Dkik004220.1
Basic Information
- Insect
- Drosophila kikkawai
- Gene Symbol
- stc
- Assembly
- GCA_018152535.1
- Location
- NW:8962983-8969159[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 1.5e+04 -4.1 1.6 15 19 396 400 395 400 0.81 2 14 0.048 3.5e+02 1.1 2.2 4 11 429 436 428 437 0.91 3 14 5.9e-07 0.0043 16.8 15.1 1 19 441 458 441 458 0.93 4 14 7.4e-06 0.054 13.2 8.6 1 19 494 512 494 512 0.95 5 14 2 1.5e+04 -6.3 3.9 7 13 516 522 516 523 0.74 6 14 3.5e-09 2.5e-05 23.9 13.6 1 19 552 570 552 570 0.98 7 14 2.4e-05 0.17 11.6 17.0 4 19 618 633 611 633 0.88 8 14 0.062 4.5e+02 0.7 11.7 1 11 673 683 673 695 0.79 9 14 4.8e-10 3.5e-06 26.6 15.5 1 18 700 717 700 718 0.97 10 14 1.7 1.2e+04 -3.9 0.9 6 10 747 751 747 752 0.81 11 14 2 1.5e+04 -9.0 11.5 10 18 765 774 754 775 0.71 12 14 2 1.5e+04 -4.4 1.5 9 13 781 785 780 786 0.79 13 14 1.1e-08 7.9e-05 22.3 10.9 1 17 811 827 811 833 0.89 14 14 5.3e-07 0.0039 16.9 13.6 1 19 843 862 843 862 0.96
Sequence Information
- Coding Sequence
- ATGGACGAGTACTGGCAGCAGCTGACCAACGGTGGCGTTCGTGGAGGAGCAGCCACCAATGGCCATGGTCACGAGGCAGCGGGGCAAGCGTCTGGCAGCAACGCCAGCGGAGCTActaccagcagcaacagcaacaacaactacgtGAACTTTAATCAGTTCATCCAACAGCACAACCTGGGCGGAGGATCATCGCCCACTGCCAGCGCGGGAACAATGCAGCATCCACTGAGCAGCGGAAATAACACGAACTACaacatcggcggcggcggaggagccTTTGGTCTGAATCCGCCAGTGGCTCAGCACGGGAATTCCAACAGCTTTGGGCATCTATATTCACAGCCCATGTTTCCATCGTACCAAAATGGCGATGGCGCCGCCTCCTTCTATGACGATACCTTTTCCAATCTGTACACACCGTTCGGCAACAATCCCTTTGATTTTAGCTCTTCCAAGCTGCAGGCCTCGGCCCCCGAATTTGTGCCCAATCTGGCCAAGTTAAGTCTGAACGAAGAGCCGGCCACGACGCCAAACGGGAACAGGAATATCACTGCCAGCCAAGAAACTGCCATTAGTGTGACGGGAACAAGGGCGCCACAACCGGGAGGAAACGGTGGATCAGGAGGAGGCGAGCCCCACCATCTTCGTTTATCCGCCAACAATTACGAAAGAGATCGCGGCGACAGGGACTCGAGGCCGGGAAGCACCAGGCAGCAGCGTCGCTCCGACTACCGCGATGACCGCGAGGATCGATATGAGCGAAACGATCGCAAGAAGCCCCAGAAGCAGCAGCGCTACGACAATCATAGAAGCAACAAACGAAGGGACGACTGGAATCGCAACCGGGACCGCATTAACGGCTTTCCTCGAGCTGCCGACGAGCTGGACACCAGCAACGAGAGTGCTCAGCCATCGCCCGAAAAGCAGCAAACgactcagcagcagcagcaaatctCCCCGCGGAGAGCTCCACCGCCTCCGCCGGCGGCGGATAATGAGAAGCTATCGCAGCGGGAGAAACTTATACGCGATATCGAGCAGCGGCGGCTGGAGTGTCTGGTGTGCGTGGAGGCGATCAAGGCGCACCAGCCGACGTGGTCCTGCCAGAACTGCTACCACGTTCTCCACCTCAAGTGCACTATTACGTGGGCGAGCAGCTCCAAGTCTGATGTGGGCTGGCGGTGCCCCGCCTGTCAGAATGTCCTCCAAGAGCTGCCGCGCGAGTATCTCTGCTTTTGTGGAAAACTGAAGAACCCGCCGGTGTCTCGTACAGAATTGGCGCACAGCTGCGGAGAGGTATGTTGCCGGATCGAGGGCTGTAGCCATGCTTGCACACTTCTATGCCATCCGGGCCCCTGTCCGCCGTGCCAGGCCAATGTGGTGCGCAGCTGTGGTTGCGGCCGCAGCTCCAAGACGATGCAGTGCGCCATGAAAGAGGATCTCCTCTGCGGCGAGATCTGTGACAAAGTGCTAAACTGTGCCGAGCATCGGTGTCGCGCCGAGTGTCATGCGGGCAAGTGTGCCGCTTGCTCGGAGCAGGTGGAGCAGCACTGTCACTGCGGCAAACAGGAGCGTCAGGTACAGTGTACGCGCGAGAACCAGGACAAGCGGAGCTACTCGTGCAAGGAGAGTTGCGGGAAGCCTCTGCCCTGCGGCAATCACAAGTGCAAGGACTCGTGTCATGCAGGCAGTTGTAGGCCTTGCAAACTCAGTCCCGAACAGATAACCAGCTGCCCTTGCGGTAAGATGCCCGTGCCGGCTGCCCAACGCTCGAGCTGCCTGGATCCCATACCAACCTGCGAGGGAATCTGTTCGAGGACGCTGCGTTGTGGCAAGCCAGCTCATCCCCATCAATGCGCCAGTAAGTGCCACCTGGGTCAGTGTCCGCCGTGCCCCAAGCAAACGGCCGTCAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGCCAACTGTCCACGAGGGCGGATGATGCTCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAGTGTAATGCCGAGTGCTGCATCGACATCGATCATGCCTGCCCGCTGCCCTGCAACCGGACGCTGAGCTGCGGCAAGCACAAATGCGATCAGCCCTGCCATCGAGGCAACTGTCCGCCCTGTTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGTGGAGCCGAAGTGATATATCCGCCGGTTCCGTGCGGCACGAAGAAGCCGCTTTGCAAGCGACCCTGCTCGCGATCGCATCCCTGCGAGCATCCGCCGCAGCACAACTGCCACTCGGCGGCCACCTGTCCGCCCTGCATGATGTTCACCACCAAGTTCTGCCACGGTGGTCACGAGCAGCGCAAGACTATTCCCTGCTCTCAGGCCAATTTTAGCTGTGGTTTGGCGTGTGGCAAGCCCTTGCCCTGCGGCCGTCATAAGTGCATCAAGCCCTGCCACGAAGGCGCCTGTCAGAGTGCCGGTGAGGTGTGTCGTCAGAGCTGTACAAAGCCACGAACACTCTGTGGCCATAAGTGTTCCGCTGCCTGTCATGAGGGCGCCTGTCCTGAGACGCCGTGCAAGGAGCTGGTGGAGGTTCAGTGTGAATGCGGCCACCGGAAGCAGAGTCGCAGCTGCCAGGAGCTGGCCAGGGAGCATAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCACGCGGCAATTACATGGAGCTAAGCGAAATCCTGGCTCCGGCCAAGACCAGCAAATCGAACCGAACTTTGGACTGCAACGATGAGTGCCGCCTGCTGGAGCGTAATCGTAGGTTAGCCTCTGCCCTGTCATCGGGCAACCCGGACACAAAGCAAAAGTCACTGACCAAATACTCGGAGTTTGTTCGGGGATTTGCCAAGAGGAATCCGGCTCTGACCAAGAGCGTGTACGAGACGTTGAGCGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGGAGCCACTCCTTCCCCACGATGAACCGCGAGAAGAGGCAATTGGTGCACGAGCTGTGCGAGATATTTGGCATCGAGTCGGTCTCCTACGACAAGGAACCTAATAGGAATGTTGTGGCCACGGCCCACAAGGAGAGGTGCTGGCTGCCTGCCACAAGCATCATGGAGGTGCTGGCTCGTGAGTCTGGACAACGTCGAGTCCCGGTGCCCAGCAACAATGCATGGAGCTTGAAGAAATAG
- Protein Sequence
- MDEYWQQLTNGGVRGGAATNGHGHEAAGQASGSNASGATTSSNSNNNYVNFNQFIQQHNLGGGSSPTASAGTMQHPLSSGNNTNYNIGGGGGAFGLNPPVAQHGNSNSFGHLYSQPMFPSYQNGDGAASFYDDTFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLSLNEEPATTPNGNRNITASQETAISVTGTRAPQPGGNGGSGGGEPHHLRLSANNYERDRGDRDSRPGSTRQQRRSDYRDDREDRYERNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKQQTTQQQQQISPRRAPPPPPAADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEDLLCGEICDKVLNCAEHRCRAECHAGKCAACSEQVEQHCHCGKQERQVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMMFTTKFCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGACQSAGEVCRQSCTKPRTLCGHKCSAACHEGACPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKSNRTLDCNDECRLLERNRRLASALSSGNPDTKQKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00489062;
- 90% Identity
- iTF_00489062;
- 80% Identity
- -