17 459 474 458 485 0.75

5 18 0.037 2.4 8.8 0.2 3 23 518 538 516 538 0.94

6 18 0.00095 0.061 13.8 0.3 1 23 546 569 546 569 0.98

7 18 3.6e-05 0.0023 18.2 0.2 2 23 574 595 573 595 0.97

8 18 9.7 6.3e+02 1.2 0.0 1 19 603 621 603 623 0.76

9 18 0.00033 0.021 15.2 0.3 1 22 643 664 643 667 0.90

10 18 1.2 77 4.0 3.7 3 21 674 692 674 693 0.93

11 18 0.014 0.88 10.1 0.7 1 23 712 737 712 737 0.96

12 18 0.013 0.82 10.2 1.4 2 23 753 775 752 775 0.93

13 18 0.0072 0.46 11.0 0.5 2 23 781 803 780 803 0.92

14 18 0.0084 0.54 10.8 0.2 2 23 807 829 806 829 0.96

15 18 0.0001 0.0066 16.8 4.4 1 23 835 857 835 857 0.98

16 18 0.0063 0.41 11.2 2.8 1 23 861 884 861 885 0.93

17 18 8.3e-05 0.0053 17.1 2.0 1 23 890 913 890 913 0.97

18 18 0.0051 0.33 11.5 0.2 1 23 917 945 917 945 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.8	1.8e+02	2.9	5.8	2	23	362	384	361	384	0.96
2	18	0.3	20	5.9	0.0	1	23	391	416	391	416	0.94
3	18	0.051	3.3	8.3	1.8	2	23	427	448	427	448	0.93
4	18	5.9	3.8e+02	1.8	3.0	2	17	459	474	458	485	0.75
5	18	0.037	2.4	8.8	0.2	3	23	518	538	516	538	0.94
6	18	0.00095	0.061	13.8	0.3	1	23	546	569	546	569	0.98
7	18	3.6e-05	0.0023	18.2	0.2	2	23	574	595	573	595	0.97
8	18	9.7	6.3e+02	1.2	0.0	1	19	603	621	603	623	0.76
9	18	0.00033	0.021	15.2	0.3	1	22	643	664	643	667	0.90
10	18	1.2	77	4.0	3.7	3	21	674	692	674	693	0.93
11	18	0.014	0.88	10.1	0.7	1	23	712	737	712	737	0.96
12	18	0.013	0.82	10.2	1.4	2	23	753	775	752	775	0.93
13	18	0.0072	0.46	11.0	0.5	2	23	781	803	780	803	0.92
14	18	0.0084	0.54	10.8	0.2	2	23	807	829	806	829	0.96
15	18	0.0001	0.0066	16.8	4.4	1	23	835	857	835	857	0.98
16	18	0.0063	0.41	11.2	2.8	1	23	861	884	861	885	0.93
17	18	8.3e-05	0.0053	17.1	2.0	1	23	890	913	890	913	0.97
18	18	0.0051	0.33	11.5	0.2	1	23	917	945	917	945	0.87

Sequence Information

Coding Sequence: ATGtcggaaaatgaaaaaactgACGAAAATGTGCCTAGCTGCCTGCATTGCAGAGTGtacaattcaaaacaaaaatatcatgAGATATTCGACGAAGTCGGCATCGAAATAGGGCTCGCCAAACTCCTTGACAAGTATTTCGAGATAAAAGTTGAGCCCGCTGCCGGAAAACAGAAGCAATTGCTCTGCGAAGAGTGCGTTAATACGCTGATTCGTTTCTTCGACATCGACGAACTACAAAGGGAGCAAGATGCCGCAAATGCCGCAAATGCCGCGAATGTCGCAAATGTCGCAAAGAAAAAGCCCAGTAATGATACAAAGTCTTCTGCACCCAAAAAGGATGAGAATCCCACCAAAAAGCAGACAGCTGCCATGGGTGCACCAAACAACTCGGCGAATGCAGCCACAAAGCAAGAGAAGCCAACGGCGaatgctgctgcgactgttaCGTCTGATACTGCCCCTGATGCCATTGCAAAAGGAGCCCCAGAAGCCGCTAACATACGGATCACCAGAGCCAGGAACGCTCCGCCAAAAAGATTACCCATAAATAGAATGAAAGCAGTCAACCGAAGTGGAACCCTTAATGCCAAAGCAGGCGTCAAACGGCGTCGGTCCAGAGAAGCTGCTCAAGGATCAGGAGATCAGGAGCAGATTAGCGCACTCATACGTGACATTCTAGAGGACGTGGAGTCGCCAGCGGATGAAAAATTGGTAGAAGCGGCAGCCACAGTCCGTCAGCTAGAGAAACAATCAGCTGAAGAGCAACGGCAGCTGGAGGAGGCAGTGGAAAAGGAGCAAGCGGTGCTCGAGGACCAGGACAATAATGATGAGCTGGAGTTCGTGGTTGAGCGTGAAGATAGCTCTTCGGAATTGAGTGTGCGCCATTTCAAAGTGGAGCGAAAAATGAAACGCGCTCCTTCGCAGTCACAAAATGAGAGCCAAAGCGAGGATGAATCATTCAAAGTGGAGCCCTTTAATTTTGTGCTGATCAAGGAATCTGATAACATTGGCGATCTATACGAGTATTTGGGCAGCGTGGTGAAGACTTGTTTTGAGACATTGATATTTGACTGGGATACTGTGTGCCGCCACTGCTCGCTGAAGTGCAGCAAATATCAAAGTTTATTCGGTCACATGCTGAGGCGCCACAAGGAGCCGGGCGCGATTTACAAGTGCCCGATTACTGACTGCACGACAGAGCTAAAGGGAGCCAAATCTTTGGCCATGCACCTGGTTGTGCTGCATGCGCCGGTAGCCGATATACCCATTTATGGCAGTTGTCCCGAATGCAGCATGACCTTCTCAAACATATTGCAGTACAACAAGCACTCCTGCGCGCATGTCATCAAAAAGCGTCGCGGAATTCGTCTGTATTGTGAGATGTGCGGCTTGGAGTTCCCCTCCTGGAAGCGCTTTAATTTTCacaatcaatttcatttggagCGTCACAGGCCACGCGCCTGTTTTGTGTGCAGCTATGCAGATACCAACATCGATGAGCTGTTCCAACATTTGCACTACGCTCACGAGCCAGAGGGCACGCTGTTCTGTGATCTCTGTGATCGCAATTTTCGTGATCCTGTCGTCTTTGCGGAGCACAACAAATCACACTCAAATGTCAGCAGCACCACCTACACCTGCACCGAATGCAGCGCCAATTTTGAGTCACGTGGTCGTCTCAATGGACACTTGcGCACCGCACATGGCAGCGTTATCAGCTGCGAAATGTGCGGCCGCGAGTTTGCCACGGAGGCCACCTACAACCTGCACATGAAAACGCATTTGATTATAGAACGCGAGGTGCATGTGTGCAACAATTGCGGTCTGCTCAGCGAAAATAATGACAGGATGCTGGCTCATGTGGCGGATGAGGACTTGGGTTGCTTTGGCATGGATGTGGCAGTGGAAGTGATGCGTGATGCTTATGTTTGTGAGTACTGCTCCGCCTACTTTAAGCAGAAGAGTGATTTAAGCGCTCATCGCGATTCGGGCGTGCACAAGGATGGCCAGTTCTGGTGTCATCCTTGCCGCAAGAAGTTTTCCGATATGAAGCTCTATCGCCACCACTTGCGCAACTATCAACAATTGCGCACAGATTTTTCGCATCGCCGGCTAGAAATATGTCTCCACTATATGTGCGATTATGAGAATTGCACTGAGGCCTATATTAATTGGAACTCGCTTTATACCCACAAGCGGCGTACACACGATGCCGCTGAGAAGCAGGAGCCCAAGATGAAAGATAACGAATGGATCTGTCAGTTCTGTCAGAAAGTGTGCCGCTCCAAAATGTCGCTCTCGGTTCACGTAGCgcgcagccacaacaacaATAATATGGTTTGCTCGCTGTGCAAAGCTTCGTATAAGGATGAGGAGGCGCTTAAAAAGCATCACGCCTATTGGCATGAGCGCATAGAGTGTCCGATGTGCTTGAAGGTGGTGAAGAATCGGCGCAACTTTGACACCCACGTAAAGGTGGTGCACTCAAACAACAAGCGTTACACGTGCAGCGAATGCCAAAAAGGTTTCTATCACAAAAGCGAAATGGAGGCGCATCATCGGCTGCATTCGCAATCGTTTAAATGCGAGCAGTGCAACTTCACCACGAGGAACAAGAAATCGCTGTCGGTTCATGTGCTGGGTCAGCACCACAAGCGTTTTGCCTTCAAGTGTAAGTTCTGCGAAAAGCGCTTTGGACGCCGCCAGGGACTATCGAATCATATGCTACGTGTGCATGGCTCGAAGTTTACATGTCGTGACTTTTTCGATGGCGGTTGTGGCAAATCATTTGGGTCGACGGCACGGCTCAACGTGCATGTGCGAAAGGCGCATAACAGCAGCCTCTTTCTGTCCGGTGACCCAGCCAAACCGGAGGATAACgaagaggaggaagaggaggaggtgCCGGCTGTGGAGAATGCTGCACGCGAAGGTCCGTCCACTTCGAAGAAACGTTTAGTTCGCATCAATGCGAACACTGAGATCGAATTCATTGGCGATGCAGCAGAGGCCAATGACGACAATGAGCATCTGACTGATTCGGAAGTCTTCGATGAGTTGCAGGAGATCAAAGAACCAGCAAAGGCTCGGAAACGTTTGCGGAGTTTCGGGATATTaaaagcatcaacaacaaaaaaaaacgaatag
Protein Sequence: MSENEKTDENVPSCLHCRVYNSKQKYHEIFDEVGIEIGLAKLLDKYFEIKVEPAAGKQKQLLCEECVNTLIRFFDIDELQREQDAANAANAANVANVAKKKPSNDTKSSAPKKDENPTKKQTAAMGAPNNSANAATKQEKPTANAAATVTSDTAPDAIAKGAPEAANIRITRARNAPPKRLPINRMKAVNRSGTLNAKAGVKRRRSREAAQGSGDQEQISALIRDILEDVESPADEKLVEAAATVRQLEKQSAEEQRQLEEAVEKEQAVLEDQDNNDELEFVVEREDSSSELSVRHFKVERKMKRAPSQSQNESQSEDESFKVEPFNFVLIKESDNIGDLYEYLGSVVKTCFETLIFDWDTVCRHCSLKCSKYQSLFGHMLRRHKEPGAIYKCPITDCTTELKGAKSLAMHLVVLHAPVADIPIYGSCPECSMTFSNILQYNKHSCAHVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCSYADTNIDELFQHLHYAHEPEGTLFCDLCDRNFRDPVVFAEHNKSHSNVSSTTYTCTECSANFESRGRLNGHLRTAHGSVISCEMCGREFATEATYNLHMKTHLIIEREVHVCNNCGLLSENNDRMLAHVADEDLGCFGMDVAVEVMRDAYVCEYCSAYFKQKSDLSAHRDSGVHKDGQFWCHPCRKKFSDMKLYRHHLRNYQQLRTDFSHRRLEICLHYMCDYENCTEAYINWNSLYTHKRRTHDAAEKQEPKMKDNEWICQFCQKVCRSKMSLSVHVARSHNNNNMVCSLCKASYKDEEALKKHHAYWHERIECPMCLKVVKNRRNFDTHVKVVHSNNKRYTCSECQKGFYHKSEMEAHHRLHSQSFKCEQCNFTTRNKKSLSVHVLGQHHKRFAFKCKFCEKRFGRRQGLSNHMLRVHGSKFTCRDFFDGGCGKSFGSTARLNVHVRKAHNSSLFLSGDPAKPEDNEEEEEEEVPAVENAAREGPSTSKKRLVRINANTEIEFIGDAAEANDDNEHLTDSEVFDELQEIKEPAKARKRLRSFGILKASTTKKNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496807;
90% Identity: iTF_00496807;
80% Identity: -